| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,396,772 | T→C | F236F (TTT→TTC) | amiB → | N‑acetylmuramoyl‑L‑alanine amidase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,396,772 | 0 | T | C | 98.3% | 190.8 / ‑6.9 | 58 | F236F (TTT→TTC) | amiB | N‑acetylmuramoyl‑L‑alanine amidase B |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (23/34); total (24/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCCGTTTAAAACGGAAAGTAACCGCACTACGGGTGTTATCAGCAGTAATACGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGAT > NC_000913/4396541‑4397006 | tCCGTTTAAAACGGAAAGTAACCGCACTACGGGTGTTATCAGCAGTAATACGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGGACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTg > 1:190048/1‑251 (MQ=255) gattAAAACGGAAAGGATCCGCCCTACGGGTGTTATCAGCAGGAATACGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACg < 2:298535/249‑1 (MQ=255) ttAAAACGGAAAGTAACCGCACTACGGGTGTTATCAGCAGTAATACGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGGGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGGTTTAACCCGTGACggg > 1:199146/1‑251 (MQ=255) aaaCGGAAAGTAACCGCACTACGGGTGTTATCAGCAGTAAGACGGTAACGCGGCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTTGTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCTGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGAt < 1:448534/251‑1 (MQ=255) ggAAAGTAACCGCACTACGGGTGTTATCAGCAGTAATACGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGGGGAAAATGTCACCATCGCCATCGCGCGTAAATTTCGTACTTTGCTCCATGAAGATCCGATGTTCCAAGGGGTTTTTACCCGTGACGGGGGTTACt > 2:223963/1‑251 (MQ=255) ggAAAGTAACCGCACTACGGGTGTTATCAGCAGTAATACGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGGACGCGGGAGAAAAATTTCACCATCGCCATCGCGCGTAAATTGCGTACTTTTCTCAATGTCGATCCGATGTTCAAAGGCGTTTTACACCGTGACGGGGAATACt > 1:115689/1‑251 (MQ=255) aaGTAACCGCACGCCGGGTGTTATCAGCAGTAATACGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGAGCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACGTTTCTTAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTa < 1:331925/251‑1 (MQ=255) aCCGCACTACGGGTGTTATCAGCAGTAATACGGTAACGCGTCCGGCAGCGCCCGCGACGGCTAACACTGGCGATAACATTATCATCGCAATTGATGCCGGACACGGCGGGCAGGAACCTAGCGCTATCGGCACCCGG‑GGGACGCGGGGGAAAAATGACACCCTCGCCATCGGGCGCAAACTGAGTACATTGCTCAAAGCTGCTCCGAAGTGCGAAGGGGGTTTAACCCAGGACGGGGATTACTTTAtcc > 2:456435/1‑248 (MQ=255) aCCGCACTACGGGTGTTAGCAGCAGTAATACGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGAGAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCg < 1:304115/251‑1 (MQ=255) aCTACGGGTGTTATCAGCAGTAATACGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGAt < 1:481024/251‑1 (MQ=255) aCGGGTGTTATCAGCAGTAATACGGTAACGCGGCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTAGTGATGCCGGACACGGCGGTCAGTACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGGTGTAACCCGTGACGGGGATTACTTTATCTCGGTGATgg < 2:203468/250‑1 (MQ=255) tCAGCAGTAATACGGTAACGCGTCCGGCAGCGCGCGAGACGGCTAAAACTGACGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGGGGGACCCGGGAGAAAAATTTCACCAACGCCCTCCCGCCGAAATTGAGGACCTTTCTCCATTACGAACCGATGTTTAAAAGCGGTTTTACCCGTGGAGGGGTTTTCGTTATCTCGGGGAAgggggacaggg > 2:337523/1‑242 (MQ=255) aCGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTaa < 1:223963/251‑1 (MQ=255) aCGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTaa < 1:425309/251‑1 (MQ=255) cGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGGTTACTTTATCTCGGGGATGGGGCGCAGTGATGTGGCACGTa > 1:494000/1‑249 (MQ=255) gTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTAGTACGCGGGAGGAAAAAGTCACCATCGCCATCGCGCGTAAATTGCGTAATTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGGGATGGGGCGCAGAGATGTGGCACGTAAGCAAAACGcc > 1:398762/1‑251 (MQ=255) ccGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCaa < 1:187582/251‑1 (MQ=255) cAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTc < 1:503659/251‑1 (MQ=255) gcgcgACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCgtg < 1:523048/251‑1 (MQ=255) gcgcgACGGCTAACACGGGCGATAAAATTATCAGCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCgtt < 1:523060/251‑2 (MQ=255) cgcgactgtgaaCACTGGCTATAAAATAACCATCGCGATTGATGCCGGACACGGCGTTCAGGACCCTGGCGCTATCGGC‑CCTGGTGGTACGCGGAAGAAAAAGGGCACCAGCGCCATCGCGCGGAAATTGCGTGCTTTGCTCAATGACGAGCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCgtgt < 2:4228/241‑1 (MQ=255) gcgaggtatAACACTGGCGATAAAATTATCATCGCTATTGACGCCGGACACGGGGGTCAGGCCCCTGGCGCTATCGGC‑CCTGGTGGTACGCGGGAGGAATATGTCACCGTCGCCATCGCGCGTAAATTGCGTGCTTTGCTCAATGACGATCCGATGTTCAAAGGCGTGTTAACCCTTGACGGGGATTACTTTATCTCGGTGATGGGGCGGAGTGAAGTGGCACGGAAGGAAAACGCCAAtgtcaccgtgtc < 2:68323/243‑12 (MQ=255) gcgACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTc < 1:456089/251‑1 (MQ=255) cgACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCg < 1:64465/251‑1 (MQ=255) gACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGGACGCGGGAGAAAAATGACACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATTTTCAAAGGCGTTTTAACCCTTGACGGGGATTACTTTATCTCGGTGATGGGGGGCAGTGATGTGGCACGGTAGCAACACGCCAATTTCCTCGTGTCg > 2:396592/1‑250 (MQ=255) ggCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGAt < 1:311838/249‑1 (MQ=255) ggCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGc < 1:478107/251‑1 (MQ=255) aaTTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGGGAAAAATGTCACCATCGCCCTCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGGTGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGGGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCg > 1:343214/1‑250 (MQ=255) gcacagcgctagtgatgctgggatcggcggGCAGGACCCTGGCGCTTACGGC‑CCCGGGGGGACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGAGCCGATGGTCAAATGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAAc < 2:157625/226‑1 (MQ=255) catcGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCa < 1:239150/251‑1 (MQ=255) tATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCTGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCg > 1:144361/1‑250 (MQ=255) actgctgcgggACACGGCGGTCGCGTTCCTGGCTCTACCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAAAGTCGATCCGATGTTCAAAGGCGTTTTAGCCCGTGACGGGGATTACTTTAGCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCg < 2:180787/240‑1 (MQ=255) gTCAGGACCCTGGCGCTAGCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGAGGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTg < 2:494000/251‑1 (MQ=255) ccgggaccTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCCCCATCGCCATCGCGCGGAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCGCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGTGTGCTCTCTaa < 2:287550/244‑1 (MQ=255) ccTGGCGCTATCGGC‑ACCGGGGGTACGCGGCAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGAACCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTTCGACTGGCGGTTCCGTATGGGTGcatgcta > 2:295840/1‑244 (MQ=255) tgcgcTAGCGGC‑CCCTGTGGCACGAGGGAGAAAAATGTCACCCTCGCCATCGCGCGTAAATTGCGTACTTCGCTCAATGACGAGCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAGCGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCGCCGACCCGCAGTTCGACTGGCGCTTTCGTATGGGTGCTCTCTAAcc < 2:229287/249‑1 (MQ=255) tttacggctccggcagtacctgggAGAAAAATGTCCCCATCGCCATCGACCGTAAAGGTCGTACTTTGCTCAATGACGATCCGATGGTCAAAGGCGTTTTAACCCGTGTCGGGGATTACGTTATCTCGGTGATGGGGCGCATTTATGGGGCACGTAAGCAAAACGCCAATTTCCGCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCTACTGGCGCTTCCGTATGTGGGTGCTCTAACCGTc < 2:327608/228‑1 (MQ=255) cGGC‑CCCGGTGGTACGCGGGAGAAAAATGACACCATCGCCATCGCGCGTAAATTGCGTACTTTGCGCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCa < 1:518840/251‑1 (MQ=255) ggccccgtaggcaCGCGGGAGAAAAATGGCACCCTCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGTGGCGCAGTGATGTGGCACGTAAGCAAAACGCCCATTTCATCGTATCGGTTGACGCTGTTGGCGCACCGATCCGACGTGCGCGAGACGCTTCCTTATGGACGCTCTCTCACCGTCGCGCCac > 2:540357/13‑250 (MQ=255) gcgGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCa < 1:502064/251‑1 (MQ=255) aaaaTGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAACCGCCAATTTCCTCGTGTCGATTCACGCTGCTGCCGCCCCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACCGTGTAATGGCCAgttggctg > 2:76639/1‑251 (MQ=255) atcgccatcgcGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACg > 1:544599/1‑250 (MQ=255) ccatcgtGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGt > 1:139028/1‑206 (MQ=255) ccatcgtGCGTAAATTGCGTACTTTGCGCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGt < 2:139028/206‑1 (MQ=255) cgcgcgTAAAGTGCGTACTTGGCTCAATGACGCGCCGATGTTCAAAGTCGGTATATCCCGGGACGGGGATTACTGTATCTCGGTGATGGGGCGCAGTGATGTGGCCCGGAAGCAAAACGCCAATTTCCTCGGGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACTAGAAACAg < 2:545072/250‑1 (MQ=255) aTTGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAgctgc < 2:199146/251‑1 (MQ=255) ttGCGTACTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAgctgct > 1:196572/1‑251 (MQ=255) aCTTTGCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACAGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCtgggtgg < 1:104532/251‑1 (MQ=255) gCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCgg > 1:425975/1‑251 (MQ=255) gCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCgg > 1:318682/1‑251 (MQ=255) gCTCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCg < 1:414218/250‑1 (MQ=255) tCAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGGTTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAAACGCAGTGCGACTGGCGCTTCCTTATGGGTGCTCTCTAACCGGCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGGACTGCTGTGTGGGGCgggg > 1:284506/1‑250 (MQ=255) cAATGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTg < 1:344403/251‑1 (MQ=255) aaTGACGATCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGCTGGGGCGCAGTGATGTGGCACGTAAGCCAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGACGCACCGAACAGAAGTGCGCCTGGCGCTTCCGTATGGGTGATCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTAGAGCTCAACGAGAAACAGGCGGAGCTGATGGGTgggggggggtg > 2:23672/1‑248 (MQ=255) aaTGACGATCCGATGTTCAAAGGCGTTTTAACCCGTAACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGCCTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCCGGCAGGCGCACCACGACAAACAATCGGAGCTTGTGAGTGGGGCggggt > 2:120060/1‑248 (MQ=255) aTGACGATCCGATGTTCAAAGGCGTTTTAACCCGAGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCAAGAGAAACAGTCGGAGCTGCTGGGTGGGGCggggggt > 1:156815/1‑247 (MQ=255) aTGACGATCCGATGTTCAAAGGCGGTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGATGCTGGGTGGGGCGGGTGAt < 1:490719/251‑1 (MQ=255) aTCCGATGTTCAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGCGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTAACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGCGCTCTCTAAcc > 1:299281/1‑168 (MQ=255) | TCCGTTTAAAACGGAAAGTAACCGCACTACGGGTGTTATCAGCAGTAATACGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGC‑CCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGAT > NC_000913/4396541‑4397006 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |