Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,696,157	G→T	P10H (CCT→CAT)	yhjR ←	PF10945 family protein YhjR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,696,157	0	G	T	100.0%	143.2 / NA	46	P10H (CCT→CAT)	yhjR	PF10945 family protein YhjR
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (15/31);  total (15/31)

GACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCAGGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTAAAAACGAAAAGACTAAAATCACACGTCTTGTGACCTTCTAAATTGATTCACATGCTAAATCTGATAAGTTTTAATTTCAATGG  >  NC_000913/3695912‑3696403                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                       gACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACCCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCaga                                                                                                                                                                                                                                                   <  1:44216/251‑1 (MQ=255)       gCTATTGCGGCGGTGATGGTTGTTTTCCCCACGCCTCCCCTCACCCCCGGCTATCCCAGTACGGCCATTCACCAATCCCCTACGTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTGTAATGCCGCGGCCAACGGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCATAGTATcg                                                                                                                                                                                                                                             <  2:234968/251‑2 (MQ=255)       gCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCATCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCt                                                                                                                                                                                                                                             <  1:387038/251‑1 (MQ=255)             gcggcgGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCa                                                                                                                                                                                                                                       <  1:195296/251‑1 (MQ=255)                   gTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGttt                                                                                                                                                                                                                                 >  1:2878/1‑250 (MQ=255)                            gttgtCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCAtttt                                                                                                                                                                                                                         <  1:235383/250‑1 (MQ=255)                                   ccccGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCTTTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATc                                                                                                                                                                                                                 <  2:277781/248‑1 (MQ=255)                                   ccACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATc                                                                                                                                                                                                                 >  1:225676/1‑251 (MQ=255)                                        ccTCCCCGCACCCCCTGCTATCCCAGTACGGCCAGTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTGTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGACTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTAt                                                                                                                                                                                                            <  1:306360/251‑1 (MQ=255)                                               ccACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATaa                                                                                                                                                                                                     <  1:108524/250‑1 (MQ=255)                                                cccccccTGCTACCCCAGTACGGCCATTCACCCATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCATCGTTTTAAGGCCTCTGCCAACTGTACGCGTTGGGAAATAACGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGTAATATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAac                                                                                                                                                                                                    <  2:42498/249‑1 (MQ=255)                                                 aCCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAacc                                                                                                                                                                                                   <  1:375230/251‑1 (MQ=255)                                                        gCTAACCCAGTACTGCCATACACCAATCCCCTGCTTTTGTGTCGCAAACGCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTTAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAaccgtacc                                                                                                                                                                                              <  2:472306/249‑1 (MQ=255)                                                            tCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCAt                                                                                                                                                                                        >  1:486188/1‑251 (MQ=255)                                                                   aCGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACa                                                                                                                                                                                  >  2:20784/1‑250 (MQ=255)                                                                     ggCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATc                                                                                                                                                                                                                                              >  1:41238/1‑188 (MQ=255)                                                                     ggCCATTCACCAATCCCCTACGTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATc                                                                                                                                                                                                                                              <  2:41238/188‑1 (MQ=255)                                                                      gCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTc                                                                                                                                                                              <  1:154372/251‑1 (MQ=255)                                                                              caatcccccTA‑TTTTGTTGCCCAAACCTTGCCAGCAAGGGCCAGCGTGTTAAAGCCGCGTCTAACTGTTCGCGTTGGGAAATATCGGCCTAATCAATATCAGGCAGTGAAAATGCCTGCGTGAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATGCACTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGa                                                                                                                                                                     <  2:402053/246‑1 (MQ=255)                                                                               cAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGa                                                                                                                                                                     <  1:243150/251‑1 (MQ=255)                                                                                               ttgCGCAAACTCTGACAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGttt                                                                                                                                                      >  2:416002/1‑250 (MQ=255)                                                                                                                      gCCAGCGTTTTAATGCCGCGTCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGTAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTGTACGGCGAGACGGGAAtt                                                                                                                              <  1:125713/251‑1 (MQ=255)                                                                                                                        cAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTg                                                                                                                            <  2:147595/251‑1 (MQ=255)                                                                                                                                              aCTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGCCTTTCCGtt                                                                                                       >  2:541376/1‑250 (MQ=255)                                                                                                                                                 ggtCGCGTGGGGAAATATCGGCATAATAAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCAGTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGTGCATTTCGCCTGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACg                                                                                                    <  2:238602/248‑1 (MQ=255)                                                                                                                                                 gTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTAc                                                                                                     <  1:416002/249‑1 (MQ=255)                                                                                                                                                    cgcgTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAAc                                                                                                <  1:522806/251‑1 (MQ=255)                                                                                                                                                         tGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACGTTTTGACTTTCCGTTACGCAACAGaa                                                                                            <  1:146772/250‑1 (MQ=255)                                                                                                                                                          gggAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGaaa                                                                                           <  1:445341/250‑1 (MQ=255)                                                                                                                                                               atatCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGtt                                                                                      >  1:313042/1‑250 (MQ=255)                                                                                                                                                               atatCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTa                                                                                     <  1:502840/251‑1 (MQ=255)                                                                                                                                                                     gCATAAGCAATATCAGGCATTGAAAATGCCTGCTTTAACGCCACAATAACATTCTGGAAGATATAGCCTATCTCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGGCGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTAAAAACg                                                                               <  2:238214/251‑1 (MQ=255)                                                                                                                                                                         aaTCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTAAAAACGaaa                                                                            >  1:374742/1‑250 (MQ=255)                                                                                                                                                                                              aTGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCTCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTAAAAACGAAAAGTCTAAAATCACACGTCTtgt                                                      <  2:286084/251‑1 (MQ=255)                                                                                                                                                                                                         aaCGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTAAAAACGAAAAGACTAAAATCACACGTCTTGTGACCTTCTaa                                            <  1:24182/250‑1 (MQ=255)                                                                                                                                                                                                          aCGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTAAAAACGAAAAGACTAAAATCACACGTCTTGTGCCCTTCTAAAt                                          >  2:521001/1‑251 (MQ=255)                                                                                                                                                                                                           cGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTAAAAACGAAAAGACTAAAATCACACGTCTTGTGACCTTCTAAAtt                                         >  1:154917/1‑251 (MQ=255)                                                                                                                                                                                                            gCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTAAAAACGAAAAGACTAAAATCACACGTCTTGTGACCTTCTAAATTg                                        <  1:531979/251‑1 (MQ=255)                                                                                                                                                                                                                             gAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTAAAAACGAAAAGACTAAAATCACACGTCtt                                                        >  1:367780/1‑218 (MQ=255)                                                                                                                                                                                                                             gAAGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTAAAAACGAAAAGACTAAAATCACACGTCtt                                                        <  2:367780/218‑1 (MQ=255)                                                                                                                                                                                                                              aaGATATAGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTAAAAACGAAAAGACTAAAATCACACGTCTTGTGACCTTCTAAATTGATTCACATGCTAAATCTg                      >  1:218098/1‑251 (MQ=255)                                                                                                                                                                                                                                   ataGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTAAGCATTTCGCCGGTTTATTGTTTACGGCGAGCCGGGAATTTGCTCACTTTTTGTCTTTCCGTTACGCAACAGAAAAAGTTAAAAACGAAAAGACTAAAATCACACGTCTTGTGACCTTCTAAATTGATTCACATGCTAAATCTgtt                    >  2:232681/1‑246 (MQ=255)                                                                                                                                                                                                                                   ataGCCTATCGCGGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTAAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTAAAAACGAAAAGACTAAAATCACACGTCTTGTGACCTTCTAAATTGATTCACATGCTAAATCTGAt                    <  1:232681/248‑1 (MQ=255)                                                                                                                                                                                                                                             gcgGGATCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTAAAAACGAAAAGACTAAAATCACACGTCTTGTGACCTTCTAAATTGATTCACATGCTAAATCTGATAAGTTTTAATTTc       <  1:297105/251‑1 (MQ=255)                                                                                                                                                                                                                                              cgGGATCATGCAGAGTATCTTGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTAAAAACTAAAAGACTAAAAACACACGTCTTGTGACCTTCTAAATTGATTCACATGCTAAATCTGATAAGTTTTAAt          <  1:38695/247‑1 (MQ=255)                                                                                                                                                                                                                                                  aTCATGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTAAAAACGAAAAGACTAAAATCACACGTCTTGTGACCTTCTAAATTGATTCACATGCTAACTCTGATTAGTTTTAATTTCAATgg  >  2:260202/1‑251 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                       GACCAGGCTAATGCGGCGGTGATGGTTGTTGTCCCCACGCCTCCCCGCACCCCCTGCTATCCCAGTACGGCCATTCACCAATCCCCTACTTTTGTTGCGCAAACTCTGCCAGCAACGGCCAGCGTTTTAATGCCGCGGCCAACTGTTCGCGTTGGGAAATATCGGCATAATCAATATCAGGCAGTGAAAATGCCTGCTTTAACGCCACAATATCATTCTGGAAGATATAGCCTATCGCGGGATCAGGCAGAGTATCTGGTTCATTGTTATTCATTTTGCTTGATCCCTATGAAATAACCGTACCGTTCATGAGACAATTCTAACCGTGAGCATTTCGCCGGTTTATTGTTTACGGCGAGACGGGAATTTGCTCACTTTTTGACTTTCCGTTACGCAACAGAAAAAGTTAAAAACGAAAAGACTAAAATCACACGTCTTGTGACCTTCTAAATTGATTCACATGCTAAATCTGATAAGTTTTAATTTCAATGG  >  NC_000913/3695912‑3696403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑