| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,560,443 | C→G | intergenic (+577/+179) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,560,443 | 0 | C | G | 91.1% | 153.7 / 11.2 | 57 | intergenic (+577/+179) | rtcR/glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| Reads supporting (aligned to +/- strand): ref base C (1/4); new base G (23/28); total (25/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.33e-01 | |||||||||||
AATGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGT‑TGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGC‑CAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCG > NC_000913/3560193‑3560685 | aaTGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGT‑TGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCCGCGCCGCAc > 2:544127/1‑251 (MQ=255) gatgCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGT‑TGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCATCGCCGCAgcgc > 1:73728/1‑251 (MQ=255) gAAAATCTTCTTTTACCATCAACGTGTGAGCAACGT‑TGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGCTAAACAGCGTCGAGCCCTTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGCTCGTGCCACGGCGTGTTCACCGAACTGGTAGGCGGCGCCGCGGCGCCatgg > 2:102565/1‑250 (MQ=255) tttACCATCAACGTGTTAGCAACGT‑TGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTCCCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGcgcag < 1:236161/248‑5 (MQ=255) tacaatcagcgggtTAGCAACGTGTG‑GAGTGTTGGTGACAAGGCGAAAATTGCTGTGAGTGAGCTGGGGCTGCGCTACCGCTTCCGGCGTGGGGCCGATAACGATAAACGGCGTCGGGCTATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATc < 2:125171/238‑1 (MQ=255) aCCATCAACGTGTTAGCAACTT‑TGAGTTTTTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCa < 1:419508/250‑1 (MQ=255) ccaacaccGTGTTAGCAACGT‑TGAGATTGTTGGTGACAATCCGCAATTTGCTGTGATTGAGCAGTGCGTCCGCTACCGCTTCCGGCGCGCTGCCGATATCGATACACAGCGTCGAGCCATTGGGGA‑TTGGCTCCGCCACGTTGCTGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGAGCCACGGCGTGTTAACCGAACCGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAgg < 1:469455/244‑1 (MQ=255) aTCAACGTGTTAGCAACGT‑TGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTACGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGtt > 2:355374/1‑251 (MQ=255) tCAACGTGTTAGCAACGT‑TGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCCGCGCCGCAGCGCCATGATGGCGCAGGATCAGGttt > 2:156461/1‑251 (MQ=255) cGTGTTAGCAACGT‑TGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCt < 1:243105/251‑1 (MQ=255) gtgtTAGCAACGT‑TGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTc > 1:93170/1‑251 (MQ=255) aGCAACGT‑TGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGTCGCAGGATCAGGTTTTGCTCCGccc > 1:179540/1‑250 (MQ=255) gagaTTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCCTGCTGGCGCAGGATCCGGTTTTGCTCCGCCAGCTCATTg > 2:347638/1‑250 (MQ=255) aTTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGCACTGGAATGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTgcggg > 2:233906/1‑247 (MQ=255) tGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGAGGGCGATGCGCTCTTTTTCTTCGGTATGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGCAGGCAGCGCCGCAGCGCCATGATGGCGCAGGAACAGGTTTTGATCCGCCAGCCCATTGAGG‑Tagcgccg > 2:373265/1‑247 (MQ=255) tGACAATGCGCAAATTGCTGTGATTGAGCAGGGCGTGCGATACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCCTTGGGGA‑TTTGCTCCGCCACTTCGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTACCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCCGCGCCATGATGGCGCAGGATCATGTTTTGCTCCGCCAGCTCAT‑GAGGGTCgcggcg > 2:263970/1‑250 (MQ=255) ggATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCAATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGga < 1:200101/250‑1 (MQ=255) gATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACgg > 1:205292/1‑249 (MQ=255) ccGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGCTCGTGCCACGGCGTGTTAACCGCACTGGAAGGCAGAGCCGCAGCGCCATGATGGCGCAGGCTCAGGTTTTGCTCCGCCCGCTCATTGGGG‑TCGGGGCGAATAGTCTGAGGGGTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTg > 2:320456/1‑251 (MQ=255) ggtggtgCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACAt < 1:324521/250‑1 (MQ=255) gtgCCGATCTCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAAcc < 1:431887/251‑1 (MQ=255) cGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGTTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCctgc > 1:363557/1‑251 (MQ=255) cGATAAACAGCGTGGAGCCATTGGGGA‑TTTGCCCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTa < 1:210637/251‑1 (MQ=255) aaaCAGCGTCGCGCCATTGGGGA‑TTTGCTCCGCCACTTTGAGGGCGATGCGCTCTTTTTCTTCGGTCTGGGCGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGGAGGCGGCGCCGCAGCGCCATGCTGGCGCAGGATCAGGTTTTACTCCGCCCGCTCATTGAGG‑TCGCGGCGACTACTCTGCGGGCTGGCGGTGACATGCTCTAACAGCTATTCGGATCTGCTCTAACCCTGCTGTTTAAcc > 2:529087/1‑250 (MQ=255) ccgtggtcgtcatgtGGGGT‑TTTTCTCCGCCACCTGGCGGGTGATGAGCTCTTTTTTTGCTGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGATG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTGCGGTACTGACATAACCCTTCTGTTTAACCAGtg < 2:17354/237‑2 (MQ=255) ggctgggttcagtGGGGAGTTTGCGCGGCCACTTTGGGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGACCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTc < 2:420356/239‑1 (MQ=255) gAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGataat < 1:56180/251‑1 (MQ=255) cctttGGGGT‑TTTGCCCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTGCGTGCTGGGTGGCCT‑TGCGTTCGTGCCACGGCGTGTTACCCGAACTGGAAGGCTGCGCCGCACCGCCATGATGGCGCAGGATCAGTTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAc‑c < 1:233512/248‑1 (MQ=255) ccATTGGGGA‑TTTGCTCCTCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGaaaatccccaatgg < 2:61781/203‑12 (MQ=255) ccATTGGGGA‑TTTGCTCCTCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGaaaatccccaatgg > 1:61781/1‑192 (MQ=255) ccATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAc‑c < 1:363787/251‑1 (MQ=255) tGCTACGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGtt < 1:355374/250‑1 (MQ=255) gccccgccgCTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTtg < 1:389998/247‑1 (MQ=255) cagcggcattgtgtgggCGGTGCTCTTTTTGTCTTCGGTCTGG‑TGGGCTCTGCGCTCGGCCCAGGGCGTGTTAACTGACTTTGAAGGCAGCCCCGCACCGCCAGGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTtgtg < 2:395182/237‑1 (MQ=255) cgccccgttGCGGGCGATGCGCTCTTTTCCGTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGtgttt < 2:214480/244‑1 (MQ=255) gCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCCGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGTTAATAA‑CGTTGTGACGTTGtgtttg > 2:130685/1‑251 (MQ=255) cGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCCGGATCAGGTTTTGCTCCGCCAGCTCATTGAAG‑TCGCGGCGAATAGTCTGAGGGCTGACGCAGCAATGCTCTACCAGCTCTTCGGAACTGACATAAACCTGCTGTTTAACCAGTTAGATAATACACGT‑GTGACGTtggtatgatttaatttt > 2:425073/1‑236 (MQ=255) cGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAAACCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCAttt > 1:117499/1‑250 (MQ=255) gCGATGCGCTCGTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTTTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATaa < 1:181373/251‑1 (MQ=255) cgttGCGCTCTTTTTCTGCGGTCTGGGTGGCCT‑TGCGATCGTTCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATaaa < 2:105605/248‑1 (MQ=255) cggggcggttctgttcttcGGGCTGGGTGGCCT‑TGCGAACGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCATGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTTTTTATCCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATaaa < 2:53739/238‑1 (MQ=255) cGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATaaa < 1:481487/251‑1 (MQ=255) gATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCTGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTTCCAGCTCTTCGGTACTGCCATAACCCTGCTGTTTAACCAGGTCGATAATTC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAAt > 2:43189/1‑251 (MQ=255) gcgcTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAATcc < 1:544127/250‑1 (MQ=255) tcGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTAttt < 1:320456/249‑1 (MQ=255) tcGGGCTGGGTGGCCT‑GGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCATCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTAtttt < 2:73728/250‑1 (MQ=255) cTGGGTGGCCT‑TTCGATCGTGCCACGGCGTGTTAACCGAACTGGCAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGATTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACAGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGATCGATAATCC‑CGTTGTGACGTTGTGTTTGTTTCTTTTATAAATCCCTGGAATTAttttcgtttt > 1:80560/1‑251 (MQ=255) tGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCCGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGTATTAttttcgttttc > 1:527396/1‑251 (MQ=255) gggTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCCCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTAttttcgtttt < 1:74919/249‑1 (MQ=255) ggCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCCGCGCCGCAACGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAACTGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑AGTTGTGACGTTGTGTTTGTTTCATTTTTAAATCCCTGGAATTATTTTCGTTATCgcgc > 2:230480/1‑250 (MQ=255) cT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGCCATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTg > 1:522930/1‑251 (MQ=255) gCGTGTTAACCGAACTGTAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCCGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTCACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGc > 2:508011/1‑251 (MQ=255) gtgtTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGATGTTTAACCAGTTCGCTAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAAAAAAAGcc > 1:248644/1‑250 (MQ=255) gtTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATc > 1:306297/1‑251 (MQ=255) gtTAACCGAACTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTGCGCGCATTGAGCGAATCAACAAAAGCCAt < 1:156461/250‑1 (MQ=255) aaCTGGAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAAcc < 1:83857/251‑1 (MQ=255) ggAAGGCCGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCAc < 1:43189/250‑1 (MQ=255) gAAGGCAGCGCCGCAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACgg < 1:276439/251‑1 (MQ=255) cgccgcAGCGCCATGATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCg < 1:288187/251‑1 (MQ=255) | AATGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGT‑TGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGA‑TTTGCTCCGCCACTTTGCGGGCGATGCGCTCTTTTTCTTCGGTCTGGGTGGCCT‑TGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCATGATGGC‑CAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGG‑TCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAC‑CGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCG > NC_000913/3560193‑3560685 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |