| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,878,947 | 0 | C | T | 28.3% | 79.8 / 12.9 | 48 | E276K (GAA→AAA) | cas1 | multifunctional nuclease Cas1 |
| Reads supporting (aligned to +/- strand): ref base C (4/29); new base T (13/0); total (19/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.34e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑AAACGGA‑C‑TTCCCGGTCCGGCTCACCA‑GGG‑TTACGACGC‑GCTATCTCAAAAGCTTTCGGTACAACAGTGT‑CAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCTTTCCTGTATGCACAAACCCAATAGCTGGTGCATAACCAGCTGCAAGTATCG > NC_000913/2878700‑2879192 | ccGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTTTcc > 1:83449/1‑251 (MQ=255) tttGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGAGGGGCCGGCGGTTGTATTTTTTCATCGGCAAGAACGTc > 1:227875/1‑251 (MQ=255) tGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGGTGTTTTTTTCCCGCGGCaaaccccagcc > 2:463144/1‑242 (MQ=255) gTTCCCAGATCATTTCACGAATTTTTTCGGATACATCACCTACATACACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCct < 2:289058/250‑1 (MQ=255) tCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGAGGCGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTAAGGTGGGGCCGGCGGTTGGATTTATcccccgcgcagcacgctaccc > 2:541885/1‑231 (MQ=255) ttCACGAATTTTTGCGGATACAGCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCAGCCGCGTAAGCGCGGAGTTCCATTTTCAGTGACCACGACCAACATACTCATGTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTGCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAAt < 2:481575/250‑1 (MQ=255) tCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCAGGCGGTTGGATTTTTCCAACGGCacacaccacctctcatcgccgaatc > 2:86964/1‑226 (MQ=255) tCACGAATTTTTGCGGATACATCACCTACATAAACCCCTGCACGTACCGCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATc < 2:164483/250‑1 (MQ=255) aCATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTTTCCAGCGGCAAGCACGGCCTCTATAAGCGGGATAACTTTGGCTAATGtttttt > 1:63914/1‑249 (MQ=255) cATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTtact < 1:72769/251‑1 (MQ=255) cATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTtact < 1:463144/251‑1 (MQ=255) aTCACCTACATATACCCCTGCCCGTACCTCCAACACCCAGATGGCTCATCTGCCTCGTAAGCGCGGAGGTACATTTTCATTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCAGCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTtacta < 2:381685/251‑1 (MQ=255) cccTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCATCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTg < 1:258477/250‑1 (MQ=255) aCATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACGCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGaa < 2:124573/251‑1 (MQ=255) cccTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATCTcc < 2:83449/251‑1 (MQ=255) ccTGCACGTACCTACAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACGCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGTGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATggtt < 2:157172/230‑4 (MQ=255) gCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTTCATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAATAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTg < 2:296402/250‑1 (MQ=255) cGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACg < 2:312454/251‑1 (MQ=255) ccccccAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTGCAGTGACCACGACCAACATACTCATGTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAGGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑a < 2:124232/247‑1 (MQ=255) aacaacCCGATGGCTAATCTGCCTCGGAAGCGCGGAGGTACATTTTCAGTTACCACGTCCAACATACTCAGTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCGCCAGCGGCAAGCACGTCCTCTATAATCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑AAACgta < 2:20409/251‑3 (MQ=255) ccAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTTTCCAGCGGCAAGCACCGCCTCTATAAAAGGAATCAATTTTGCTTATGTTTTACTACTTCGAAAAAAATTCCCGCCCCCC‑AAACGGA‑C‑tttc > 1:370185/1‑249 (MQ=255) aTGGCTAATTTGCCGCGTAAGCGCGGAGGTACATTTTCAGTTACCTCGACCAACATACTCATTGCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGTTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑AAACTGA‑C‑TTCCCGGt < 1:383390/251‑1 (MQ=255) gggCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCATGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑AAACGGA‑C‑TTCCCGGTc < 1:103156/250‑1 (MQ=255) gCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑AAACGGA‑C‑TTCCCGGTCCg < 1:363098/251‑1 (MQ=255) ccTCGTAAGCGCGGGAGTACATTTTCATTGACCTAGACCAGCATGCTCATTTCAGCTACTCCGATGGCCGGCCTCTCCCAGTGAAACAGGTAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCAGGTGATTGTATTTCTCCAGCGGCAAGCACGTCCCCTATAAGCGGAATCAATTTGGCTAATGTTTTACAACTGCGAAAAATATCCCTGCACGCC‑AAACGGA‑C‑TTCCCGGACCGGCTCACCA‑g < 2:26272/251‑1 (MQ=255) cTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGATGTTTTTTTCCAGCGGGAAACACGTTCTCTATAAAAGGAGTCAATTTGTGTCATGTTTTTCTACTGCGAAAAAAATACCCGCACGCC‑CAACAGA‑C‑CTCCCgggcccggtcacccgg > 1:235591/1‑237 (MQ=255) aGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTTTTTCTCCAGCGGCGAACACCTCCCCTTTAAGCGGGAACAATTTGGGTTAAGTTTTTATACTTCGAAAAATATCCCTGCCCGCC‑AAACGGAAC‑TTCCCGGTC‑GGCTCACCC‑GGG‑GTacg > 1:324307/1‑251 (MQ=255) cgGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCACCGGCAAACACGTCCTCCATAAGCGGAATCAATTTTGTTCATTTTTTTTTAATACGGAAAATATCCCTGCCCCCC‑AAAAGGA‑CATTCCCgttcgcctcaaccagggtacgaacc > 1:127401/1‑227 (MQ=255) ccACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑AAACGGA‑C‑TTCCCGGTCCGGCTCACCA‑GGG‑TTACGACGC‑GCTATCTCAAAAGCTTTCgg < 1:85757/251‑1 (MQ=255) tACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTTTCCCGCGGCCAACACGTCCTCTATAAGCGGAATCAAATTTGCTAATGTTTTACTTCTGCGAAAAAAATTCCTGCACGCC‑AAAAGGA‑C‑TTCCCGGGCCCGACCACCC‑GGG‑GTACGACGC‑GCTCTCTCAAAAGCTTTCTGTacaaacgagtc > 1:39399/1‑244 (MQ=255) tACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTTTTTTTTTCCAGCGGCCAGGACGTCCTCTTTAAGCGGGAACAATTTGGGTAATGTTTTACTTCTGGGCAAAATATCCCTGCACGCC‑AAACGGG‑C‑TTCCCCGTCCGGCCCACCC‑GGG‑GTAACACGC‑GCTATCTCCAAAACTTTCGGTACAAAAATGG‑CCAATTTAatggtt > 1:473952/1‑248 (MQ=255) gtctcttccgatctcAGGAAGCGGAATGGCAACAGGCTGTGCATCTTGAGGTGGGGCCGGCGGTTTTATTTCTCCAGCGGCAAGCACGTCCTCGATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAAAATCCCTGCACGCC‑AAACGGA‑C‑TTCCCGGTCCGGCTCCCCA‑GGG‑GTACGACGC‑GCTATCTCAAAAGCTTTCGGTACAACAGTGT‑CAAATTTAATGATGTCTGCAATATCGTaaa < 1:374582/237‑1 (MQ=255) aTCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGGTGTTTTTGTCCCACGGCAAGCAACTCCTCTCTAAGCCGAATCCATTTTGCTAATGGTTTTCTTATACTCAAAAAATCCCTGCACGCC‑AAACGGA‑C‑TTCCCGGTCCGGCGCACAA‑GGG‑ATAAGCAGC‑CCCATCCCATAAGATTTCGGTACAACAGTGT‑CAAATATTATGTTGTCTGCAATAACGTaa > 2:176190/1‑250 (MQ=255) ctcCCAGTTAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTTTTCCGCCGGAAGCACGTCCTCTATTAGCGGAATCAATTTTGCTCATGTTTTTATTCTGCGGAAAATATCCCCGCACGCCCAAACG‑A‑A‑TTTCCGGGCCGGCTCACCA‑GGGGTTA‑GACGCCGC‑ATCTCAAAAGCTTTCGGTACAACAGTGT‑CCAATTTAATGGTATCTTCCATATCGTaaaa > 1:258787/1‑249 (MQ=255) cAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTTTCCCGCGGCAAGCACGTCCTCTATAAGCGGGAACCATTTTGCTAATTTTTTACTACTGCGGAAAATATTCCTGCACCCC‑AAACCGA‑C‑TTCCCGGGCCGGCTCCCCACGGG‑TT‑CGACGC‑GCTATCTCAAAAACTTTCCGTACAACAGAGT‑CCAATTTTATTATGTCTGccaaattgtaaaacaa > 1:201940/1‑234 (MQ=255) aaCAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑AAACGGA‑C‑TTCCCGGTCCGGCTCACCA‑GGG‑TTACGACGC‑GCTATCTCAAAAGCTTTCGGTACAACAGTGT‑CAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAagag < 2:201940/251‑1 (MQ=255) ggAAGCGGAATGGCAACCGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCATCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑AAACGGA‑C‑TGCCCGGTCCGGCTCACCA‑GTG‑TTACGACGC‑GCTATCTCAAAAGCTTTCGGTACAACAGTTT‑CAAATTTAATGATGTCTTCAATATCGTAAACAAAGGATAGAGGCtt < 2:470516/251‑1 (MQ=255) aGCGGAATGGCAACAGGCTGTGCATCTTCAGGTTGGGCCGGCGGTTGTATTTCGCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑AAACGGA‑C‑TTCCCTGTCCGGCTCACCA‑GGG‑TTACGACGC‑GCTATCTCAAAAGCTTTCGGTACAACAGTGT‑CAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCTTTcc < 2:389925/251‑1 (MQ=255) aTGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTATATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑AAACGGA‑C‑TTCCCGGTCCGGCTAACCA‑GGG‑TTACGACGC‑GCTATCTCAAAAGCTTTCGGTACAACAGTGT‑CAAATTTAATGATGTCTGCAATATCGTAAAc < 1:496587/227‑1 (MQ=255) cAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTTTCCAGCCGCAAGCAAGTCCTCTATAAACGGGATCAATTTTGCTAAAGTTTTACTACTGAGGCAAATATCCCTCCCCGCC‑AAACGGA‑A‑TTTCCGGTCCCGC‑CCCCACGGG‑TTACGACGC‑GCTAACTCCAAAGCCTTTGGTACAAAAAGGTGCAAATTTA‑TGATGTTTGCAATATCGTAAAAAAAAGGAAGAAGCGTTCCTGTATgaaaaaa > 1:261688/1‑244 (MQ=255) gtgCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑AAACGGA‑C‑TTCCCGGTCCGGCTCACCA‑GGG‑TTACGACGC‑GCTATCTCAAAAGCTTTCGGTACAACAGTGT‑CAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGATGCTTTCCTGTATGCACAAACCCaa < 1:433477/249‑1 (MQ=255) gtgCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑AAACGGA‑C‑TTCCCGGTCCGGCTCACCA‑GGG‑TTACGACGC‑GCTATCTCAAAAGCTTTCGGTACAACAGTGT‑CAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCTTTCCTGTATGCACAAACCCAATa < 2:114129/251‑1 (MQ=255) gtagcTTCAGGGGGGGCCGGCGGGTGTATTTCTCCAGCGGCAAGCACGTCCTCGATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAAGATCCCTGCACGCC‑AAACGGA‑C‑TGCCCGGTCCGGCTCACCA‑GGG‑TTACGACGC‑GCTATCTCAAAAGCTGTCGGTACAACAGTGT‑CAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCTTTCCTGTATGCACAAACCCAATAg < 2:520408/246‑1 (MQ=255) aTCTTCAGGTGGGGCCGGCGGTTGTATTTTTCCCGCGGCAAACACGTCCTCTATAAGAGGGATCAATTTGGGTAAAGTTTTTCTAATTCGAAAAATATCCCCTCACGCC‑AAACGGG‑C‑TTCCCCGTCCGGCTCACCC‑GGG‑GTACGACGC‑GCTATCTCAAAAGCTTTCGGTACAACAGTGT‑CAAATATAATAATGTCTGCACTATCGTAAACAAAAGAAAGCGGCTTTCCTGTATGCACCAAACCAATAGCTg > 1:34504/1‑251 (MQ=255) ggTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑AAACGGA‑C‑TTCCCGGTCCGGCTCACCA‑GGG‑TTACGACGC‑GCTATCTCAAAAGCTTTCGGTACAACAGTGT‑CAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCTTTCCTGTATGCACAAACCCAATAGCTGGTGCATa < 1:105600/251‑1 (MQ=255) cggcggTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑AAACGGA‑C‑TTCCCGGTCCGGCTCACCA‑GGG‑TTACGACGC‑GCTATCTCAAAAGCTTTCGGTACAACAGTGT‑CAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCTTTCCTGTATGCACAAACCCAATAGCTGGTGCATAACCAGCTg < 2:63914/251‑1 (MQ=255) ggcggTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGGATCAATTTGGCTCATGTTTTTCTACTGCGAAAAAAATCCCTGCACGCC‑AAACGGA‑C‑TTCCCGGGCCGGCTCACCC‑GGG‑TTACGACGC‑GCTATCTCCAAAGCTTTCGGGCCAACAGGGT‑CAAATTTAATGATTTCTGCACTATCCTAAAACAAGGAAAGAGGCATTCCTGTTACCCCAAACCCAATACCGGGTGCATAACCAGCTGc > 2:247943/1‑251 (MQ=255) tATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑AAACGGA‑C‑TTCCCGGTCCGGCTCACCA‑GGG‑TTACGACGC‑GCTATCTCAAAAGCTTTCGGTACAACAGTGT‑CAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCTTTCCTGTATGCACAAACCCAATAGCTGGTGCATAACCAGCTGCAAGTATcc > 2:272084/1‑250 (MQ=255) | CCGCCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTGTATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAATGTTTTACTACTGCGAAAAATATCCCTGCACGCC‑AAACGGA‑C‑TTCCCGGTCCGGCTCACCA‑GGG‑TTACGACGC‑GCTATCTCAAAAGCTTTCGGTACAACAGTGT‑CAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCTTTCCTGTATGCACAAACCCAATAGCTGGTGCATAACCAGCTGCAAGTATCG > NC_000913/2878700‑2879192 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |