New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3583428 =	NA (NA)	42 (0.810)	32/492	0.6	100%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	= 4542158	0 (0.000)					coding (122/597 nt)	fimE	regulator for fimA

AATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGAT  >  NC_000913/4541909‑4542402                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                     aaTGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTTTGTTGGGATATCGGCATGGGATGCGg                                                                                                                                                                                                                                                     <  1:150091‑M2/251‑2 (MQ=255)   tGTAATTGACTGATAGCCACATCACTCCGTGAGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATAACGGCCTGGGGTGCGggg                                                                                                                                                                                                                                                   <  1:373088‑M2/251‑4 (MQ=255)    gTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCAAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggt                                                                                                                                                                                                                                                   >  1:169957‑M2/1‑247 (MQ=255)                   ccACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttac                                                                                                                                                                                                                                   >  1:297892‑M2/1‑232 (MQ=255)                    cacaTCACTCCGTGTGTGGTTATCTTTGTATCTAGTGGGATAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGATTACTACTATTGTTAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCAGGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTTCTGGCATATCTGCATGGGATGCGtgggatgctgtcaacttacg                                                                                                                                                                                                                                  >  2:357034‑M2/1‑231 (MQ=255)                         cACTTCGTGTTTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgattt                                                                                                                                                                                                                             >  1:103565‑M2/1‑226 (MQ=255)                          aCTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTTTTGTCTTATTCTGTTGGCCTATCGGCATGGGATGCGggggatgctgccaactttctgatttt                                                                                                                                                                                                                            <  1:416754‑M2/251‑27 (MQ=255)                                    tgGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTACTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGGGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCAATGATGCAGGCGGTTTGTTAAGGGGGAACGGGAGCCCGAGATTATTGTCTTATTCTGTTGGCATATCGGGATGGGGTGGGgggggtgctgccaacttactgattttgtgtatggtg                                                                                                                                                                                                                  <  1:80929‑M2/251‑37 (MQ=255)                                                         ggCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCCACGGGAGCCCGAGATTATTGACTTATTCTGTTGGCATATTGGAATGGGATGCGggataagctgcccaattaatgatttagtgtatgattgggttttttaggtgcccccgt                                                                                                                                                                                             <  2:421963‑M2/251‑58 (MQ=255)                                                                   gACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt                                                                                                                                                                                    >  2:110903‑M2/1‑184 (MQ=255)                                                                    aCCGATTGAGGTTTCCTATAGGTATTCAATCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGGCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgcgccagtggcttctgttt                                                                                                                                                                                  >  2:179597‑M2/1‑183 (MQ=255)                                                                                      taGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTTTGTTGGCAAATCGGCATTGGATGCGggagatgctgccaacttactgatttagtgtatggtggggtttttgaggtgctccagtggcttctgtttatatccgctgtccctccc                                                                                                                                                                <  1:156735‑M2/251‑87 (MQ=255)                                                                                             tcattcaAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGAAAAGGGAGCCAGAGATTTTTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggggatgctgccaacttactgattttgtgtatggtggggtttttgaggtgctcccgtggcttttgtttctaataacttgcctctcttgttcac                                                                                                                                                         <  2:473310‑M2/251‑94 (MQ=255)                                                                                                                  aGGAGTACTACTATTGTGAGTATACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaa                                                                                                                                    >  2:400585‑M2/1‑137 (MQ=255)                                                                                                                  aGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaa                                                                                                                                    >  1:353508‑M2/1‑137 (MQ=255)                                                                                                                                       aaaCGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatgttgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcttaacggcaaaagcaccgccggac                                                                                                                >  2:499016‑M2/1‑116 (MQ=255)                                                                                                                                                tATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgct                                                                                                       <  1:295993‑M2/250‑144 (MQ=255)                                                                                                                                                     tACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatc                                                                                                    >  1:151477‑M2/1‑102 (MQ=255)                                                                                                                                                      aCCGGTAAATAAGTTCGGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCTAGAGATTATTGTCTTATTCTGTTGGCATATCGGCAGGGGATGCTggtgatgctgccaacttactgatttagtgtatgatggggtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctct                                                                                                 >  2:270081‑M2/1‑101 (MQ=255)                                                                                                                                                      aCCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGTCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctct                                                                                                 >  1:390940‑M2/1‑101 (MQ=255)                                                                                                                                                      aCCGGTAAAGAAGTTCAGGCCAGGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcgtctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctct                                                                                                 >  2:193157‑M2/1‑101 (MQ=255)                                                                                                                                                              agaagTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacg                                                                                                                                                 >  1:359382‑M2/1‑93 (MQ=255)                                                                                                                                                                     cAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaa                                                                                 >  1:2019‑M2/1‑86 (MQ=255)                                                                                                                                                                                     cGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgc                                                                   <  1:365503‑M2/249‑180 (MQ=255)                                                                                                                                                                                     cGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggaaactgc                                                                   <  1:75752‑M2/249‑180 (MQ=255)                                                                                                                                                                                       ctttgTTACGGGGCAACGGTAGCCAGGGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtctgatggtggttttgaggtgctccagtggcttctgtttctatcagctgtccctccagttcagctactgaaggggtggtgcgtacctgcaacagcaccgccggacatcagagctatctctgttctccctgccgcaaaaactggcaactactgtt                                                               <  2:2585‑M2/250‑184 (MQ=255)                                                                                                                                                                                          tGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttca                                                             >  1:215436‑M2/1‑65 (MQ=255)                                                                                                                                                                                                ggggCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacctggccactgcagttcccttacac                                                      <  2:99328‑M2/251‑193 (MQ=255)                                                                                                                                                                                                              cAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccg                                        >  1:16016‑M2/1‑45 (MQ=255)                                                                                                                                                                                                                 agaTTATTGTCTTATTCTGTCGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtaccgcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggta                                     >  1:245215‑M2/1‑42 (MQ=255)                                                                                                                                                                                                                  gaTTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtac                                    >  1:523967‑M2/1‑41 (MQ=255)                                                                                                                                                                                                                  gaTTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctatgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtac                                    >  1:161413‑M2/1‑41 (MQ=255)                                                                                                                                                                                                                  gaTTATTGTCTTATTCTGTGGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagaggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcccttacaccgcttctcaccccggtac                                    <  2:396707‑M2/251‑211 (MQ=255)                                                                                                                                                                                                                    ttatgttctgattCGGTTGGCATATCGGCATGGGAGGTGggtgatgcggccaactttctgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgggggggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacg                                   >  2:256901‑M2/7‑39 (MQ=255)                                                                                                                                                                                                                        tGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcacc                               <  1:7645‑M2/250‑216 (MQ=255)                                                                                                                                                                                                                        tGTCTTATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgaatgatggtgtttttgaggtgctcccgtggcttctgtttatatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcacccccgtccatcagcgctatctcttctctcactgccgtaaaaaatggcacctgcagttcacttaccccgcttctcaacccggtccgccccc                              <  2:434152‑M2/251‑217 (MQ=255)                                                                                                                                                                                                                             tATTCTGTTGGCATATCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaa                          <  1:295400‑M2/250‑221 (MQ=255)                                                                                                                                                                                                                                tCTGTTGGCATCTCGGCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgccgttcacttacaccgcttctcaacccggtacgcaccagaaaatc                       <  2:493053‑M2/250‑224 (MQ=255)                                                                                                                                                                                                                                              ggCATGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggccatg        <  1:198420‑M2/251‑239 (MQ=255)                                                                                                                                                                                                                                                 gtgGGATGCGagtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctaatgacggggtggtgcgtaacggcaaaagcaccgccggacatcagagctatctctgctctcccctccgtaaaacctggcaactgcagttcacttacaccgcttctccaacaggtacgcaccagaaaatcattgatatggccatgaat     <  2:234842‑M2/250‑242 (MQ=255)                                                                                                                                                                                                                                                  tGGGATGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggccatgaatg    <  1:460195‑M2/251‑243 (MQ=255)                                                                                                                                                                                                                                                    ggATGCGggtgatgctgccaacttactgatttagtgtatgagggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggccatgaatggc  >  1:274704‑M2/1‑7 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                     AATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGAT  >  NC_000913/4541909‑4542402

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.