New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3583428 =	NA (NA)	4 (0.080)	3/492	5.6	5.8%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	= 3729457	65 (1.250)					noncoding (89/160 nt) coding (1309/1323 nt)	xylZ xylA	small RNA XylZ xylose isomerase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTAATGAAGTTAGTATTCTTTTTAAGAATCAACCTGATTATCTTACTTTTTTAAGAGCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGT  >  NC_000913/3583186‑3583673                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                        gTAATGAAGTTAGTATTCTTTTTAAGAATCAACCTGATTATCTTACTTTTTTAAGAGCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGAtgct                                                                                                                                                                                                                                                 <  1:70449/251‑1 (MQ=255)    aTGAAGTTAGTATTCTTTTTAAGAATCAACCTGATTATCTTACTTTTTTAAGAGCAATGGATTGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGcc                                                                                                                                                                                                                                              <  1:258830/251‑1 (MQ=255)         gTTAGTATTCTTTTTAAGAATCAACCTGATTATCTTACTTTTTTAAGAGCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACtt                                                                                                                                                                                                                                         <  2:322667/251‑1 (MQ=255)                ttCTTTTTAAGAATCAACCTGATTAGCTTACTTTTTTAAGAGCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCACGATTCCAGAACCTTCAGTTAAAACCCTTTTTGCCGTAAATGACTTTTATAGAAATAATGATGATTTCATAAACCCTGCTCTACAAGAACGGATCGTGATCGGGGCTTATAGCATTTCAATATTTACTTATGACATTAAAGGGGGTGTGGCCAACTTACTT‑Att                                                                                                                                                                                                                                 >  2:326578/1‑251 (MQ=255)                      ttAAGAATCAACCTGATTATCTTACTTTTTTAAGAGCAATGGATGGATTCGAAGTTAATGGTTTACGATTCTTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAATTGAATTTTATAGAAATAATGATGCTTTCTTAAACCTTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCATTATTAATTTATGACTTTAAAGGTGTTGCTGCCAATTTACTC‑ATTTAgtgt                                                                                                                                                                                                                           >  2:65084/1‑251 (MQ=255)                         aGAATAAACATGATTATCTTACTTTTTTACGAGCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGAGATCGGGGATTATAGAATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTCCTG‑ATTTAGTGTatg                                                                                                                                                                                                                        >  2:239113/1‑251 (MQ=255)                            aTCAACCTGATTATCTTACTTTTTTAAGAGCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTAATG‑ATTTAGTGTatgatg                                                                                                                                                                                                                     >  2:436745/1‑251 (MQ=255)                              cAACCTGAATATCTTACTTTGTTAAGAGCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCTATTCCAGAACCGTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATTATGATTTCATAAACCCTGATCTACATTATCGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATTCTGCCAACTTACTG‑ATTCAGTGTATGATggg                                                                                                                                                                                                                   <  2:335713/251‑2 (MQ=255)                               aaCCTGATTATCTTACTTTTTTAAGAGCAATGGATGGATCCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGCCATTAAAGGTGATGCTGCCAACTTACTG‑ATTTATTGTATGATGgtg                                                                                                                                                                                                                  >  1:453541/1‑251 (MQ=255)                                              cTTTTTTAAGAGCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTcc                                                                                                                                                                                                   >  2:66698/1‑251 (MQ=255)                                                 ttttAAGAGCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGt                                                                                                                                                                                                >  2:28739/1‑251 (MQ=255)                                                      agagCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAATCCTTGTTGCCGTAAATGAATTGTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑Ctt                                                                                                                                                                                          <  2:428972/251‑1 (MQ=255)                                                           aaTGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTTCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACCTTAAAGGTGCTGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGtt                                                                                                                                                                                     >  2:3966/1‑251 (MQ=255)                                                              ggatggatTCGTAGTTAATGGATTACGATTATTTAGCCTCTCGCTTCCAGAACCTTCGGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTCTGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTCGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCt                                                                                                                                                                                  >  2:353403/1‑251 (MQ=255)                                                                                       cGATTCTTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGCTTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCt                                                                                                                                                          >  2:127704/1‑250 (MQ=255)                                                                                        gATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGAGTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTAc                                                                                                                                                        <  1:65084/251‑1 (MQ=255)                                                                                            ctttAGCCTCTCGATTCCAGAACCTTCAGTTAAACACCTTTTTGCCGTAACTGAATTTTATAGAAATAATGATGATTTCATATACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTgtc                                                                                                                                                    >  2:212427/2‑249 (MQ=255)                                                                                                                 aCCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCAAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCaa                                                                                                                                >  2:187970/1‑250 (MQ=255)                                                                                                                          tAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATGTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCAccgc                                                                                                                       <  1:539865/250‑1 (MQ=255)                                                                                                                           aaaaaCCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCAccgccg                                                                                                                     >  1:259697/1‑251 (MQ=255)                                                                                                                                ccTTTGTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAGCCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGTTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCGCCTGTTCAGCTACTGACGGGGTGGTGCTTAACTGCAAAAGCACCGCCGGACAt                                                                                                                <  1:468469/251‑1 (MQ=255)                                                                                                                                     ttGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAgc                                                                                                            <  1:312627/250‑1 (MQ=255)                                                                                                                                         cGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTAt                                                                                                       >  1:418763/1‑251 (MQ=255)                                                                                                                                                gAATTTTATAGTAATAATGATGATTTCATAACCCCAGATCTACAAGATAGGTTAGTGATCGGTGATTATATCATTTCAATATTTACTTATGCCAGTAAAGGTGTTGCTGTCAACTTACTG‑TTTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGGTTCTATCAGCTGTCCCTCCTGTTCACCTACTGTCGGGATGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCCATCTCTGc                                                                                                 <  2:122316/250‑1 (MQ=18)                                                                                                                                                gAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGct                                                                                                >  1:192984/1‑251 (MQ=255)                                                                                                                                                      tataGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCAc                                                                                           <  1:233249/250‑1 (MQ=255)                                                                                                                                                          gAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGGGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAACAGCACCGCCGGACATCCGCGCTATCGATGCTCTCACTGCCg                                                                                      >  2:297632/1‑251 (MQ=255)                                                                                                                                                               aatGATGATTTCATAAACCCTGATCTATAAGAACGGTTAGTGATCGGGGATTATAGCATTTAAATATTTATTTATGACATTAAAGGTGATGCTGCCAACTT‑CTGGATTTAGTGTAGGATGGTTTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGTGGCGTACCGGCAAAAGCACCGCCGGACATCAGCGCTATCCCTGCTCTCACTGCCGTaaaa                                                                                 <  2:439100/251‑1 (MQ=18)                                                                                                                                                               aatGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTTCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTaaaa                                                                                 <  1:240859/251‑1 (MQ=255)                                                                                                                                                                atgatgTTTTCCTAAACTCTGATCTCCAAGAACGGTTAGTGCTCGGGCATTATAGCATTTCAATATTTACTTATGACTTTAAAGGTGGTGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGCGGCTCCAGTGG‑CTTCTGTTTCTATCAGCAGTACCTCCTGTTCAGCTACTGTCGTGGTGGCGCGTTACGCGAAAAGACCCGCCGGACATCAGCGCTATCTCTgatccacctcccgtaaaa                                                                                 >  2:231867/1‑233 (MQ=17)                                                                                                                                                                           aTAAACCCTGATCTACAAGAACTGTTAGTGCTCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCCGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGCCATCAGCGCTATCTCTGCTCTCACTGCCATAAAACATGGCAACTGc                                                                     >  2:252564/1‑251 (MQ=255)                                                                                                                                                                              aaCCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGt                                                                  >  1:92145/1‑251 (MQ=255)                                                                                                                                                                                 ccTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGCAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCa                                                               <  1:74621/251‑1 (MQ=255)                                                                                                                                                                                  cTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTccc                                                              >  2:277893/1‑249 (MQ=255)                                                                                                                                                                                    gATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGTGGTGGTGCGTAACGGCAAAAGCACCGCCGGCCATCAGCGCTCTCTCTGCTCTCACTGCCGTAAAACATGGCAAATGCCGTGCACtt                                                            >  2:86274/1‑251 (MQ=255)                                                                                                                                                                                      tCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTac                                                          >  1:491669/1‑251 (MQ=255)                                                                                                                                                                                          cAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCg                                                      <  1:372930/251‑1 (MQ=255)                                                                                                                                                                                               acgtatatgtgtgggggATTATAGCCATTCAATTTTTTCTTATGACTTTTAAGGGGATGCGGCCAATTTTGTT‑ATTTGGTGTATGATGGTGTTTTGGGTGTGCTCC‑GTGGGCTTCTTTTTCTATCGTCTTTCCCACCTGTTAAGCTTCTGACGGGTTGGTGCTTAACGGAAAAAGCACCGCCGGACATCAGCTCTATCCCTGCTCTCACTGCCGTAAAACATGGCAACTGCATTTCACTTACTCCGCTtct                                                 <  2:449770/238‑1 (MQ=2)                                                                                                                                                                                               aCGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCTTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTc                                                                <  1:313066/236‑1 (MQ=255)                                                                                                                                                                                               aCGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGCCATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTc                                                                >  2:313066/1‑236 (MQ=255)                                                                                                                                                                                                 ggTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCa                                               <  1:28739/251‑1 (MQ=255)                                                                                                                                                                                                     aGTGATCTGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTTTATGATGGTGTTTTTGAGTTGCTCCAGTGG‑CTTCTGGTTCTATCAGCTGTCCCTCCTGTTCAGCGACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTAGCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAAccg                                           <  2:50787/251‑2 (MQ=255)                                                                                                                                                                                                                attattGCATTTCAATATTAGCTTATGACACTAAAGGTGAAGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑ATTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGGGTAACGGACAAAGCACCGCCAGACATCAGCGCTATCTATGATCTCACTGCCGTAAAACATGGCAACTGCAGTACACTTACACCGCTTCTCAAACCGGTACGCaac                                 >  2:172488/1‑248 (MQ=11)                                                                                                                                                                                                                   ataGCATTTCAATATTTCCTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGA‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAAAGGCAAAAGCCCCGCCGGACATCAGCGCCATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTACACCCGGTACgacacaga                              >  2:522758/1‑243 (MQ=14)                                                                                                                                                                                                                   ataGCATTTCAATATTTACTTATGACATTAAAGGCGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGAGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTACCGTAACACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGa                              >  1:464393/1‑250 (MQ=255)                                                                                                                                                                                                                        aTTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTTTTCAGCTACGGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCa                        <  1:477036/251‑1 (MQ=255)                                                                                                                                                                                                                              atatTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGata                  <  2:192984/251‑1 (MQ=38)                                                                                                                                                                                                                              atatTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGat                   >  1:275327/1‑250 (MQ=39)                                                                                                                                                                                                                                         tGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAAt       >  1:157395/1‑251 (MQ=33)                                                                                                                                                                                                                                          gACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGCGTATGATGGCGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGATCACTTACACCGCTTCTCAACCCGGGACGCACCAGAAAATCCTTGATATGGCCATGAATg      >  2:309064/1‑251 (MQ=255)                                                                                                                                                                                                                                              ttAAAGGTGATGCTGCCAAATTACTG‑ATTTAGTGTATGCTGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGt  >  2:387905/1‑251 (MQ=14)                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                        GTAATGAAGTTAGTATTCTTTTTAAGAATCAACCTGATTATCTTACTTTTTTAAGAGCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAGGTGATGCTGCCAACTTACTG‑ATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGG‑CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGT  >  NC_000913/3583186‑3583673

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.