Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,468,298 IS3 (+) +3 bp coding (85‑87/921 nt) yfdH → bactoprenol glucosyl transferase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2170171 =NA (NA)41 (0.790) 38/492 0.4 95.3% noncoding (1/1258 nt) IS3 repeat region
?NC_000913 = 2468300 2 (0.040)coding (87/921 nt) yfdH bactoprenol glucosyl transferase
* ? NC_000913 = 2171428NA (NA)42 (0.810) 37/490 0.4 95.4% noncoding (1258/1258 nt) IS3 repeat region
?NC_000913 2468298 = 2 (0.040)coding (85/921 nt) yfdH bactoprenol glucosyl transferase

TTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACA  >  NC_000913/2171197‑2171665
                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                               
ttGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATc                                                                                                                                                                                                                              >  1:184555/1‑250 (MQ=38)
    tgctACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTTGGCCTGGGTCCCTATTACGGGGGTAGGATCAGTCA‑TCCCTTCGTGGGTCTtttt                                                                                                                                                                                                                         >  2:340954/1‑251 (MQ=255)
        aCGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACt                                                                                                                                                                                                                     <  1:87095/251‑1 (MQ=255)
        aCGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACt                                                                                                                                                                                                                     <  1:338488/251‑1 (MQ=255)
        aCGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACt                                                                                                                                                                                                                     <  1:340954/251‑1 (MQ=255)
            tAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGTAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTgccg                                                                                                                                                                                                                 >  1:309703/1‑251 (MQ=255)
             aaTGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGGGTGGCGGCATCAGACCGGAACAATATTGAACA‑AAGAACCTCCCTTAAGCCAGGGTCCCTATTCAGTGGGTTGGATCAGTCA‑TACCTTCGCGGTTCACTTTGACTgc                                                                                                                                                                                                                   >  2:207554/1‑248 (MQ=11)
                 ccTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCCTATTACGGTGGTAGGATCAGTCG‑TCCCTTCGTGGCTCATTTTGACTGCCGCCTgc                                                                                                                                                                                                            >  1:241567/1‑251 (MQ=255)
                         ggaaGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑GCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTc                                                                                                                                                                                                     <  2:257566/248‑1 (MQ=255)
                                   ttCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGTTTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑GGCCTTCGTGGATCATTTTGACTGCCGCCGGCGCTATTCTGtttttt                                                                                                                                                                                             <  1:427965/248‑1 (MQ=255)
                                   ttCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGTCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑gg                                                                                                                                                                                          <  2:253108/250‑1 (MQ=255)
                                   ttCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGAAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑gg                                                                                                                                                                                          <  1:265718/250‑1 (MQ=255)
                                      aTTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGACTGGAACAAT‑TTTGAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGGTCAGGCC‑TCCCTTCGTGGATCATTTTTACTGCCGCCTGCGCTATTCTGTTTTTT‑Tgcgcg                                                                                                                                                                                      >  2:70863/1‑251 (MQ=17)
                                          gCTGAAAGTGGAATGTATCAATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGTTGTGGCGGCCTCAGTCCGGAACCAA‑TTGAAAAAAAGAACCTAGCTTAGGCCTGTGTTCATATTAAGTGGGTAGGATCAGTAC‑TCCCTTGGTGGGTCCTTTTTACTGCCGCCTGCGGTTTTTTTTTTTTT‑Tgcgcgcagg                                                                                                                                                                                  >  2:371880/1‑248 (MQ=11)
                                          ccTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTgg                                                                                                                                                                                  <  2:77501/250‑1 (MQ=255)
                                              aaaGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGCATGTGATTTCAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCGCAGGCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GTCGCCCTTGCGAg                                                                                                                                                                              <  2:374266/251‑1 (MQ=17)
                                              aaaGTGGAATGTATCAATGGAGAACACTTTATCAGCAGGGACATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGAGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAAACTCGCTTAGGCCTGATTCCCTATTACGGGGGAATGAACCGGCC‑TCCCTTCGTGGATAATTTTTACTTCCGGCTGCGCTCTTTTGTTTTTTTGGCG‑GCTGGCggg                                                                                                                                                                              >  2:322742/1‑249 (MQ=11)
                                                    gAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTTGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCCTATTTCGTGGGGAGGATCAATCA‑TCCCTTCGTGGGTCATTTTGTCTGCCGCCTGCGCTATTCTGTTTTTT‑TGCGCGCTGGCGCGCTGaa                                                                                                                                                                         >  2:161960/1‑250 (MQ=17)
                                                           cccATGTAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGctct                                                                                                                                                                 <  2:65902/250‑1 (MQ=255)
                                                                                      aaaTAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACCAAAACCTCGCTTAAGCCTGTGTCCATATTACGTGGGTAGGAACAGTCA‑TCCCTTCGGGGCTCATTTTGAATGCCACCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGGGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGtt                                                                                                                                      >  2:530936/1‑251 (MQ=21)
                                                                                      aaaTAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGGGTCCATATTACGTGGGTAGGATCAGGCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAAACCGACTTCCTGGGTCTCGGtt                                                                                                                                      >  1:378238/1‑251 (MQ=255)
                                                                                                  cAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGGGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTAcc                                                                                                                           >  1:6774/1‑250 (MQ=255)
                                                                                                    aCGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGa                                                                                                                        <  1:436561/251‑1 (MQ=255)
                                                                                                       gtgtTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACat                                                                                                                     >  1:269751/1‑251 (MQ=255)
                                                                                                              aTTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTc                                                                                                              <  1:517489/251‑1 (MQ=255)
                                                                                                                  tatCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTTGGTCTCGGTTTCACTATTACCAGACATTATTTTcgccc                                                                                                          >  1:455675/1‑250 (MQ=255)
                                                                                                                          gggatagaaagcgggggcggcggcACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGGCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATGTTGACGGCCGCCTGCGCTAGTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATGACCAGACATTATTTTCGCCGCACCGCCa                                                                                                  <  2:241567/236‑1 (MQ=37)
                                                                                                                               tACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGCACCAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCCTATTACGTGTGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGCAATCGCTCTTTCAACCCGACTTCCTGGGTCTCGGTTTCCCTATTACCCGCCATTCTTTTCGCCGCAACGCCATgca                                                                                              >  1:433366/1‑248 (MQ=25)
                                                                                                                                      ggggggggcggcACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGACCCTCGCTTAGGCCTGTGCCCATATTACGGGGGTAGGATCAGTCA‑TCCCTTCGTGGTTCATTTTGACTTCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCCCTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTa                                                                                      <  1:229737/245‑1 (MQ=38)
                                                                                                                                        tGGCGGCGGCACAGTTTGTGTGGCGGCCTCAATCCGGAACAAT‑TTGAAAACAAGAACCTCGCGTAGGCCTTTTTCCATATTACGTGGGAAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑TGCGCGCTTGCGAACTGAAATCGCCCTTTTACCCCGACTTCCTGGGGCTCAGTTTCACGATTACCAAACATTTATTTCACCGCACCGCCATTAAAgcccacacc                                                                                    >  2:102170/1‑244 (MQ=21)
                                                                                                                                           gggaggcccaGTGGGTGTGGCGGCTCCAGGCCGAAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTTTGTCCAGATTACGTGGGTAGTATC‑GTCCCTCCCTCGGTGGATCATTTTGACTTCCGCCGTCGCTATTCTGTTTTTT‑GGCTCGCGGGCGATCTGAAACCCCACTTTAACCCCGACTCCCTTGGTCTCGGTTTCACTATTCCCACACATTATTTTCCCCTCACCGCCATGAAAGCGCGTAACCAc                                                                                 <  2:48932/243‑1 (MQ=255)
                                                                                                                                                gcACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGCAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAAGCGCTCTTTAAACCCGCCTTCCTGGGTCTCGGTTTCACTATTACCTGCCATTATTTTCGCCGCACCGCCATGCAAGCGCGTAAACACGCCtt                                                                            >  2:195207/1‑251 (MQ=38)
                                                                                                                                                  acaGTTGGTGTGGCGGCCTCAGCCCGGAAAAAT‑TTAAAAACAAGAACCTCTCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGCGGAGCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCtttt                                                                          <  1:144888/251‑1 (MQ=255)
                                                                                                                                                   caGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGACCCTCTCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCttttt                                                                         <  1:138564/251‑1 (MQ=255)
                                                                                                                                                   aatttGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGTGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCTCCTGCGCTATTCTGTTTTTT‑GGCGCGCGGGCGAGCTGAAACCGCTCTTTAAACCCGATTTCCTGGGTCTCGTTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCttttt                                                                         <  1:488493/248‑1 (MQ=38)
                                                                                                                                                       tggggtggagtccccAGTCCGAAAAATT‑TTGAAAAAAAAACCCTCGCTGAGGCGTTTGTCCATTTTATGTGTGTATGATCAGTCA‑TCCCTGTGTGGATCATTGTGACTGCCGCCGGTGTTATTTTTTTTTTT‑GGCGCGCGGGCTAGCTGAAATCGTCCTTTAACCCCGACTTCCTGGGTCTCGGTTTCCCAATTACCATATATTATTTTCACCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGtt                                                                      <  2:343499/236‑1 (MQ=255)
                                                                                                                                                              gcggcCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGCGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACCTTCTTTTCGCCGCACCGCCATGAAATCGCGTAACCACGCCTTTTTGTTCGAGaacg                                                              >  2:252675/1‑249 (MQ=255)
                                                                                                                                                               cggcCTCAGTACGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACAACGCCTTTTTGTTCGAGAAAgc                                                             >  1:330177/1‑251 (MQ=255)
                                                                                                                                                                          cGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCTTATTACGTGTGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGGTTTTT‑GGCGCGCTGGCGAGCTTAAATCGCCCTTTAACCCCGACTTCCTGGGTCTCGTTTTCACTATTCCCGGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCa                                                  <  1:38403/251‑1 (MQ=255)
                                                                                                                                                                                aaT‑TTGAAAACAAGAACCGCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTGT‑GGCGCGCGGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGTTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGAtt                                            <  1:26640/251‑1 (MQ=255)
                                                                                                                                                                                     tGAAAACAAGAACCCCGCTTAGGCCTGTGTCTAATTTTCGTGGGTAGGATCATTCA‑TCCCTTCGGGGTTCATTTTGACTGCCGCCTGCGCTATTCTTTTTTTG‑GGCGCGCTGGCTAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTc                                         <  2:164562/250‑1 (MQ=255)
                                                                                                                                                                                       aaaaCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGACA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTTCCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGACTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCt                                      >  1:499964/1‑251 (MQ=255)
                                                                                                                                                                                              gAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAgg                               >  1:462340/1‑251 (MQ=255)
                                                                                                                                                                                                                 gtCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGcc              >  2:473560/1‑249 (MQ=255)
                                                                                                                                                                                                                     atatTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATcc        >  1:359433/1‑251 (MQ=255)
                                                                                                                                                                                                                      aatTACGGGGGTAGTATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCCCCTGCGCTATTCTTTTTTTT‑GGCGCGTGGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCt       <  1:161960/250‑1 (MQ=255)
                                                                                                                                                                                                                             tGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACa  >  1:475324/1‑249 (MQ=255)
                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                               
TTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAAT‑TTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAGTCA‑TCCCTTCGTGGATCATTTTGACTGCCGCCTGCGCTATTCTGTTTTTT‑GGCGCGCTGGCGAGCTGAAATCGCTCTTTAAACCCGACTTCCTGGGTCTCGGTTTCACTATTACCAGACATTATTTTCGCCGCACCGCCATGAAAGCGCGTAACCACGCCTTTTTGTTCGAGAAAGCGCAAATCGGCACGGATTGTCGCTTCCGAGGCAGCAAATACTCCCGCCAGATCCTGAACA  >  NC_000913/2171197‑2171665

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.