| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,302,207 | +A | coding (1026/1632 nt) | oppA → | oligopeptide ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,302,207 | 1 | . | A | 84.9% | 128.5 / 21.2 | 53 | coding (1026/1632 nt) | oppA | oligopeptide ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base . (4/4); new base A (21/24); total (25/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 | |||||||||||
AGTGGTGAAATCGACATGACGAATAACAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGT‑TACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCGATCTGCATAAAAAGCTGGCGATTGCTGCCTCTTCATTGTGGAAGAAAAACATTGGTGTAAACGTCAAACTGGTTAAC > NC_000913/1301971‑1302441 | aGTGGTGAAATCGACATGACGTATAACAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCCCCGt > 2:289306/1‑250 (MQ=255) ggtgAAATCGACATGACGTATAACAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATAc < 1:133131/251‑1 (MQ=255) aCAGCATGCCGATCGAATTGTTCCAGAAACTAAAAAAAGAGACCCCGGACGAAGTTCACTTTGATCCATCCCTGTGCACTTACTATTACGAAATCAACACCCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAg < 1:357028/251‑1 (MQ=255) cAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCACGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGc > 1:470750/1‑251 (MQ=255) aGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGACAGCGCAGGGCAACATGCCCGCCTA‑GGTATAACCTCCACCGTATACTGATGGCGCAAACTTGACTCAGcc > 2:8151/1‑251 (MQ=255) gATCGGATTGTTCCCGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTACCAACCA‑GAAAACGCCATTAAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAACTTGCTTCAGACAGAATGGt > 2:476264/1‑251 (MQ=255) aTCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAACTTGACTCAGCCAGAATGGtt > 2:389376/1‑251 (MQ=255) tCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATAACTGTGCACTTACTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGGGCGTACCGCACTGAAACTAGGCATGGACCGCGATATCATTGTTAATAAAGTGAAAACGCAGGGCAACATGCCCGCCTATGGT‑TACACTCCACCGTAAACTGATGGAGAAAAATTGACTCAGCCAAAATGGttt > 2:5777/1‑251 (MQ=255) ccataaGCTGAAAAAAGAGACCCCGGACGAATTTCACTTTGTTCCATACCTGTGCACTTACTATTACGAAATTAACATCCA‑GAAACCGCCATTCAACGATGTGCTTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCTTTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATAGTCTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGcc < 1:352316/247‑1 (MQ=255) aaGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGT‑TACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAgg > 2:88103/1‑250 (MQ=255) aaaGAGAGCCCGGACGAAGTTCACGTTGATCCATACCTGTGAACTTACTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGCAACTAGGTATGGACCGCGATATCATTGTTCATAAAGGGAAAGAGCAGGGCAACATGCCCGCCTAGGAA‑TACACTCCACCGAATACTGATGGAGCAAAATTGGCTCAGCAAGAATGGTGTGGCTGAAGCCAGGaaaaaagac > 1:527186/1‑246 (MQ=255) gagaTCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCA‑GAACCCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACAGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATACCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAACATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACg > 2:211810/1‑250 (MQ=255) agaTCCCGGACGAAGTTCACGTTGATCCATGCCTGTGCACTTACTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGT‑TACACTCCACCGTATACTGATGTCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACga > 1:196246/1‑250 (MQ=255) gaTCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACga > 1:421123/1‑249 (MQ=255) gAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGTGCCAGGACAAACGTAACGAAGAAGCGaaaa > 2:473169/1‑250 (MQ=255) gAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGaaaa > 1:272091/1‑250 (MQ=255) gTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGACAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCAACCGTATACTGCTGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTgctggc > 1:16564/1‑251 (MQ=255) tGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTgctggc‑tg > 1:269343/1‑251 (MQ=255) gacccaccccggtacACTTACTATTACGAAATAAAAACCCA‑GAACCCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGa < 2:6929/237‑1 (MQ=255) gtaCTTCCTATTACAAAATTAACACCCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATAcc < 1:303165/249‑1 (MQ=255) caactacgtATTACAAAATTAA‑AACCAAGAAACCGCCATTCAACGATGTTCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAAGAAAGTGAAAGCGCAGGGCAACAGGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATAcc < 1:474042/243‑1 (MQ=255) aCTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGa < 1:389376/250‑1 (MQ=255) tagtACGAAATTAACAACCA‑GAACCCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACa < 2:132341/247‑1 (MQ=255) tACGAAATAAAAAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAAc < 1:518981/250‑1 (MQ=255) aaaaTAAACAACTA‑AAACCCGCCATTCGACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTTATAAAGGGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGtt < 2:374418/250‑1 (MQ=255) aaacaacAA‑AAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGT‑TACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGAcc < 1:88103/249‑1 (MQ=255) aacCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCa > 2:312875/1‑250 (MQ=255) cA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGAAGACAAACCGTTGACCATCAACCt > 2:165306/1‑251 (MQ=255) a‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGTCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTAAACCGCAGACAAACCGTTGACCATCAACCtg > 1:111161/1‑251 (MQ=255) aaaacccGCCATTCACCGATGTGCGTGGGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCtg < 2:11344/246‑1 (MQ=255) gAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCATGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCtgt > 1:411248/1‑251 (MQ=255) ccATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGtata > 1:499758/1‑250 (MQ=255) cAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACAcc < 1:293032/250‑1 (MQ=255) cAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACAcc < 1:223960/250‑1 (MQ=255) aCGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAGGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTCTAACACCTcc > 2:394143/1‑251 (MQ=255) cGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCg > 1:131503/1‑251 (MQ=255) cgtgtgcgtAACGCACTGAAACTTGGTATGGACCGCGATATAATTGTTAATTAAGTGAACGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATg > 2:496812/1‑134 (MQ=255) cgtgtgcggACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATg < 1:496812/134‑1 (MQ=255) gtgcgtACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCGATCTGCATa > 1:399386/1‑250 (MQ=255) aaccTAGGTATGGACCTGGATATCATTGTTAATAAAGTGAAAGCGCCGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAACCCGTTGACCATCATCCTGTTGTATAACACCTCCGATCTGCATAAAAAGCTGGCGATtgc < 2:96882/248‑1 (MQ=255) ggtgatgtaccgcaagatctttGTTATTAAAGAGAAAGCGCAGGTCAATATCCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACGCAGCCAGAATTGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATCTCGCAGACAAACCGTTGACCATCATCTTGTTGTATAACACCTACGATCTGCATAAAAAGCTGGCGATtgct < 2:387091/227‑1 (MQ=255) aGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCGATCTGCATAAAAAGCTGGCGATTGCTGCct < 1:311480/251‑1 (MQ=255) aTGGACAGCGATATCATTGTTAATAAAGTTAAAGCGCAGGGCAACAGGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACGCAGCCAGAATGTTTTGGCGGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCGATCTGCATAAAAATCTGGCTATTGCTGCCTCTTc < 2:388686/251‑1 (MQ=255) cgcgcatataattttaaataaAGTGCAAGCTCAGGGCTTCTTCCCCGCCTATGGT‑TACACTCCTCCGTATACTGATGTCGCAAAATTGACTCAGCCAGAATGTTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGGAATAACTGCTGGC‑TGAAGCTGGTTATACCGCAGACAAACCGTTGACCAACAACCTGTTGTATAACACTTCCGAATTGCATAAAAAGCTGGCGATTGCTGCCTCTTCATtgt < 2:196246/235‑1 (MQ=255) aTTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCGATCTGCATAAAAAGCTGGCGATTGCTGCCTCTTCATTGTGGAAGaaaaa < 1:447454/251‑1 (MQ=255) ataaAGTGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCGATCTGCATAAAAAGCTGGCGATTGCTGCCTCTTCATTGTGGAAGAAAAACATTGgt < 1:165306/251‑1 (MQ=255) taaAGCGAAAGCGCAGGGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCGATCTGCATAAAAAGCTGGCGATTGCTGCCTCTTCATTGTGGAAGAAAAACATTGgtg > 2:271053/1‑251 (MQ=255) gAAAGCGCAGGGAAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCGATCTGCATAAAAAGCTGGCGATTGCTGCCTCTTCATTGTGGAAGAAAAACATTGGTGTAAACg < 2:517750/251‑1 (MQ=255) aaaGCGCAGTGCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCGATCTGCATAAAAAGCTGGCGATTGCTGCCTCTTCATTGTGGAAGAAAAACATTGGTGTAAACGt < 2:272091/251‑1 (MQ=255) aaGCCCAGGGCAACATGTCCGCCTA‑GGTATACAATCCACCGTATACAGCTGGCGCAAAATTGACTCAGCCAGAATGGGTTGGCTTGATCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGCGTGA‑GCGGGTTATACCGCAGACAAACTGTTGACCAGCAACCTGTTGGATAACACTTTCGATCTACATAAAAAGCTGGCGATTGCTGACTCTTCATTGTGGAAGAAAAACATTGGTGTAAACGTc < 2:165517/251‑1 (MQ=255) gggCAACATGCCCGCCTATGTA‑TACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGTAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCGATCTGCATAAAAAGCTGGCGATTGCTGCCTCTTCATTGTGGAAGAAAAACATTGGTGTAAACGTCAAACTgg < 2:281022/251‑1 (MQ=255) gggCAACATGCCCGCCTA‑GGTATACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCGATCTGCATAAAAAGCTGGCGATTGCTGCCTCTTCATTGTGGAAGAAAAACATTGGTGTAAACGTCAAACTgg < 1:17498/251‑1 (MQ=255) ggCAACATGCCCGCCTATGGT‑TACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAAAACCTCCGATCTGCATAAAAAGCTGGCGATTGCTGCCTCTTCATTGT‑‑‑‑GAAAAACATTGGTGTAAACGTCAAACTGGTTAAc < 1:5777/251‑1 (MQ=255) | AGTGGTGAAATCGACATGACGAATAACAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCA‑GAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGT‑TACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGC‑TGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCGATCTGCATAAAAAGCTGGCGATTGCTGCCTCTTCATTGTGGAAGAAAAACATTGGTGTAAACGTCAAACTGGTTAAC > NC_000913/1301971‑1302441 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |