Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	339,935	C→T	A56V (GCC→GTC)	yahH →	putative uncharacterized protein YahH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	339,935	0	C	T	100.0%	96.2 / NA	40	A56V (GCC→GTC)	yahH	putative uncharacterized protein YahH
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (20/20);  total (20/20)

TTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAATTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTCTGGCGTTGGTCATAACCCCATCACCCTCTGTAGCGGACATAACAACATGAAAGAGCTTGTG  >  NC_000913/339690‑340179                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                     tttGCCTGCTTCGAGAAAGCCATTCGTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGGTAAGCGTAGCGCAT‑CAGGCATTTGtcac                                                                                                                                                                                                                                                   <  1:382673/249‑1 (MQ=255)  ttGCCTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGACGTCGGACCTGCATGTACATGCCGGATGCGGCGTGAGCGTCTTCTCCGGCCTACGAATGGCGCAGGAATCTGTAGGCCGGGTAAGCGTTGCGCCTTAGGCACTTGACACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGtcacca                                                                                                                                                                                                                                                 <  2:171220/250‑1 (MQ=18)           tCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAAGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTTTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATg                                                                                                                                                                                                                                       >  1:397292/1‑251 (MQ=255)            cGAGAAAGCCATTCTTGGATGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑CTATCCGGCCTACAAAAGGCGCCCGAATCTGGAGGCCTGATAAACGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATgc                                                                                                                                                                                                                                      >  2:366130/1‑251 (MQ=18)             gagaAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGCATGGCGCAAGAATCTGTAGGCCTGATAAGGGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATgcg                                                                                                                                                                                                                                     >  2:77089/1‑251 (MQ=255)               gaAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCCAGGAACTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCCCCATTGCAGGATgcggc                                                                                                                                                                                                                                   >  1:87526/1‑251 (MQ=18)               gaAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATgcggc                                                                                                                                                                                                                                   <  1:93039/251‑1 (MQ=255)                 aaGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGt                                                                                                                                                                                                                                 <  1:391917/251‑1 (MQ=255)                   gCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTg                                                                                                                                                                                                                                >  1:24609/1‑250 (MQ=255)                    ccATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTgaa                                                                                                                                                                                                                              <  1:308378/251‑3 (MQ=255)                        tCTTGGCTGCTGCGACAATTCCGGCGACTGACATACATGCTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGACAGGCGCCCGAATATGTAGGCCTGATAAGCGTGGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTTGCCCCC‑TTATTCCGCCTCCGAATGGCGCACGAATCTGCAGGCCGGCTGAACGTAGCGCAT‑CAGGCATTTGTGCCCATTGACGGATGCAGCGTGGACGcc                                                                                                                                                                                                                          >  2:37508/1‑251 (MQ=2)                               tGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTGTCACCATTGCCGGTTGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCCAGAATCCTTAGGCCTGATAAGCGTAGCGCCT‑CCGGCATTTGTCACCACTGCCGGATGCGGCGTGGaacccctttccc                                                                                                                                                                                                                   >  2:47332/1‑240 (MQ=17)                                      aaCGGTACGGCGTCTGGCCTACATGTTCATGCCGGATGCGGCGTGATCGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATGTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CATGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTAGCCGGCCTACg                                                                                                                                                                                                            <  1:282909/251‑1 (MQ=14)                                       aCGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCCGCCTACg                                                                                                                                                                                                            >  1:97133/1‑250 (MQ=255)                                         gTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGt                                                                                                                                                                                                         <  1:260671/251‑1 (MQ=255)                                            aCGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGAGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACCCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAACGTAGCGCAT‑CAGGAATTTGTCACCATTGCCGGATGCGGCGTGAACGACTTATCCGGCCTACGAGTGgc                                                                                                                                                                                                      >  2:442757/1‑251 (MQ=14)                                                       ccTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAAttgt                                                                                                                                                                                           <  1:192464/251‑4 (MQ=255)                                                         tACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGACTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGACAGCC‑TTATCCGTCCTACGAATGGCGCAAGAATTTGTAGGCCTGATAAGCGGAGCGCATTCAG‑CATTTGTCACCATTGACTGATGCGGCGGGGACCCCTTCTCCggtccacgcgtggggggagcatgtt                                                                                                                                                                                           >  1:235567/1‑226 (MQ=14)                                                                    gCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAACGTAGCGCCT‑CAGGCATTTGTCCCCCTTTCCGGATTCGGCGGTGACCCCTTTTCCCGCCTCCGTGTGGCGCGGGAAT‑TTTAGGCCTGATaacc                                                                                                                                                                             >  1:236759/1‑249 (MQ=11)                                                                             ggcgTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAAT‑TGTAGGCCTGATAAGCGTAGCGCAt                                                                                                                                                                    <  2:441825/251‑1 (MQ=9)                                                                                gtgtaCGCCTTATCCGGCCTTAGAATGGCGCAAGAATCTGTAGGCCCGAAAAGCGTTGCGGATCCGGCATTTGTCACCCTTGGCGGATGCGGCGGGAACGCCCTTA‑CCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCGCCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAAT‑TGTAGGCCTGATAAGCGTAGCGCATCAg                                                                                                                                                                 <  2:445827/247‑1 (MQ=11)                                                                                      gCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCAGGATGCGGCGTGAACACA‑TTATACGGCCTACGAATGGCGCAAGCATCTGTAGGCCTGATAAGCGTAGAGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGAGTGAACGCCTTATACGGCCTACGCGGGGCGCGAGAGT‑TGTAAGCCTGATAAGCAGAGCGCATCAGGCaga                                                                                                                                                            >  1:267241/1‑248 (MQ=11)                                                                                                gCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTCCGAGTGGCGGGAGGAT‑TGTAGGCCGGATAAGCGTAccgcctccggcggactggcgttggg                                                                                                                                                 >  1:191240/1‑230 (MQ=11)                                                                                                                             cTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCg                                                                                                                                                                                                                                           >  2:84582/1‑133 (MQ=255)                                                                                                                             cTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCg                                                                                                                                                                                                                                           <  1:84582/133‑1 (MQ=255)                                                                                                                                                                      aTGCGGCGTGCACGCC‑TTCTCAGTCTTAGGAATGTAGAAAGAATCTGGAGGCGGGATAAGCGGAGCTGGT‑CAGGCAGTTGTCTTCACTGCCGGATGGGGCGTGAACGCCTGATCCGGCCTACGAATGGCGCAAGAATCGGTAGGCCGGATAAGCGTAGCGCAGCAGGCAGTTGGCTCCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTGCGAGTGGCGCGATAATTGTAGGTCTGATAAGCGTAgc                                                                            <  2:364572/251‑1 (MQ=2)                                                                                                                                                                                        tATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAATTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTCTg                                                             <  1:47332/249‑1 (MQ=2)                                                                                                                                                                                        tATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAATTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTCTg                                                             <  2:267701/249‑1 (MQ=2)                                                                                                                                                                                              gCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGGGAATTGTAGGCCTGATAAGCGTAGAGCATCAGGCAGTCTGGCGTTGGt                                                     >  1:46632/1‑251 (MQ=11)                                                                                                                                                                                               ccTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAATTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTCTGGCGTTGGTc                                                    <  1:325921/251‑1 (MQ=255)                                                                                                                                                                                                 tACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGGGGCGCGAGAATTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTCTGGCGTTGGTCAt                                                  >  1:199900/1‑251 (MQ=255)                                                                                                                                                                                                   cGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAATTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTCTGGCGTTGGTCATaa                                                <  1:89022/251‑1 (MQ=255)                                                                                                                                                                                                               gaagcTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAATTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTCTGGCGTTGGTCATAACCCCATCACCct                                    <  2:339191/247‑1 (MQ=255)                                                                                                                                                                                                                 aTCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGCGTGGCGGGAGAATTGTAGGGCTGATAAGCGGTGCGCATCAGGCAGTCTGGCGTTGGTCATAAccccctcccccccc                                  >  1:407299/1‑241 (MQ=11)                                                                                                                                                                                                                     gTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAATTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTCTGGCGTTGGTCATAACCCCATCACCCTCTGTa                               <  1:263158/250‑1 (MQ=255)                                                                                                                                                                                                                         gCCTGATAAGCGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAATTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTCTGGCGTTGGTCATAACCCCATCACCCTCTGTAGCGGa                          <  2:222080/251‑1 (MQ=255)                                                                                                                                                                                                                                   cGTAGCGCAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAATTGTAGGCCTGATAAGCGTAGCGCATCAGGCCGTCTGGCGTTGGTCATAACCCCATCACCCTCTGTAGCGGACATaacaac                 >  1:254881/1‑250 (MQ=255)                                                                                                                                                                                                                                         gcAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACGAGTGGCGCGAGTATTGTTGGCCTGATAAGCGTAGCGCATCAGGCAGTCTGGGGTTGGTCATAACCCCATCACCCCCTGTAGCGGACATaacaactttaa            >  1:35059/1‑244 (MQ=14)                                                                                                                                                                                                                                          cAT‑CAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAATTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTCTGGCGTTGGTCATAACCCCATCACCCTCTGTAGCGGACATAACAACATGAAaga         <  1:445370/251‑1 (MQ=255)                                                                                                                                                                                                                                              cAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTGCGAATGGCGCAAGAATCTTTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAATTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTCTGGCGGTGGTCATAACCCCATCACCCTCTGTAGCGGACATAACAACATGAAAGAGCt      <  1:434886/251‑1 (MQ=17)                                                                                                                                                                                                                                                  cATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCCCCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAATTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTCTGGCGTTGGTCATAACCCCATCACCCTCTGTAGCGGACATAACAACATGAAAGAGCTtgtg  <  1:73791/251‑1 (MQ=255)                                                                                                                                                                                                                                                  cATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGGGAATTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTCTGGCGTTGGTCATAACCCCATCACCCTCTGTAGCGGACATAACAACATGAAAGAGCTtgtg  >  1:348467/1‑251 (MQ=255)                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                     TTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGACCTACATGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCC‑TTATCCGGCCTACGAATGGCGCAAGAATCTGTAGGCCTGATAAGCGTAGCGCAT‑CAGGCATTTGCCACCACTGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACGAGTGGCGCGAGAATCTGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTGTCACCATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGAGTGGCGCGAGAATTGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTCTGGCGTTGGTCATAACCCCATCACCCTCTGTAGCGGACATAACAACATGAAAGAGCTTGTG  >  NC_000913/339690‑340179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑