| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,061,935 | G→A | S46N (AGC→AAC) | torD → | trimethylamine‑N‑oxide reductase‑specific chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,061,935 | 0 | G | A | 96.2% | 144.0 / ‑7.2 | 54 | S46N (AGC→AAC) | torD | trimethylamine‑N‑oxide reductase‑specific chaperone |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (25/25); minor base C (0/2); total (26/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01 | |||||||||||
GGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAAT‑CATGACCACGCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCG > NC_000913/1061691‑1062179 | ggtggAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAAT‑CATGACCACGCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGaa < 2:97002/249‑1 (MQ=255) gtggAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAAT‑CATGACCACGCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAAccg < 1:96313/251‑1 (MQ=255) gtggAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAAT‑CATGACCACGCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAAccg < 1:302085/251‑1 (MQ=255) attacctcgcagccgTGGAGCGGGTGACGGCGTTTCACGGCCACGTGGAGATGGAGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGCGACAT‑CATGCCCACGCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGCTGGCTGAA‑TGGTTTTCGATGCTGAAAAACGAACCGCCGCTCACTgcgg > 2:194475/15‑251 (MQ=255) cagtgggacAGGTGACGGCGTTTAACGGCCCCGTGGCGCTGGTGGCGCCGAGCGACTATGTTCCCGCGTCGCAGGTGACAT‑CATGACCACGCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGCTGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGCAAAAAGAACCGCCGCTCCCTGCGGCGGGGaaacagc > 2:270001/9‑246 (MQ=255) ggaggggtggggggggTTTAACGCCCCCGTGGAGAGGGTGGGGCAGGGCGAATGTGTCCCCGCGTCGC‑GGTTAAATTCATGCCCAGGCTGACAGCACAA‑CAGATTGCTTGTGTTTCCGCCTGGCTAGCGCTGTTGTT‑CTCCCGTGAGCTGGACGAGGAACAACTGAGGAAAA‑TCGCCAGGGCGCAGATGGCTGAA‑TGTTTTTCGTTGCTAAAAAACGACCCGCCGCTCACTGCGGCGGTGAACGAGCTGGa < 2:294439/236‑1 (MQ=255) ggAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGGGGCGCAGGGCGAATATGTTCCCGCGTCGCAGGTGAAAT‑CATGACCCCGCTGACAGCAAAA‑CAGATTGCTTGTTTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCGGGACGAGGAACAACTGACGAAAA‑TCGCCAGGGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGa < 1:374034/251‑1 (MQ=255) gccGGCGTTAACCGGCCCCGTGGAGAGGGGTGCGCGGTGCTAATATGTCCCCGCGACGCAGTTGAAAG‑TAGGCCCACGCGTACAGCCAAA‑AAGATTGCCTGTGTTTGCGCCGGTCTAGCGCAGTGGTT‑CGCCCGGGGGCTGGACTATGAACAACTGAAGCAAT‑TCGCCGGTGCGCAGATGGGGGAA‑TGTTTTTCGTTGCTAAAAAAGGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTAt < 2:361988/249‑1 (MQ=255) cGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGCGAAAT‑CATGACCACGCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAC‑TGGTTTTCGTTGCTGACAAACGAACCGCCGCTCACTGCGGCGGGGGACGAGCTGGAAAACCGTAttt > 2:215755/1‑250 (MQ=255) aaCGGCACCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGCGAAAT‑CATGACCACGCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGCCGCAAA‑TCGCCAGTGCGCAGATGGCTGCA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCCCGCTg > 2:41883/1‑251 (MQ=255) cGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAAT‑CATGACCACGCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAAACGTATTGCCACGCTGACAGTACg > 1:404126/1‑251 (MQ=255) gagaTGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAAT‑CATGACCACGCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGCCGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TAGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGAc > 1:430106/1‑251 (MQ=255) gggCGCAGTGCGAATATGTCCCCGCTGCGCAGGTAAAAT‑CATGACCCCGTTGACAGCACAA‑CAGATTGCCTTTTTTTCCGCCGGGCAAGCGCATTTGTT‑CTCCCGTGAGTTGGACGATTAACAACTGACGCAAA‑TCCCCAGTGCGCAGATGGCTGAA‑TGGTTGGCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGccc < 1:32936/250‑1 (MQ=255) aGTGCGAATATGTTCCCGCGTCGCAGGTGAAAT‑CATGACCACGCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTgg > 2:17133/1‑251 (MQ=255) gCGAATATGTTCCCGCGTCGCAGGTGAAAT‑CATGACCACGCGGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGAAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAAc < 1:81921/251‑1 (MQ=255) tGTTCCCGCGTCGCAGGGGAAAT‑CATGACCACGCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCCAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGAGAACGAGATGGAAAACCGTATTTCCCCGCTGACAGTACGTGACGAAGCCCGTCTGGAATCGGCcgc > 2:113324/1‑251 (MQ=255) cGCAGGTGAAAT‑CATGACCACGCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTGGCGCAGTTGTT‑CCCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGGGCGCAGAGGGTTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCg < 1:244201/251‑1 (MQ=255) cAGGTGAAAT‑CATGACCACGCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGc > 1:294935/1‑251 (MQ=255) gggTGAAAC‑CAGGACCCCGCGGACACAACAA‑AAGATTGCCTGTGTTACCGCCTGGCTGCCGCAGTGGTT‑CTCCCGTGAGTGGGCCGATGAAAACCTGACGCAAT‑CCGCCAGGGCGCAGATGGCTAAA‑TGTTTTTCGTTGCTGAAAAAAGAGCCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGcc < 1:420645/250‑1 (MQ=255) aGGTGAAAT‑CATGACCACGCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGACCCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGcc > 1:309377/1‑251 (MQ=255) cATGACCCCGATGACAG‑ACAAACAGATTGCCTGTGTTTCCGCCTGGCTAGCGCAGTTGTT‑CCCCGGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCtga < 1:105023/251‑1 (MQ=255) cgatGACGGCACAA‑AAGGTTGCCGGTGTTTACGCCTGGCTAGCGCAGGTTTT‑CCCCCGTGAGCGGGACGATGAAAAACTGACGCAAA‑GCGCCAGGGCGCAGATGGGGGAA‑TGGTTTTCGTTGCTGAAAAACGAGCCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGac < 2:119003/248‑1 (MQ=255) gcggACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTGGCGCGGTTGTT‑CCCCCGTGAGCGGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGAGGGCTGAA‑TGGTTTTCGTTGCTGAAAACCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACg < 2:89199/178‑1 (MQ=255) gCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACg > 1:89199/1‑181 (MQ=255) cAGCACAA‑CAGTTGGCCTGGGTTAACGCCGGGCAAGCGCAGTTGTT‑TTCCCGTGAGCGGGACAATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCGGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGacaaacaa < 1:401666/251‑1 (MQ=255) aGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAATACGCGGAGATGCCCGTCAGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTTGTGACCGacaaaaa > 2:35932/1‑247 (MQ=255) ccacaacagtttgctgttttttccGCCTGGCTGGCGCAGTTGTT‑CTCCGGTGGGCGGGCCGATGAACAACTGACGAAAA‑CCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTAAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgc < 2:160796/228‑1 (MQ=255) acaa‑caGATTGCCTGGTTTTCCGCCTGGCTGGCGCAGTGTTT‑CTCCCGTGAGCGGAACGATGAACAACTGACTCAAA‑TCGCCAGTGCGCAGTTGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGATCCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgcgg < 1:373154/251‑1 (MQ=255) caa‑caGCTTTCCTGTGTTTACGCCTGGCCAG‑GCAGGTGTTTCCCCCGGGAGCTGGACGAAGAACATC‑GTAGCAAAATCGACGGTGCCGAGAGGGCTAAA‑GGGTTGTGGTTGCTGAAAATCGATCCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgcggc < 1:270001/251‑1 (MQ=255) caGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCt > 1:379337/1‑251 (MQ=255) ccTGGCTAGCGCAGGTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGACCCGCCGCTCACTGCGGCGGAGAACGAGATGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGCCAAACAAGCGGCCCTGCCGTATGCAACGGCCTAc > 2:281441/1‑251 (MQ=255) tGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAGCCGCCGCTCACTGCGGCGGGGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTCTGCATCGGCCcaca > 2:152096/1‑250 (MQ=255) tAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGCGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGAAGGTGCCCGTCTAGAACTGGCCGCGGTCTTTTGCGGCCTGTTTCTGATGACCGACAACCAAGCGGCGCTGCCGTATGCCTCGGCCTACaatc > 1:232125/1‑247 (MQ=255) aGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCCTCGGCCTACCAACAgg > 2:194621/1‑251 (MQ=255) ttgtt‑CTCCCGTGAGCTGGACAATGAACAACTGCCGCAAA‑TCGCCAGTGCGCAGATGG‑TGAAATGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGc < 1:141969/250‑1 (MQ=255) cccGTGAGCTGGACGATGAACAACTGACGCAAA‑CCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAagag < 1:31006/248‑1 (MQ=255) gAGCGGGACGATGAACAACTGACGAAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACg < 1:107124/251‑1 (MQ=255) gAGCGGGACGATAAACAACTGACGCAAA‑TCCCCAGTGCGCAGATGTCTAAA‑TGGTTTTCGTTGCGGAAAAACGATCCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACg < 1:56533/251‑1 (MQ=255) tGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTAATGCCACGCTGACAGAACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTTTGCATCGGCCTACAAACAGGAAGAGCAAGAGATTatgagaac > 1:250560/1‑243 (MQ=255) aacaacgaaagCAAA‑TCGCAAGTGCGCAGATGGCTGAA‑GTGTTTTCGTTGCAGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACTCTTGTTAGTTGAg < 1:141329/241‑1 (MQ=255) aacaacTGACGCACA‑TCGCCAGTGCGCAGAAGGCTGAA‑AGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGCTGCCCGTCTGGAACAGGCCGCGGACTTTTGAGGCCTGTTTCTGATGACCGACAAACAAACGGCGCTGCCGGATGCATCGGACTACAAACACGACGAGCAAGAGATTAAACGCTTGTTAGTTgcg > 2:291481/1‑249 (MQ=255) aactgtcgaaaaccgcaggTGCGCAGATGGTGGAA‑GTGTTTTCGGTGATGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCa < 2:78768/233‑1 (MQ=255) tGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGCGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCCAGAGCTTAAACGCTTGTTAGTTGAGGCAggg > 1:218012/1‑251 (MQ=255) aaa‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGCGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGGCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTCCAAACAGGACGAGCAAGGGATTAAACGCTTGTTAGTTGAGGCAGGGATggg > 2:438229/1‑249 (MQ=255) aaa‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGGTTCTGATGACCGACAAACAAACGGCGCTGCCGTATTCCTCGGCCTACAAACATGAAGCGCAAGCGATTAAACGCTTGTTAGTTGTGGCAgggaggga > 2:167589/1‑250 (MQ=255) cgcggtggcgcAGATGGCTGAG‑GGGTTTTCGTTGCAGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCGGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCa < 1:215755/244‑1 (MQ=255) ccccAGGGCGCAGATGGCTGAA‑GGGTTTTGTTTACTGAAAACGGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCa < 1:411444/249‑1 (MQ=255) ccAGGGCGCAGATGGAGGAG‑TGTTTTTCGGGGCTGAAAAACGACCCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACGTTTGCGGCCTGGTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGc < 2:232125/251‑1 (MQ=255) cAGAGGGCTGAA‑TGGTTTTCGTGGCGAAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAAttt < 2:108029/251‑1 (MQ=255) gCTGAA‑GGTTTTTCGTTGCTAAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGa < 1:194621/251‑1 (MQ=255) cTGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTAAGTGGCGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACCAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGCCGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCCATTTCAAcca > 2:300574/1‑248 (MQ=255) cTGAA‑TGGTTTTAGTTGATGAAAA‑CGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGGATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAAAGaa > 1:356096/1‑250 (MQ=255) tGAA‑TGGTTTTCGTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGGTGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGGTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTTAAAGAAc > 1:177586/1‑251 (MQ=255) tGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCCGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGCTGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCg > 1:226930/1‑251 (MQ=255) | GGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAAT‑CATGACCACGCTGACAGCACAA‑CAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTT‑CTCCCGTGAGCTGGACGATGAACAACTGACGCAAA‑TCGCCAGTGCGCAGATGGCTGAA‑TGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCG > NC_000913/1061691‑1062179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |