Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,568,3420CT78.0% 93.8 / 24.6 50G60S (GGC→AGC) mdtMmultidrug efflux pump/bile salt:H(+) antiporter/Na(+):H(+) antiporter/K(+):H(+) antiporter
Reads supporting (aligned to +/- strand):  ref base C (5/6);  new base T (17/22);  total (22/28)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.14e-01
Rejected as consensus: Frequency below/above cutoff threshold.

ATCGCCATCAACTTGATCCCTTTTGTCTGTCCGAACGCCTCCTGCACCGTGACATAACCAACGGTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAA‑AAAA‑CGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGG  >  NC_000913/4568098‑4568578
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                               
aTCGCCATCAACTTGATCCCTTTTGTCTGTCCGAACGCCTCCTGCACCGTGACATAACCAACGGTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTGGGAACGCGGCCCCCGCAGCCCCTGTAACGCCATACCGCCAGCa                                                                                                                                                                                                                                             >  2:143840/1‑249 (MQ=255)
  cGCCATCAACTTGATCCCTTTTGTCTGTCCGAACGCCTCCTGCACCGTGACATAACCAACGGTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGa                                                                                                                                                                                                                                          <  1:147479/250‑1 (MQ=255)
   gCCATCAACTTGATCCCTTTTGTCTGTCCGAACGCCTCCTGCACCGTGACATAACCAACGGTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGAt                                                                                                                                                                                                                                         >  1:106127/1‑250 (MQ=255)
      aTCAACTTGATCCCTTTTGTCTGCCCGAACGCCTCCTGCACCGTGACATAACCAACGGTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCCAGCAAGATagag                                                                                                                                                                                                                                     <  2:29094/251‑1 (MQ=255)
         aaCTTGATCCCTTTTGTCTGTCCGAACGCCTCCTGCACCGTGACATAACCAACGGTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACt                                                                                                                                                                                                                                  <  1:249950/251‑1 (MQ=255)
               aTCCCTTTTGTCTGTCCGAACGCCTCCTGCACCGTGACATAACCAACGGTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGgc                                                                                                                                                                                                                            >  1:216964/1‑251 (MQ=255)
                           tgtcCGAACGCCTCCTGCACCGTGACATAACCAACGGTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGcc                                                                                                                                                                                                                  >  1:250762/1‑249 (MQ=255)
                            gtcCGAACGCCTCCTGCACCGTGACATAACCAACGGTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCa                                                                                                                                                                                                                 <  1:86013/249‑1 (MQ=255)
                              ccGAACGCCTCCTGCACCGTGACATAACCAACGGTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGGCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGAc                                                                                                                                                                                                              <  1:396455/250‑1 (MQ=255)
                                     cctcctGCACCGTGACATAACCAACGGTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCg                                                                                                                                                                                                      <  1:143840/251‑1 (MQ=255)
                                       tcctGCACCGTGACATAACCAACGGTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGc                                                                                                                                                                                                    >  2:323005/1‑251 (MQ=255)
                                        cctGCACCGTGACATAACCAACGGTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCgg                                                                                                                                                                                                     <  1:79667/249‑1 (MQ=255)
                                         ctGCACCGTGACATAACCAACGGTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACAGACGGCAGCAGGGGCCAGACTGACATCGGCAt                                                                                                                                                                                                  >  1:207638/1‑251 (MQ=255)
                                            cACCGTGACATAACCAACGGTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCCAGCaa                                                                                                                                                                                                                                            >  1:430217/1‑206 (MQ=255)
                                            cACCGTGACATAACCAACGGTGGCAAGAAAACAGATACGGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTGGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAAGCAGCACCGGCCTGCGGCCAATTCTGGCGGAAAGCGGCCCCAGCAGCCACGGTAACGCCATACCGCCAGCaa                                                                                                                                                                                                                                            <  2:430217/206‑1 (MQ=255)
                                                         ccAACTGTGGTAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTTTGTCATAGACGTTGGGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACcac                                                                                                                                                                                  <  2:99373/251‑1 (MQ=255)
                                                              ggTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAACTCACGTACCACATTa                                                                                                                                                                              >  1:317269/1‑250 (MQ=255)
                                                                   aaaTAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGCCGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCCAGTACCACATTAATGATc                                                                                                                                                                        >  2:238556/2‑251 (MQ=255)
                                                                    aaTAAAACAGATACTGGTGCCCTGAATTGCAAGCGCGCTAAGAAACAGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCCAGGGTAAAAATTAGCGCACCGGTAATCAGCACCGGCCAGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATcc                                                                                                                                                                       >  2:288606/1‑251 (MQ=255)
                                                                       aaaaCAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATccc                                                                                                                                                                      >  1:97130/1‑249 (MQ=255)
                                                                                    gggCCCTGAAGGGCACGGGCGATAAGAAACTGTGTCATAGACGTTGTGAACAGTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCTGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGTGACTGACGGCAGCAGTGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAAGGATCCCAGGCTGGATCAGATc                                                                                                                                                       <  2:294645/249‑1 (MQ=255)
                                                                                                 cACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACGGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATAc                                                                                                                                          <  2:257131/251‑1 (MQ=255)
                                                                                                         aTAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTACCGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCaa                                                                                                                                   >  2:120069/1‑250 (MQ=255)
                                                                                                                          aGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGACCAGATCCGTCGACCGATACGCAGCAAAGTCATACAAAATCAACg                                                                                                                 >  2:353533/1‑251 (MQ=255)
                                                                                                                                   gAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGa                                                                                                        <  1:391232/251‑1 (MQ=255)
                                                                                                                                      cATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGaaaa                                                                                                     <  1:91266/251‑1 (MQ=255)
                                                                                                                                       aTTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCCGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAACGTCATACAAAATCAACGCCCTCGGGacaa                                                                                                     >  2:129450/1‑247 (MQ=255)
                                                                                                                                                gcgcAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTggc                                                                                           <  1:353533/251‑1 (MQ=255)
                                                                                                                                                   cAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTTCCACATTAAGGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTggcggc                                                                                        <  1:280759/251‑1 (MQ=255)
                                                                                                                                                           ggTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCggg                                                                                >  1:363153/1‑251 (MQ=255)
                                                                                                                                                                           ccGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGaaa‑aaaaaggggcct                                                               >  1:33333/1‑243 (MQ=255)
                                                                                                                                                                              gTAATAAGCACCGGCCTGCGGCCAATTCTGTCGGCAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGAGGCGGCATGGCGGGTAAA‑AAAA‑AGGGGCATaa                                                            >  1:326898/1‑250 (MQ=255)
                                                                                                                                                                               tAATCCGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAA‑AAAA‑AATGGCATaac                                                           >  1:366045/1‑250 (MQ=255)
                                                                                                                                                                                   cAGCCCCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAATATAGAGACTGACGGCAGCAGGGGCCATACTGACATCGGCATTAAAATCACGTACCACACTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCCGGTAAA‑AAAA‑CGTGGCATaacaaaca                                                      <  2:3984/251‑1 (MQ=255)
                                                                                                                                                                                                cGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAA‑AAAA‑CGTGGCATAACAAACAACTCCTTGTCCgg                                         <  2:317269/251‑1 (MQ=255)
                                                                                                                                                                                                    cAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAA‑AAAA‑CGTGGCATAACAAACAACTCCTTGTCCGGAGaa                                     <  2:242937/251‑1 (MQ=255)
                                                                                                                                                                                                           gTCGGAAAGCGGCACCAGCAGCCACGGGAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGAGCCGTCGACAGATACGCAGCAAAGTCATACAAAAACAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAA‑AAAG‑CGTGGCATAACAAACAACTCCTTGCCCGGAGAA‑CCCCAAc                             <  2:262597/251‑1 (MQ=255)
                                                                                                                                                                                                            tCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAACAAAA‑C‑CAGCCTCACAAACAAACCCTTCTCCGGAGAC‑CCCCaaac                            >  2:354691/1‑249 (MQ=255)
                                                                                                                                                                                                             cGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAA‑AAAA‑CGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAACgg                           <  1:95453/251‑1 (MQ=255)
                                                                                                                                                                                                              ggAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAA‑AAAA‑CGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAACggg                          <  1:51707/251‑1 (MQ=255)
                                                                                                                                                                                                                aaaGCGGCCCCAGCAGCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAA‑AAAA‑CGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAACGGGGa                        <  2:45387/251‑1 (MQ=255)
                                                                                                                                                                                                                         ccAGCAGCCACTGTAACGCCATTCCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCGCATTAATGGTCCCAGGCTTGATCAGATCCTTCGACAGATACGCAGCAGAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAA‑AAGA‑CGTGACATAACAAACAACGCCTTGTCCGGATAA‑CCCCAACGGGGAAAATGAAAt               <  2:157973/251‑1 (MQ=255)
                                                                                                                                                                                                                          cagcagCCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAA‑AAAAACG‑GGCATAACAAAAAAACCCCTGTCCGGGGAAACCCAAACGGGGaaacaaaatt               >  2:332481/1‑244 (MQ=255)
                                                                                                                                                                                                                            gcagcCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTCAA‑CAAA‑CAGGGCGTAAAAAACAACACCTTTTCCGGAGAA‑CCCCCACGGGGAAAACGAAAtta             >  2:238525/1‑249 (MQ=255)
                                                                                                                                                                                                                              agcCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGAAAA‑AAAA‑CGTGGCATAAAAAACAACCCCTTGTCCGGAGAG‑ACCCAACAGGGGAAACAAAAttaaa           >  1:37018/1‑247 (MQ=255)
                                                                                                                                                                                                                               gcCACTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAA‑AAAA‑CGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAACGGGGAAAACGAAATTCAATa         <  1:136510/251‑1 (MQ=255)
                                                                                                                                                                                                                                  aCTGTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAA‑AAAA‑CGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAACGGGGAAAACGAAATTCAATACCg      <  1:342851/251‑1 (MQ=255)
                                                                                                                                                                                                                                     gTAACGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAATTCATACAAAATCAACGCCAGCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAA‑AAAA‑CGTGGCATAACAAACAACTCCTTGGCCGGAGAA‑CCCCAACGGGGAAATCGCAATTCAATACCGTc    <  2:278697/250‑1 (MQ=255)
                                                                                                                                                                                                                                       aaCGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAA‑AAAA‑CGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCgg  <  1:336817/250‑1 (MQ=255)
                                                                                                                                                                                                                                       aaCGCCATACCGCTAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAAGCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAA‑AAAA‑CGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAACGGTGAAAACGAAATTCAATACCGTCgg  <  2:20607/250‑1 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                               
ATCGCCATCAACTTGATCCCTTTTGTCTGTCCGAACGCCTCCTGCACCGTGACATAACCAACGGTGGCAATAAAACAGATACTGGTGCCCTGAATTGCACGCGCGATAAGAAACTGTGTCATAGACGTTGTGAACATTGTCGCGGCGCAGGCAAGGGTAAAAATTAGCGCCCCGGTAATCAGCACCGGCCTGCGGCCAATTCTGTCGGAAAGCGGCCCCAGCAGCCACTGTAACGCCATACCGCCAGCAAGATAGAGACTGACGGCAGCAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAA‑AAAA‑CGTGGCATAACAAACAACTCCTTGTCCGGAGAA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGG  >  NC_000913/4568098‑4568578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑