| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,332,823 | 0 | A | G | 26.3% | 111.2 / 12.3 | 57 | intergenic (‑3026/+1513) | yfaQ/yfaT | tandem DUF2300 domain‑containing protein YfaQ/DUF1175 domain‑containing protein YfaT |
| Reads supporting (aligned to +/- strand): ref base A (9/33); new base G (15/0); total (24/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.93e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TGGCTCGTGCGGTCTTCGAGACGCAACCATTCATACGTAACAGGAACCTGTTTTGAAGATTCCAGCGCGGCATAACGGAACACAACCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTTTTACCGGCTCGCCATCCGGGTAGAGCAGTTGCAGTTTGCCGCTGACCGCTTCGCCAGTTTTGAACTCTTTTTTGGCGAGAGCTAAACCAATCTCG > NC_000913/2332580‑2333059 | tGGCTCGTGCGGTATTCGAGACGCAACCATGCATACGAAACAGGAACCTTTTTTGAAGATTCCAGCGCGGCATAACGGAACACAACCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTa < 2:251485/250‑1 (MQ=255) ggCTCGTGCGGTCTTCGAGACGCAACCATTCATACGTAACAGGAACCTGTTTTGAAGATTCCAGCGCGGCATAACGGAACACAACCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGGG‑Attttac > 1:25828/1‑248 (MQ=255) tGCGGTCTTCGAGACGCAACCATTCATACGTAACAGGAACCTGTTTTGAAGATTCCAGCGCGGCATAACGGAACACAACCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGGTTATCGGCGGCGGGGAA‑ATTTTACCCcacc > 1:282590/1‑250 (MQ=255) tCGAGACGCAACCATCCATACGTAACAGTAACCTGGTTTGAAGGTTCCAGCGCGGCATAACGGAACACAACCGACGCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCg < 2:209031/249‑1 (MQ=255) cGAGACGCAACCATTCATACGTAACAGGAACCTGTTTTGAAGATTCCAGCGCGGCATAACGGAACACAACCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACCAATAGCGGCTCGGTTTATCGGCGGCGGGGGG‑GTTTATAGCCCCATGACCGccc > 2:214217/1‑249 (MQ=255) cGAGACGCAACCATTCATACGTAACAGGAACCTGTTTTGAAGATTCCAGCGCGGCATAACGGAACACAACCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCt < 1:214217/250‑1 (MQ=255) agccGCACCCATTCATACGTACCGGGAACCTGTTTTGAAGATTTCAGCGCGGCATAACGGAACACAACCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑c < 2:62812/248‑1 (MQ=255) agaCGCAACCATTCATACGTAACAGGAACCTGTTTTGAAGATTCCAGCGCGGCATAACGGAACACAACCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAACGGATCGGTTTATCGGCGGCGGGGGG‑GGTTAAAGCCACAtaacacacggg > 2:356979/1‑241 (MQ=255) cAACCATTCATACGTAACAGGAACCTGTTTTGAAGATTCCAGCGCGGCATAACGGAACACAACCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGGG‑GTTTTACGCCACACGAccccacgcgtggg > 2:52678/1‑240 (MQ=255) aaCCATTCATACGTAACAGGAACCTGTTTTGAAGATTCCAGCGCGGCATAACGGAACACAACCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAAAAAATAGCGGCTCGGTTTATCGGCGGCGGGGGG‑ATGTAACGCCACAtacccggttgcgtcggg > 1:138848/1‑235 (MQ=255) aTTCATACGTAACAGGAACCTGTTTTGAAGATTCCAGCGCGGCATAACGGATCACAACCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACAcc < 1:36189/251‑1 (MQ=255) aGGAACCTGTTTTGAAGATTCCAGCGCGGCATAACGGAACACAACCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑tt < 1:52678/251‑1 (MQ=255) ccTGTTTTGAAGATTCCAGCGCGGCATAACGGAACACACCCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTGCGCTGCC‑TT‑CCAGc < 1:342305/251‑1 (MQ=255) cTGTTTTGAAGATTCCAGCGCGGCATAACGGAACACAACCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGGG‑GTTTTACGCCACATGGCCGCTGG‑CGTCGGGCACCGCTTCGCTGCC‑CT‑CCAGCg > 1:244019/1‑251 (MQ=255) aGCGCGGCATAACGGAACACAACCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTGTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTcc < 2:82234/251‑1 (MQ=255) aaCCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCACTGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGGG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGGCACCGTTTCGCTACC‑TT‑CCAGCGACAC‑GGGGGAAAGTCC‑GGCCTAACGCAAAACGTTAc > 1:439621/1‑251 (MQ=255) aaCCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTAc < 1:231954/251‑1 (MQ=255) gACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGAc < 1:386589/251‑1 (MQ=255) aCTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGCCGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGGG‑ATTTAAAGCCACATGCCCGCTGG‑GGTCGGGCACCGTTTCGCTTCC‑TT‑CCCGCGACAC‑GGGGAAACGTCC‑GGCATAACCCAAAACGTTACCGAcc > 1:392563/1‑251 (MQ=255) aCTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGAGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGGGGTTTTAACACC‑CAAGACCGCCGG‑CCTCGGACACCGTTTTGCTGCC‑TTTCCA‑CGAGAC‑GGGGGAACCTCC‑GGCATAACGCacaacgtttcccacc > 2:397520/1‑237 (MQ=255) cgccgcTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCAtt < 1:441102/251‑1 (MQ=255) gccgcTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAAGAGCGGCTCGGTTTAGCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTg < 1:292161/251‑1 (MQ=255) cgcTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACTATTGAt < 1:356979/251‑1 (MQ=255) gTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGa < 1:372080/250‑1 (MQ=255) gTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAg < 1:177400/251‑1 (MQ=255) tgtgCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGGG‑GTTTTACGCCCCAAGACCGCTGG‑CGGCGGGCCCCCTGTTGCCGGC‑TT‑CCCGCGACACCGGGGAAA‑GGCC‑GGCCTAAAGCAAAACGTTACCGACCCTTTATAATTGGTTAgcgcg > 2:363473/1‑251 (MQ=255) aCTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGGG‑GTTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGGAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTTAGCGCGCAAACTTAACt > 1:349909/1‑251 (MQ=255) cTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGGGGGGGG‑GTTTAAAGCCCCAAGACCGCTGGGCG‑CGGGCACCGGTTCGCATCC‑TT‑CCAGCGACAC‑CGGGGAACGGCC‑GGCCAAACGCAAAACGTTTCCGACCCTTGATAATTACTGacccggcaaaccttactg > 2:342975/1‑234 (MQ=255) ttAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGCCGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGGG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGAGACAC‑GGGGGAACGTCC‑GGCATAACGCAAAACGt > 1:283578/1‑210 (MQ=255) ttAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGGGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGt < 2:283578/210‑1 (MQ=255) gAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCAcgcg < 2:138848/251‑1 (MQ=255) gTAATGCGCCAGACCGCGGTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCggc < 2:114182/251‑2 (MQ=255) gTAATGCGCAAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGCGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGGTTATCGGCGGCGGGGAG‑GTTTAACGTCACATGACCGCTGG‑CGGCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGGAACGTCC‑GGCCTAACGCCAATCGTTAACGCCCATTGGTAATTGCTGCGCGCGCAAACTTAAACGCACGCggg > 1:20593/1‑251 (MQ=255) cgcCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑tttt < 2:302967/251‑1 (MQ=255) gcCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑ttttt < 1:405836/251‑1 (MQ=255) cAGACCGCGTGCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTTTTa < 2:12857/251‑1 (MQ=255) gACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTTTTAcc < 1:212465/251‑1 (MQ=255) gACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTTTTAcc < 2:24066/251‑1 (MQ=255) tGAGGATCTCTTTGGTGGTGGTGACGCGCTACGCCGCGCCGTCACTGGCGGAGACGGTTACCAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTTACGCCCCAAGACCCCCGG‑CCGCGGGCACCCCTTTGCCGCCCTT‑CC‑GCGCCCC‑CGGGAAAAGCCC‑GGCAAAACGCAAAACCTTACCCACCCTTTTAAATTGCTGAGCGCGCAAACTTAAACGCCCGCGGGcccttttttcccgcccccccacc > 2:440515/1‑229 (MQ=255) gAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGGG‑ATTTTACGCCACCAGACCGCTGG‑CGGCGGGCACCGGTTTGCTGCCCTT‑CC‑GCGACAC‑GGGGAAACGTCCCGGC‑CAAAGCCAATCGTTACCCAACATTTGTAATTTCTTCGCGCGCCAAATTAACAGCACCCGGGGA‑tttttttcccggtccccatccc > 2:257165/1‑235 (MQ=255) gAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTTTTACCGGCTCGCCATcc < 2:289090/250‑1 (MQ=255) ggATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGGG‑ATTTAACGCCACATGACCGCCGG‑CGTCGGACCCCGTTTTGCTGCC‑TT‑CCCGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGCCCCTTTGTAAATGCTGAGCGCGCAAACTTAACCTCACCCGGGCA‑t > 2:319733/1‑228 (MQ=255) ggATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑t < 1:319733/228‑1 (MQ=255) gggttgtggtgACGCGATACGCCGCGCCGTCACTTGCTGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGTCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CTGCGGACACCGTTGCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTGTTACCGGCTCGCCATGCTGGTAGAgcagt < 2:33163/246‑1 (MQ=255) gtggtggtgACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑TTTTAACGCCACCTGACCGCTGG‑CGGCGGACACCGCTTCGCCGCC‑TT‑TCAGCGCCAC‑GGGGAAAACTCC‑GGCATAACGCAAATCGTTACCGACCCTTTATAATTACTGAACGCGCAAACTTAACTGCACGCGGGCA‑TTTTTTACCGGCCCTCCCCCCGGGTAGCgcaggtg > 1:79115/1‑248 (MQ=255) ggtggtgACGCTATACGCCGCGCCGTCACTGGCGGAGTCGGTTAACAAATAGCGTCTCGGGTTAGCGGCGGCGGGGAG‑ATTTAACGCCACATTACCTCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAAGCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTGTTACCGGCTCGCCATCCGGGTATAgcagttgc < 1:295896/250‑1 (MQ=255) aTACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTTACGCCCAATTACCGCCGG‑CCGCGGACACCCTTTCGCTGCC‑CT‑CCCGCGACAC‑GGGGGAACGTCC‑GGCCACACGCCAATCGCTACCGGCCACTGATAATTGATTAGCGCGCCCACTTAAACGCACGCGGGCAATTTTTTAC‑GGCCCGCCCTCCCGGGAGAGCCgttgccggttgccggccg > 2:406523/1‑247 (MQ=255) gTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTTTTACCGGCTCGCCATCCGGGTAGAGCAGTTGCAGTTTGCCGCTGACCGCTTCGcaag < 1:144409/251‑4 (MQ=255) aCTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCTCATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTTTTACCGGCTCGCCATCCGGGTAGAGCAGTTGCAGTTTGCCGCTGACCGCTTCGCCAGttt < 2:87305/251‑1 (MQ=255) cGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTTTTACCGGCTCGCCATCCGGGTAGAGCAGTTGCAGTTTGCCGCTGACCGCTTCGCCAGTTTTGAAc < 1:3086/251‑1 (MQ=255) ggTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTTTTACCGGCTCGCCATCCGGGTAGAGCAGTTGCAGTTTGCCGCTGACCGCTTCGCCAGTTTTGAACTCttttt < 1:397857/251‑1 (MQ=255) tAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTTTTACCGGCTCGCCATCCGGGTAGAGCAGTTGCAGTTTGCCGCTGACCGCTTCGCCAGTTTTGAACTCTTTTTTg < 2:439621/250‑1 (MQ=255) aaCAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGACACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTTTTACCGGCTCGCCATCCGGGTAGAGCAGTTGCAGTTTGCCGCTGACCGCTTCGCCAGTTTTGAACTCtttttttgc > 1:382569/1‑248 (MQ=255) cAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCCGCGCCAC‑GGGGGAACGTCC‑GGCATAAAGCAAATCGGTTCCGACCCTTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTTTTAACGGCTCCCCATCCCGGGAGGGGAGTTGCAGTTTTGCGCCTACCGCTTCCCCCGTTTTTAACTCCTTTTTTGCgg > 2:304201/1‑250 (MQ=255) aTAGCGGCACGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCCGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCCTTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTTTTACCGGCTCGCCATCCGGGGAGAGGAGTTTCAGTTTGCCCCCGACCCCTTCGCCCGGTTTGTACTCTTTTTTGGCgag > 2:328147/1‑249 (MQ=255) gCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTGAACTGCACGCGGGCA‑TTTTTTACCGGCTCGCCATCCGGGTAGAGCAGTTGCAGTTTGCCGCTGACCGCTTCGCCAGTTTTGAACTCTTTTTTGGCGAGAGCTAAAc < 2:282590/251‑1 (MQ=255) tATCGGCGGCGGGGAG‑ATTTAAAGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTTTTACCGGCCCGCCATCCGGGTGGCGCAGTGGCAGTTTGCCGCTGACCGCTTCGCCAGATTTGTACTCTTTTTTTGGGGGAGGTACACCAATCTCg > 2:362470/1‑251 (MQ=255) | TGGCTCGTGCGGTCTTCGAGACGCAACCATTCATACGTAACAGGAACCTGTTTTGAAGATTCCAGCGCGGCATAACGGAACACAACCGACTCGCCGCTATTACTGTATTGTGCGGCAGTACTTAATGAGTAATGCGCCAGACCGCGTTCAATGAGGATCTCTTTGGTGGTGGTGACGCGATACGCCGCGCCGTCACTGGCGGAGACGGTTAACAAATAGCGGCTCGGTTTATCGGCGGCGGGGAG‑ATTTAACGCCACATGACCGCTGG‑CGTCGGACACCGTTTCGCTGCC‑TT‑CCAGCGACAC‑GGGGAAACGTCC‑GGCATAACGCAAATCGTTACCGACCATTGATAATTGCTGAGCGCGCAAACTTAACTGCACGCGGGCA‑TTTTTTACCGGCTCGCCATCCGGGTAGAGCAGTTGCAGTTTGCCGCTGACCGCTTCGCCAGTTTTGAACTCTTTTTTGGCGAGAGCTAAACCAATCTCG > NC_000913/2332580‑2333059 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |