| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,018,252 | 0 | G | A | 27.5% | 62.6 / 10.0 | 40 | E103K (GAA→AAA) | fliJ | flagellar biosynthesis protein FliJ |
| Reads supporting (aligned to +/- strand): ref base G (17/12); new base A (0/11); total (17/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.84e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CGCCTGCTGGGTGAAATGCGTCGCGGATGTCAGCAGGCGGAAGAACAGCTCAAAATGCTGATTGATTATCAGAATGAATATCGCAATAACCTCAACAGCGATATGAGTGCCGGGATAACCAGCAACCGCTGGATCAACTATCAGCAGTTTATCCAGACGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCAACTT‑AATCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTGACACCACCACATTGCCTGGCGGCAAAGCCAGCGATGCTGCACAAGATTTTCTCGCGTTGTTGAGCGAAGCATT > NC_000913/2018012‑2018495 | cgcCTGCTGGGTGAAATGCGTCGCGGATGTCAGCAGGCGGAAGAACAGCTCAAAATGCTGATTGATTATCAGAATGAATATCGCAATAACCTCAACAGCGATATGAGTGCCGGGATAACCAGCAACCGCTGTATCAACTATCAGCAGTTTATCCAGACGCTGGAAAAA‑GCCAGTGCTCAGCAT‑CGCCAGCAACTT‑AATCAGTTGTCTCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAaaca < 1:47190/251‑1 (MQ=255) ccggctgGGTGAAATGCGTCGCGGATGTCAGCAGTCGGAAGAACAGCTCAAAATGCTGATTGATTATCAGAATGAATATCGCAATAACCTCAACAGCGATATGAGTGCCGGGATAACCAGCAACCGCTGGATCAACTATCAGCAGTTTATCCAGACGCGGGAAAAA‑GCCATTACTCAGCAG‑CGCCAGCAACTT‑AATCAGTGGACGCAGAAAGTGGACATTGCCCTGAACGGTTTGCGAGAAAAAAaacaac < 2:205696/248‑1 (MQ=255) gcttggTGAAATGCGTCGCGGATGTCAGCAGGCGGAAGAACAGCTCAAAATGCTGATTGATTATCAGAATGAATATCGCAATAACCTCAACAGCGATATGAGTGCCGGGATAACCAGCAACCGCTGGATCAACTATCAGCAGTTTATCCAGACGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCAACTT‑AATCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGt < 2:180796/246‑1 (MQ=255) aaaaTGCTGATTGATTATCAGAATGAATATCGCAATAACCTCAACAGCGATATGAGTGCCGGGATAACCAGCAACCGCTGGATCAACTATCAGCAGTTTATCCAGACGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCAACTT‑AATCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACt > 1:170569/1‑251 (MQ=255) gattgattATCAGATTGAATATCGCAATAACCTCAACAGCGATATGAGTGCCGGGATAACCAGCAACCGCTGGATCAACTATCAGCAGTTTATCCAGACGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCAACTT‑AAGCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAAGCCACGGCCGCACTTCTTGCAg < 2:445715/251‑1 (MQ=255) aatgaatATCGCAATAACCTCAACAGCGATATGAGTGCCGGGATAACCAGCAACCGCTGGATCAACTATCAGCAGTTTATCCAGACGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCAACTT‑AATCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCg > 1:118368/1‑250 (MQ=255) tgaatATCGCAATAACCTCAACAGCGATATGAGTGCCGGGATAACCAGCAACCGCTGGATCAACTATCAGCAGTTTATCCAGACGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCAACTT‑AATCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATc > 1:102365/1‑251 (MQ=255) aaatATCGCAATACCCTCAACAGCGATATGAGTGCCGGGATAACCAGCAACCGCTGGATCACCTATCAGCAGTTTATCCAGACGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCAACTA‑AATCAGGGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCa < 1:155185/250‑1 (MQ=255) aaTAACCTCAACAGCGATATGAGTGCCGGGATAACCAGCAACCGCTGGATCACCTATCAGCAGTTTATCCAGAAGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCACCTT‑AATCAGTGGACGCAGACAGTTGACATTGCCCTGAACAGTTGGCGAGAAACAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAACACCGCCTCGATCAGaaaa > 1:30149/1‑247 (MQ=255) aTAACCTCAACAGCGATATGAGTGCCGGGATAACCAGCAACCGCTGGATCAACTATCAGCAGTTTATCCAGACGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCAACTT‑AATCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGACAAAgatg > 2:163668/1‑251 (MQ=255) tAACCTCAACAGCGATATGAGTGCCGGGATAACCAGCAACCGCTGGATCAACTATCAGCAGTTTATCCAGACGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCAACTT‑AATCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAgatgg > 1:382139/1‑251 (MQ=255) ccAACAGCGATAGGAGTGCCGGGATAACCAGCAACCGCTGGATCAACTATCAGCAGTTTATCCAGACGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCAACTT‑AATCAGGGGACGCAGAAAGTTGACATGGCCCGGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGCCACTGCAGGAACGGAAATCCAGGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAg < 2:28086/250‑1 (MQ=255) cggCGATATGAGTGCCGGGAAAACCAGCAACCGCTGGATCAACTATCAGCGGTTTATCCAGACGCTGGAAAAA‑GCCATTCCCCAGCAT‑CGCCAGCAACTT‑AATCAGTGGACGCAGAAAGTTGACATGGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAACCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCg < 2:232090/249‑1 (MQ=255) aGCGATATGAGTGCCGGGATAACCAGCAACCGCTGGATCAACTATCAGCAGTTTATCCAGACGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCAACTT‑AATCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGc > 1:392754/1‑251 (MQ=255) gCGATATGAGTGCCGGGATACCCAGCAACCGCTGGATCAACTACCAGCAGTTTATCCAGACGATGAAAAAA‑TCCATTACTCAGCAG‑CGCCAGCAACTA‑AACCAGTGGCCGCAGAAAGTTGACTTTGCCCTGAACAGTTGGCGAAAAAAAAAACATCGTTTCCAGGCCTGG‑CAGCCACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGcc < 1:194350/251‑1 (MQ=255) gATATGAGTGCCGGGATAACCAGCAACCGCTGGATCAACTATCAGCAGTTTATCCAGACGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCAACTT‑AATCAGCGGACGCAGAAAGTTGACATTACCCTGAACAGTTGGCGAGCAACAAAAAAACGTTTGCCGACCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGACAAAGATGGCTGCGTTCGccc > 1:299640/1‑250 (MQ=255) gCCGGGATAACCAGCAACCGCTGGACCAACTATCAGCAGTTTATCCAGACGCTGGAAAAA‑GCCATTCCTCAGCAT‑CGCCAGAAACTT‑AATCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTGGGCGAAAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCATTCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGcgccg < 1:49112/250‑1 (MQ=255) gggAAAACCAACAACCGCGGGTTAAACTACCAGCAGTTTACCCAGCCGCTGGAAAAA‑GCCATTCCCCCGAAT‑CGCCAGCACCTT‑AATCAGGGGACGCAAAAAGTTGACATTGCCATAAACATTTGGCGAGAAAAAAAACAAGTTTTGCAGGCCTGG‑CAGACACTCCAGGAACGGCAATCCACGGGGGCCCGTCTTGCAGAAACCCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCAt < 2:341356/251‑1 (MQ=255) gggATCAACTATCAGCAGTTTATCCAGACG‑TGGAAAAAAGCCATTACCCACCAT‑CGCCAGCAACTT‑AATCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCGGG‑CAGACACTGCAGGAACGGCAACCCACGGGGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGAtt < 1:214335/250‑1 (MQ=255) ggATCAACTATCGGAAGTTTACCCAGACGCGGAAAAAA‑GCCATTCCCCAG‑ATACGCCAGCAACTA‑AAGAAGTGGACGCAGAAAGTTGACATTGCCCGGACAAGTTGGGGAGAAAAAAAACAACGTTTGCGGCCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACGTCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGAt < 2:209577/249‑1 (MQ=255) gatcaacaaccagaggTTTATCCAACCGCTGGAAAAA‑GCAATTCCCCAGCAT‑CGCCAGAAACTT‑AATCAGTGGACGCAGAAAGTTGACATTGCCCTGAAAAGTTGGCGAAAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACGGCAGGAACGGCAACCCACGGCGGCACTGCTTGCAGAAACCCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCg < 2:392326/236‑1 (MQ=255) gcagTTTACCCATACGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCAACTT‑AATCAGTGGACGCAGAAAGTTGACATTGCCCGGAACAGTTGGCGAAAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGCCATCCCACGTCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCtt < 1:287307/251‑1 (MQ=255) ttATCCAGACGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCAACTT‑AATCAGTGGACGCAGAAAGTTGACATGGCCCGGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGCCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGAtt < 1:289819/250‑1 (MQ=255) cccAGACGCGGGAAAAA‑GCCATTACTCAGCAG‑CGCCAG‑AACTTGAACCAGTGGACGCAGAAAGTTGACATTGCCCGGAACAGTGGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACGGCAGGACCGGCAATCCACGGGGGCCCGGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGATTAccg < 2:110904/250‑1 (MQ=255) aCGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCAACTT‑AATCAGTGGACGCAAAAAGTTAACATTGCCCTGAACAGTTGGCGAAAAAAAAAACAACTTTTGCAGGCCTGG‑CAGACCCTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAAcc < 1:289507/215‑1 (MQ=255) aa‑GCCATTACTCAGCAT‑CGCCAGCAACTT‑AATCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCCCTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTGAcacc > 1:297013/1‑250 (MQ=255) cATTACTGAGCTT‑CGCCAGAAACTT‑AATCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGTCCTGC‑CAGACACTGCAGGACCGGCAATCCACGGCGGCACTGCTTGCAGAACACCGCATCGATCAGAAAAAGATGGATGAGTTCGCCAAGCACGCCGCCCTGAGGCAACCTGAATGAATCGCTTAGCGCCCTGGATTACCTCCGACGTTGAccccaccac > 2:50395/1‑251 (MQ=255) tACTCAGAAT‑CGCCAGCAACTT‑AATCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTGACACCACCACAtt > 2:157649/1‑251 (MQ=255) aaccagtgcaccaagaaattgaaCATTCCCCTGAACAGTGGGCAAAAAAAAAAACAACTTTTGCAGGCCGGG‑CGGCCTCCGCAGGCACGGCAACCCACGCCGCCATTGTTTGCAAAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAACCCTGAATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTGACACCACCACATTGCCTGGCGGCAAAGCCAGCGAt < 1:235929/229‑1 (MQ=255) aGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGATCGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTGACACCACCACATTGCCTGGCGGCAAAGCCAGCGAtgctg > 1:105493/1‑251 (MQ=255) tGGACGCAGAACGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAACACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTGACACCACCACATTGCCTGGCGGCAAAGCCAGCGAtgctgc > 2:67777/1‑250 (MQ=255) ggACGCAAAAAGTTGACATTGCCAGAAACAGTGGGAGAAAAAAAAAACAACGTGGGCAGGCCTGG‑CAGACACGGCGGGAACGGAAACCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTGACACCACCACATTGCCTGGCGGCAAAGCCAGCGATGCTGcac < 2:170569/251‑1 (MQ=255) cGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGATTACCGACGACGTTg > 2:242525/1‑206 (MQ=255) cGCAAAAAGTTGACATTCCCCGAAACAGTGGGCGAAAAAAAAACCAACGTTTGCAGGCCGGG‑CAGACACTGCAGGAACGGCAACCCACGGCGGCACTGCTTGCAAAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTg < 1:242525/206‑1 (MQ=255) aGAAAGTTGACATTGCCCTGAACAGTTGGCAAAAAAAAAAACAACTTTTGCAGCCCGGG‑CAGACCCTGCAGGACCGGAAACCCACGCGGGCACTGTTTCCAGAAACCCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTGACACCACCACATTGCCTGGCGGCAAAGCCAGCGATGCTGCACAAGAtt < 1:347028/251‑1 (MQ=255) tGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTGACACCACCACATTGCCTGGCGGCAAAGCCAGCGATGCTGCACAAGATTTTCTcgc > 2:440477/1‑251 (MQ=255) gactttGCCCTGAACATTGGGCAAAAAAAAAAACAAC‑TTTGCCAGCCTGGGCACACACGGCAGGACCTCCAACCCACGGCGGCACTTCTTCCAAAAACCCCCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTGACACCACCACATTGCCTGGCGGCAAAGCCAGCGATGCTGCACAAGATTTTCTcgcg < 1:373895/247‑1 (MQ=255) cAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCCCTGCTTGCAGAAAACCGCCTCGATCACAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTAACACCACCACATTGCCTAGCGGCAAAACCAGCGATGCTGCACAAGATTTTCTCGCGCTGTTGAGCGatgc > 1:15071/1‑248 (MQ=255) gTTGGCGAAAAAAAAAACAACTTTTGCGGCCCTGG‑CAGACACTGCAGGAACGGAAATCCACGGCGGCCCTGCTTGCAAAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTGACACCACCACATTGCCTGGCGGCAAAGCCAGCGATGCTGCACAAGATTTTCTCGCGTTGTTGAGCGAAGCAt < 1:293766/251‑1 (MQ=255) ttGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCCGAAAACCGCCTCGATCCGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTGACACCACCACATTGCCTGGCGACAAAGACAGCGATGCTGCACAAGATTTTCTCGCGTTGTTGAGCGAAGCAtt > 1:159968/1‑251 (MQ=255) | CGCCTGCTGGGTGAAATGCGTCGCGGATGTCAGCAGGCGGAAGAACAGCTCAAAATGCTGATTGATTATCAGAATGAATATCGCAATAACCTCAACAGCGATATGAGTGCCGGGATAACCAGCAACCGCTGGATCAACTATCAGCAGTTTATCCAGACGCTGGAAAAA‑GCCATTACTCAGCAT‑CGCCAGCAACTT‑AATCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGG‑CAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTGACACCACCACATTGCCTGGCGGCAAAGCCAGCGATGCTGCACAAGATTTTCTCGCGTTGTTGAGCGAAGCATT > NC_000913/2018012‑2018495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |