| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,315,606 | Δ12,255 bp | [yciF]–[btuR] | [yciF], yciG, trpA, trpB, trpC, trpD, trpE, trpL, rnm, yciO, yciQ, rluB, [btuR] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1315606 | 1327860 | 12255 | 30 [0] | [0] 30 | [yciF]–[btuR] | [yciF],yciG,trpA,trpB,trpC,trpD,trpE,trpL,rnm,yciO,yciQ,rluB,[btuR] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1315605 | 0 (0.000) | 29 (0.640) | 29/490 | 0.5 | 100% | coding (166/501 nt) | yciF | DUF892 domain‑containing protein YciF |
| ? | NC_000913 | 1327861 = | 0 (0.000) | coding (497/591 nt) | btuR | cobinamide/cobalamin adenosyltransferase | |||||
AAAAAGACCGTCGTCGCATGAAGGCGAATCAGATTCGTCGTGCGGTGAAACGTCACAGTCAGGTGAGCGGCGGTCGTCGTTCTGGCGGACGTAATAATAACGGTTAATCAAAGTATGCCGGACGTCATATCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCATATCCAGTGAGGAATCAGCAAGCATCCGCTTTGCATGTTGCCAGACTTCGCGGCAGGCGGCGGTATCAGACTCGCGGTTTTGTGTATCCCAGGTAAAGCCCGTTGCCATCACCT > NC_000913/1327621‑1328104 | aagcttcgctgctttacggtaacctaattgttcagccagcgtcgctaatgtcccgtaactggcaatctcataatgctcgactttctgtgctgcggcaatcagtgcggcatcacgcacttcgtttttctcggtactttcgatgacctcattagcttcttcaataagaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACa < 2:235279‑M2/11‑1 (MQ=255) agcttcgctgctttacggtaccataattgttcagcccgcgtcgctaatgtcccgtaactggcaatctcataatgctcgactttctgtgctgcggcaatcagtgcggcatcacgcacttcgtttttctcggtactttcgatgacctcattagcttcttcaataagaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACa > 2:276157‑M2/240‑250 (MQ=255) tcgctgctttacggtaacctaattgttcagccagcgtcgctaatgtcccgtaactggcaatctcataatgctcgactttctgtgctgcggcaatcagtgcggcatcacgcacttcgtttttctcggtactttcgatgacctcattagcttcttcaataagaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatactttcTCCCGATGACAACCa < 1:123212‑M2/15‑1 (MQ=255) aattgttcagccagcgtcgctaatggcccgtaactggcaatctcataatgctcgactttctgtgctgcggcaatcagtgcggcatcacgcacttcgtttttctcggtactttcgatgacctcattagcttcttcaataagaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCg < 2:384269‑M2/34‑1 (MQ=255) tcagccagcgtcgctaatgtcccgtaactggcaatctcataatgctcgactttctgtgctgcggcaatcagtgcggcatcacgcacttcgtttttctcggtactttcgatgacctcattagcttcttcaataataccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGCCCCGTGATAATCACCGTCTGTTg < 1:266785‑M2/41‑1 (MQ=255) agcgtcgctaatgtcccgtaactggcaatctcataatgctcgactttctgtgctgcggcaatcagtgcggcatcacgcacttcgtttttctcggtactttcgatgacctcattagcttcttcaataagaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGa < 1:107594‑M2/48‑1 (MQ=255) gctaatgtcccgtaactggcaatctcataatgctcgactttctgtgctgcggcactcagtgcggcatcacgcacttcgtttttctcggtactttcgatgacctcattagcttcttcaataagaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTc > 2:322797‑M2/198‑250 (MQ=255) gtcccgtaactggcaatctcataatgctcgactttctgtgctgcggcaatcagtgcggcatcacgcacttcgtttttctcggtactttcgatgacctcattagcttcttcaataagaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAAc > 1:65901‑M2/192‑251 (MQ=255) tcccgtaactggcaatctcataatgctcgactttctgtgctgcggcaatcagtgcggcatcacgcacttcgtttttctcggtactttcgatgacctcattagcttcttcaataagaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACg > 1:47265‑M2/191‑251 (MQ=255) gtaactggcaatctcataatgctcgactttctgtgctgcggcaatcagtgcggcatcacgcacttcgtttttctcggtactttcgatgacctcattagcttcttcaataagaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTg > 2:234589‑M2/187‑251 (MQ=255) taatgctcgactttctgtgctgcggcaatcagtgcggcatcacgcacttcgtttttctcggtactttcgatgacctcattagcttcttcaataagaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGt > 1:290953‑M2/171‑251 (MQ=255) tgcggcatcacgcacttcgtttttctcggtactttcgatgacctcattagcttcttcaataagaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTc > 2:373558‑M2/139‑249 (MQ=255) cacgcacttcggttttctcggtactgtcgatgacctcattagcttcttcaataagacctgccattgccacacatttcatgcgcttaattttcatgttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTCAGTtcatca < 1:276157‑M2/120‑1 (MQ=255) tctcggtactttcgatgacctcattagcttcttcaataagaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCATATcc > 2:165480‑M2/116‑250 (MQ=255) cggtactttcgatgacctcattagcttcttcaataagaccttccagtgccacacatttcatgcgctcaattttcaggtgcgattcggactcaacaacttgatcaatacgttcTCCCGATTACAACCACGACCCGTGATAATCACCGTCTGTTGATTTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAAGAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCATATCCAGTg < 1:445330‑M2/139‑1 (MQ=255) gtactttcgatgacctcattagcttcttcaataagaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCATATCCAGTGAg < 1:170329‑M2/141‑1 (MQ=255) ttcgatgacctcattagcttcttcaataagaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCATATCCAGTGAGGAAt < 1:218177‑M2/145‑1 (MQ=255) atgacctcattagcttcttcaataagaccttccattgccacacatttcatgcgcttaattttcaggttcgaatcagactcaacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTACAGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCAACCATATACGTCAGTTCATCAAGAAAAACCATATACAGTGAGAAATcaga > 1:276083‑M2/102‑249 (MQ=255) tagcttcttcaataagaccttccattgccacacatttcatgcgcttaatttgcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCATATCCAGGGAGGAATCAGCAAGCATCCGc < 2:206785‑M2/159‑1 (MQ=255) gcttcttcaataagaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCATATCCAGTGAGGAATCAGCAAGCATCCGCttt > 1:236328‑M2/90‑251 (MQ=255) ttcaataagacattccatggccacacctttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCAGTGATAATCACCGTCTGTTGCTGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCACATAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCATATCCAGTGAGGAATCAGCAAGCATCCGCTttgcctg > 2:214443‑M2/85‑248 (MQ=255) caataagaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCATATCCAGTGAGGAATCAGCAAGCATCCGCTTTGCATGtt < 1:349645‑M2/169‑1 (MQ=255) gaccttccattgccacacatttcatgcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAAACACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCATATCCAGTGAGGAATCAGCAAGCATCCGCTTTGCATGTTGcc > 2:397556‑M2/77‑248 (MQ=255) gcgcttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCATATCCAGTGAGGAATCAGCAAGCATCCGCTTTGCATGTTGCCAGACTTCGCGGCAGGCGGCGGTATCAg < 1:234589‑M2/199‑1 (MQ=255) gcttaattttcaggttcgattcggactccacaacttgatcaattcgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCATATCCAGTGAGGAATCAGCAAGCATCCGCTTTGCATGTTGCCAGACTTCGCGGCAGGCGGCGGTATCAGACt < 2:70265‑M2/202‑1 (MQ=255) cttaattttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCATATCCAGTGAGGAATCAGCAAGCATCCGCTTTGCATGTTGCCAGACTTCGCGGCAGGCGGCGGTATCAGACTc > 1:93637‑M2/49‑251 (MQ=255) ttcaggttcgattcggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCATATCCAGTGAGGAATCAGCAAGCATCCGCTTTGCATGTTGCCAGACTTCGCGGCAGGCGGCGGTATCAGACTCGCGGttt > 1:147943‑M2/42‑251 (MQ=255) ggactccacaacttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCATATCCAGTGAGGAATCAGCAAGCATCCGCTTTGCATGTTGCCAGACTTCGCGGCAGGCGGCGGTATCAGACTCGCGGTTTTGTGTATCCCAGGt > 1:50497‑M2/28‑251 (MQ=255) acttgatcaatacgttcTCCCGATGACAACCACGACCCGTGATACTCCCCGACTGTTGATGTGGACGTTCATTTACCGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATCCGCCACCATATACGTCAGTTCATCAAGCACAACCATATCCAGTGAGGAATCAGCAAGCATCCGCTTTGCATGTTGTCAGACTTCGCGGCAGGCGGCGGTATCAGACTCGCGGTTTTGTGTATCACAGGTAAAGCCCGtt > 1:27282‑M2/18‑251 (MQ=255) tacggtctCCCGATGAAAACCACGACCAGTGATATTCACCGTTTGGTGATGTGGACGTTCATTTAACGCCTGCACAACATCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCTTATCCAGTGAAGACTCAGCAAGCATCCGCTTTGCATGTTGCCAGACTTCGCGGCAGGCGGCGTGATCCGACTCGCGTTTTTGCGTATCCGAGGTAAAGCCCGGTGCCAGCACCt > 2:243298/8‑251 (MQ=255) | AAAAAGACCGTCGTCGCATGAAGGCGAATCAGATTCGTCGTGCGGTGAAACGTCACAGTCAGGTGAGCGGCGGTCGTCGTTCTGGCGGACGTAATAATAACGGTTAATCAAAGTATGCCGGACGTCATATCCGGCATTTTTACAGATTAATAATCGATCCCTATCTGCGCTTTTACACCGGCATCAAACGCATGTTTGACGGGGCGTAATTCACTTACCGTATCTGCCAGTTCAAGAATATCCCGATGACAACCACGACCCGTGATAATCACCGTCTGTTGATGTGGACGTTCATTTAACGCCTGCACCACTTCTTCCAGTGGCAAATAGTCATACGCCACCATATACGTCAGTTCATCAAGCAAAACCATATCCAGTGAGGAATCAGCAAGCATCCGCTTTGCATGTTGCCAGACTTCGCGGCAGGCGGCGGTATCAGACTCGCGGTTTTGTGTATCCCAGGTAAAGCCCGTTGCCATCACCT > NC_000913/1327621‑1328104 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |