| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,069,743 | C→T | A33T (GCA→ACA) | rutG ← | pyrimidine:H(+) symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,069,743 | 0 | C | T | 94.4% | 218.1 / ‑4.5 | 74 | A33T (GCA→ACA) | rutG | pyrimidine:H(+) symporter |
| Reads supporting (aligned to +/- strand): ref base C (1/3); new base T (45/22); total (46/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-01 | |||||||||||
GCAATGCTGATATTCGGGTTAATGCCC‑TGACCGTTAAAGCCCGTCGCGGCGATCACCACGCCGACAAAAGCCGCGCTGGAGCCGAGATAACTGGGGACGCGCCCGCCGGTAATAAAGAAAAACAGTAACGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATGAATCGCTTCGATGGCGCAAAACAGAATGTCGTGGGTGCCGACGCTCAC > NC_000913/1069505‑1069982 | gcAATGCGGATATTGGGGTTAATGCCC‑TGACCGTGAAAGCCCGTCGCGGCGACCACCCCCCCGAAAAAACCCGCGCGGGATCCGAGATAACTGGGGACGCGCCCGCCGGTAATAAAGAAAAACAGTAACGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCaaa < 1:464838/251‑1 (MQ=255) atatCGGGGTAATGCCCCTGCCCTTAAAAGCCCGCCGCGGCGACCCCCCCGCCGAAAAAAGCCGCGCTGAAGCCGAGAAAACGGGGAACGCGCCCGCCGGTAATAAAGAAAAACAGTAACGGGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCg < 1:515082/248‑1 (MQ=255) ggtttAATGCCC‑GAACCTTTAAACCCCGTCGCGGCGACCCCCCCCCCGACAAAAGCCGCGGTGGACCCGAGATATCGGGGGACGCGCCCGCCGGTAATAAAGAAAAACAGTAACGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATc < 2:468638/248‑1 (MQ=255) ggCCC‑TGACCGTAAAAGCCCGTCGCGGCAATCCCCACGCCGACAAAAGCCGCGCGGGAGCCGAGATAACTGGGGACGCGCCCGCCGGTAATAAAGAAAAACAGTAACGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGcgcg < 1:620940/250‑1 (MQ=255) ccGTTAAAGCCCGTCGCGGCGATCACCACGCCGACACAAGCCGCGCTGGAGCCGAGATAACTGGGGACGCGCCCGCCGGTAATAAAGAAAAACAGTAACGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCAGTAACACCGTTGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAAAGGCAATCGTTCTTCCGGCGCGACCAcgcc > 2:508687/1‑251 (MQ=255) cgcgGCGATCACCACGCCGACAAAAGCCGCGCTGGAGCCGAGATAACTGGGGACGCGCCCGCCGGTAATAAAGAAAAACAGTAACGTGCCGATCCCCGACATTCAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAgg > 1:383869/1‑251 (MQ=255) ccGACAAAAGCCGCGCTGGAGCCGAGATAACTGGGGACGCGCCCGCCGGTAATAAAGAAAAACAGTAACGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGcc > 1:643717/1‑250 (MQ=255) atccggcgtgtggcgaagaaatcggggggACGCCCACGACGGTAAAAAAGAAAACCAGTATCGTCCACATCCCCGACATTAAAATGGAAATATTGGGCTCCTGCCCAATTAAAATCGGAATTAACCCCGTCGCGCCAACCATCGCCACCGCGTGT‑TGAACGCCCTTTACGGTCGTTTGAGCAAGCGGCAATTTTTCATCCGGCGGGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGa < 2:326017/226‑1 (MQ=255) cgcTGGAGCCGAGATAACTGGGGACGCGCCCGCCGGTAATAAAGAAAAACAGTAACGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGCAAACCg > 1:145243/1‑251 (MQ=255) ccggcgctgaaaaaactgggggagccgcccgccGGAAAAAAAGAAAAACAGTAACGCGCCGATCCCCGACATTAAAATGGAAAGATTGGGTTCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCCCCTGTTGT‑TGAACGCTCATTCCTGTCGTCTGAGCAAACGACAATCTTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGa < 1:291443/226‑1 (MQ=255) ggAGCCGAGATAACTGGGGACGCGCCCGCCGGTAATAAAGAAAAACAGTAACGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAAc > 1:42818/1‑250 (MQ=255) ataaagtgggggccctgcccgccGGAAAAAAAGAAAAACAGTACCGGGCCGATCCCCGACATTAAAATGGAAAGATTGGTATCCAGCCCCATCAGAAGCGGCATTAACCCCGTCGCGCCAAACATCGCCACCGCGTTT‑TGAACGCCCATTTCTGTCGTCTGAGCAAACGGCAAGCGTTCATCCTGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACTGAACATTGCCAt < 2:42673/235‑1 (MQ=255) agaTAACTGGGGACGCGCCCGCCGGTAATAAAGAAAAACAGTAACGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCAt > 1:607179/1‑251 (MQ=255) aaaacggggcccgcccccgccGGTAATAAAGAAAAACAGTAACGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCATCCCCATCAGAATCGGCATTAACACCTTCGCGCCAAACATCGCCACCGCGTTT‑TGAACGCCCATTACGGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCa < 1:710077/236‑1 (MQ=255) gagagccacccgcaGGTAAAAAAGAAAAACAGAAACGTGCCGATCCCCGACATTAAAATGTAAATATGGGGATCCAGCCCCATCAGAATCGGCATTAACCCCTCCGCGCCAAACATCGCCTCCGCGTGT‑TGAACGCCCAGTACGGTCGGCTGAGCAAACGTCAATCGTTCATCCGGCGTAACCACGCCGCTCGCTGTAGAGGTCGATTTTAACTGCCAGTTAGGAAAACCGAACATTGCTATCAGCTGtct < 2:466736/243‑1 (MQ=255) cccgccGGTAAAAAAAAAAAACAGGAACGTGCAGATCCCCGACATTATGATGGAAAGATGGGTATCGAGCCCCAGCAAAGTCGGCATTACCACCGGCCCGCTAAACATTGCCGCCGC‑TGTGTGAACGCCCATTACTGCCGTCTGAGCAAACGGCAACCGTTCATCCGGCGCGTCCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAGACCGAACATTGCCATCAGCTGTCTCCTTAagt < 2:71861/251‑2 (MQ=255) gTAATAAAGAAAAACAGTACCGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTa > 2:662552/1‑250 (MQ=255) taataaAGAAAAACAGTAACGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGc > 2:635795/1‑200 (MQ=255) taataaAGAAAAACAGTAACGTGCCGACCCCCGACATTAAAATGGAAAGATTGGGAGCCAGCCCCATCAGAAGCGTCATTAACACCGTCCCGCCAAACACCGCCACCGCTTGT‑TGAACGCCCATTACTGCCTTCTGAGCAAACGGCAATCGTTCACCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGc < 1:635795/200‑1 (MQ=255) taaAGAAAAACAGTAACGTGCCGATCCCCGCCATTAAACTGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGCGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACa > 2:82423/1‑249 (MQ=255) aaaGAAAAACAGTAACGTGCCGAACCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCACCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTCCTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGc < 1:110124/251‑1 (MQ=255) aaaaaCAGTAACGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAggg > 1:282228/1‑251 (MQ=255) aaaCAGTAACGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGCACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGgcg > 2:126192/1‑251 (MQ=255) aGTAACGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATc > 2:189264/1‑251 (MQ=255) aGTAACGGGCCGTTCCCCGACATAAAAAGGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACCCCGTCGCGCCAAACATCGCCCCCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATc < 2:643717/251‑1 (MQ=255) aaCGCGCCGATCCCCGACATTAAAAGGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACCCCTTCGCGCCAAACATCGCCGCCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGGCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAgc < 2:231691/251‑1 (MQ=255) gCCGATCCCCGCCCTCAAAATGGAAAGATTGGTATCCAGCCACCTCAGAATCGGCATTAACACCGTCGCGCCAAACATCCCCACCGCGTGT‑TGAACGCCCCTTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGCGGTCGATTTTAACTGCCAGTGCGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTACCAAGCAGGGCGCATCAGCGCGTg > 2:717795/1‑251 (MQ=255) ccaaaccccGACATTAAAATGGAAAAATTGGGATCCAGCCCCATCAGAACCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCTTCCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGa < 2:115863/246‑1 (MQ=255) cGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCACACATCGCAACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGACAACCGAACATTGCCATCAGCTGTCTCCTTCAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGAt > 1:44761/1‑251 (MQ=255) ccGACATTAAAAGGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGGCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCTACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGc < 1:666895/251‑1 (MQ=255) cGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTCAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCg > 2:541913/1‑251 (MQ=255) gACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCg > 1:342507/1‑250 (MQ=255) tAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGa > 2:252265/1‑250 (MQ=255) aaaaTGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAAc > 2:498336/1‑251 (MQ=255) aaaaTGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTAGCGCCACACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGAGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGCGGTTCACAAGCAGGGCCCCTCAGCGCGTGATAACTGCGATCGAAc > 2:207444/1‑251 (MQ=255) aaTGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAAcc > 2:262033/1‑250 (MQ=255) aaaGATTGGGATCCAGCCCCATCAGAATCGGCATTCACACCGTCGCGCCACACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGCAAACCGAACATTGCCCTCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGTTAACTGCGATCGAACCACAcc > 2:659346/1‑250 (MQ=255) aGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGt > 1:395791/1‑225 (MQ=255) aGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGACGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAACCCGAACATGGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGACCGAACCACACCAGc > 1:713546/1‑251 (MQ=255) gatggggagccgcccccATCATAAACGGCATTAACCCCGTCGCGCCAAACACCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGcc < 2:261959/238‑1 (MQ=255) gATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGcc < 1:710389/251‑1 (MQ=255) ttGGGATCCAACCCCTTCCGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTCAGCACACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGCACATTGCCATCAGCTGTCTCCTTACGGAGGTTACCAAGCAGGGCGCATCAGCGCGTGCTAACTGCGCTCGAACCACACCAGCCCg > 2:106004/1‑251 (MQ=255) tGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGt > 1:577416/1‑251 (MQ=255) gATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACCTCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCACTCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAgg > 2:734426/1‑251 (MQ=255) acccAGCCCCATCAGAATCGGCATTACCCCCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCTTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAAcc < 1:704259/233‑1 (MQ=255) aTCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAAcc > 2:704259/1‑235 (MQ=255) cAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTATGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGggtgg > 2:722037/1‑250 (MQ=255) ccaacggAATCTGCATTAACACCGTCGCCCCAAACACCGCCCCCGCGTGT‑TGAACGCCCATGCCTGGCGTCTGAGCAAACGGCAATCTTGCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGggtgtggtgt < 2:44761/245‑1 (MQ=255) aTCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGgtgtggtgtg > 1:550642/1‑250 (MQ=255) tCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGAc > 1:738058/1‑251 (MQ=255) ccAGAACCGGCATTAACCCCGTCGCGCCAAACACCGCCACCGCGTGT‑TGAACGCCCATTACGGTTGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACGGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGAc < 2:342507/250‑1 (MQ=255) aGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGCGCAAACGGCAATCGTTCATCCGGCGCGCCCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTCGGGTGTGGTGTGACg > 1:68781/1‑250 (MQ=255) aTCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATg > 2:14943/1‑250 (MQ=255) aTCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGGGTGGTGTGACGATg > 2:329686/1‑250 (MQ=255) aTCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGCTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATg > 1:454977/1‑250 (MQ=255) aTCGGCATTAACACAGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGCGTGACGATg > 1:187705/1‑250 (MQ=255) ggCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGCAGGGTGTGGTGTGACGATGAATc > 2:484418/1‑251 (MQ=255) gCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATGAATCg > 1:212105/1‑251 (MQ=255) cATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATGAATCGc > 1:308330/1‑251 (MQ=255) cATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATGAATCGc < 1:226838/251‑1 (MQ=255) ttAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATGAATCGCtt > 1:124141/1‑251 (MQ=255) acCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATGAATCGCTTCGATg > 1:572775/1‑251 (MQ=255) gTCGCGCAAAACATCGCCCCCGCGTGT‑TGAACGCCCATTACGGTCGTCTGAGCAAACGGCAAGCGTTCACCCGGCGCGCCCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATGAATCGCTTCGATGgcg < 2:308330/251‑1 (MQ=255) cAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGCCCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATGAATCGCTTCGATGGCGCAAAACa < 2:42818/251‑1 (MQ=255) aaaCATCGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACCCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAACCCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGCCGCATCACCGCGTGATAACTGCGATCGAACCACACAAGCCCGTAGGGTTGGGGGTGACGATAACTCGCTTGGATGGCGCAAAAc > 2:567795/1‑249 (MQ=255) ccGCCACCGCGTGT‑TGAACGCCCATTACTGGCGTCTGAGAAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATGAATCGCTTCGATGGCGCAAAACAGAATGt < 1:252265/250‑1 (MQ=255) cGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGCGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATGAATCGCTTCGATGGCGCAAAACAGAATGTc > 2:523689/1‑251 (MQ=255) cGCCACCGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATGAATCGCTTCGATGGCGCAAAACAGAATGTc > 1:104925/1‑251 (MQ=255) ccGCGTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATGAATCGCTTCGATGGCGCAAAACAGAATGTCGTggg < 1:14943/251‑1 (MQ=255) cgcgTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAgggggt > 2:455360/1‑200 (MQ=255) cgcgTGT‑TGAACGCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGggtgt < 1:455360/203‑1 (MQ=255) tGAACGACCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCTTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATGAATCGATTCGCTGGCGCAAAACAGAATGTCGTGGGTGCCGACg > 2:349703/1‑251 (MQ=255) gCCCATTACTGTCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATGAATCGCTTCGATGGCGCAAAACAGAGTGTCGTGGGTGCCGACGCTcac > 1:605651/1‑251 (MQ=255) ccccATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATGAATCGCTTCGATGGCGCAAAACAGAATGTCGTGGGTGCCGACGCTcac < 1:64442/250‑1 (MQ=255) | GCAATGCTGATATTCGGGTTAATGCCC‑TGACCGTTAAAGCCCGTCGCGGCGATCACCACGCCGACAAAAGCCGCGCTGGAGCCGAGATAACTGGGGACGCGCCCGCCGGTAATAAAGAAAAACAGTAACGTGCCGATCCCCGACATTAAAATGGAAAGATTGGGATCCAGCCCCATCAGAATCGGCATTAACACCGTCGCGCCAAACATCGCCACCGCGTGT‑TGAACGCCCATTACTGCCGTCTGAGCAAACGGCAATCGTTCATCCGGCGCGACCACGCCGCTCTCTGTAGAGGTCGATTTTAACTGCCAGTGAGGAAAACCGAACATTGCCATCAGCTGTCTCCTTAAGGAGGTTAACAAGCAGGGCGCATCAGCGCGTGATAACTGCGATCGAACCACACCAGCCCGTAGGGTGTGGTGTGACGATGAATCGCTTCGATGGCGCAAAACAGAATGTCGTGGGTGCCGACGCTCAC > NC_000913/1069505‑1069982 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |