| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,529,039 | C→T | G402D (GGT→GAT) | sgcC ← | putative PTS enzyme IIC component SgcC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,529,039 | 0 | C | T | 98.6% | 218.8 / NA | 71 | G402D (GGT→GAT) | sgcC | putative PTS enzyme IIC component SgcC |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base T (36/33); minor base G (0/1); total (36/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGG‑CGATGACCGCTTTTTCCGTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTA > NC_000913/4528796‑4529285 | ttggcGATAACCCAGTTCATCCCCAACTGCGCATCAAAACGCGGGTCGCCGGGCAATGCACGTAGATGGCACATGG‑CGATGACCGTTTTTTCCGTCCCAATACCCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCGCGTTTACGTAAGAACAGCACGACGCTGGCGACAATC‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAAc < 1:720528/245‑1 (MQ=255) tGTCGATAACCCATATCATCCCCACCTCGGCATAAAAACGCGGGTCTCCGGGCATTTCCCGTATATGGCCCATGG‑CGATGCCCGCTTTTTCCGTCCCAATAACCTCTTT‑CAGCCAACTTATTGAAAGTAC‑TCCTGACACC‑GATAATCCTCTTTTTCGTAAGAACATCACGATTCGTGCGACAATC‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGCCATCAATTCATAAATCGACCAATCGAACat < 1:680534/250‑1 (MQ=255) gTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCAGGTCGCAGGGCAATGCACGAAGATGGCACATGG‑CGATGACCGCTTTTTCCGTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCCCGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATCATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACatat > 2:731296/1‑251 (MQ=255) cGATAACCCAGTTCCTCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGG‑CGATGACCGCTTTTTCCGTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTg > 1:101628/1‑251 (MQ=255) aaCCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGG‑CGATGACCGCTTTTTCCGTCCCAATAACCTCTTT‑CAGCCAACTCCTTGACAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATAGACCAATCGAACATATTGccc > 1:364249/1‑250 (MQ=255) ccAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGG‑CGATGACCGCTTTTTCCGTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGACCAGCACGACGCTGGCGACAATC‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGACATCACCCAATCGAACCTATTGCCCAccg > 2:450237/1‑249 (MQ=255) aGTTCATCCCAAACGGCGCATCAAACCTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGG‑CGATGACCGCTTTTTCCGTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTCC‑TCCTTATTCC‑GAAAATCCCCGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATAGTGCCCACGGAc < 1:543868/251‑1 (MQ=255) gTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGG‑CGATGACCGCTTTTTCCGTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGAc > 1:448148/1‑250 (MQ=255) ccccAACTGCGCATCAAACCTCGGGCCGCCGGGCAATGCCCGTAGATGGCACATGG‑CGATGACCGCTTTTTCCGTCCCAATACCCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATCCC‑GATAATTCACGTTTACGTAAGAACAGCCCGACGCGGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTg < 1:399429/251‑1 (MQ=255) ccAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGG‑CGATGACCGCTTTTTCCGTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTga > 2:399845/1‑250 (MQ=255) cAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGG‑CGATGACCGCTTTTTCCGTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTgcg > 2:405598/1‑248 (MQ=255) cagcAAACCTCGGGTCGCGGGGCATTACCGGTAGATGGCAC‑TGGTCCATGCCCGCTTTTCCCTTCCCAATAACCTTTGT‑CATCCACCGCATAGAAAGTAC‑TCCT‑ATTCCCTAAAATTCACTTTTACGAAAGAACACAACAACTCTGGCTACAATC‑CCGGCCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCATAACTCGACCAATCGAACATATTGCCCACGGACTACGCTGAGATTTGCGCa < 2:4675/248‑1 (MQ=255) aaccccGGGTCGCCGGGCAATGCACGTAGATGGCACATGG‑CGATGCCCGCTTTTCCCGTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATCCC‑GATAATTCCCGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTc < 1:310289/246‑1 (MQ=255) acaccGGGGCGCCGCGCAATGCACGTAGATGACACATGG‑CAATGACCGCTGTCTCCGTCCCAATAACCGCTGT‑CGGCCAACTCATTGAAAGTAC‑TCCTTAGCCC‑TATAATTCGCGTTTCCGTAAGAACAGCGCGACTCGGGCGACAATA‑CCTACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCa < 1:67958/247‑1 (MQ=255) aaCTCGGGTCGCCGGGCAATGCACGTAGAGGGCACAGGG‑CGATGACCGCTTTGTCCGGCCCAATACCCGTTTT‑CAGCCAACTAATTAAAAGTCC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCGGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCa < 1:472591/251‑1 (MQ=255) cTCGGGTCGCCGGGCACTGCACGTAGATGGCACATGG‑CGATGACCGCTTTTTCCGTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCACGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCAcc > 2:688445/1‑251 (MQ=255) ccGCCGGGCAATGCACGTAGAGGGCACATGG‑CGATGACCGCTTTTTCCGTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTCC‑TCCTTATCCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCGGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCaaa < 2:172976/250‑1 (MQ=255) gCACGTAGATGGCACATGG‑CGATGACCGCTTTTTCCGTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGcc > 2:409906/1‑251 (MQ=255) ggcccaTGG‑CAACGACCGCTTTTCCCGCCCCAA‑AACCCCTTTGCAGCCAACGCTTTGAAAGTAC‑CCCTTATCCC‑GAAAAGTCCCGTTTACGAAAAAGCAGCACGACGCTGGCAACAATC‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAAGTCAGAAATCGACCAATCGAACAGATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGcc < 1:447616/247‑1 (MQ=255) gCACATGG‑CGATGACCGCTTTTTCCGTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCACTCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGcc > 2:424773/1‑250 (MQ=255) cgattcccGCTTTCTCCCTCCCATTACCCTCTTC‑CAACCAACACATGGAATGTAC‑ACCTAATCCC‑AAAAATTCACGTTCACGCAAAAACAGCCCGAGGCGGGCGAAACTC‑CCGCCCGCCACGACAACGCCAATAACCCCAAGCGACATCAATTCAGAAATCGACCAATCGAAAATATTGCCCACGGACAACGCTGAGATTTGCGCACTTCCACCGGCAAAACTGAACCCGCCTTTGAGCGCCATATCAGTg < 2:419016/245‑1 (MQ=255) caggACCGCTTTTTCCGTCCCAAGACCCACTTC‑CACCCAACTCATTAAAAGTGC‑TCCTTAATCC‑GATAATTCACTTTTACTTAAGAATAGCACGTCGCTGGC‑AAAATATCCGACCGCCACTACAACGCCAATAAGCCCAGGCGACATCAATTCAGAAAGCGACCAATGGAACATATTGCCGCCGGACAACGGTGAGATTTGCGGTCTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGa < 1:78717/248‑1 (MQ=255) ccGCTTTTTCCGTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTa > 1:98890/1‑250 (MQ=255) tttttCCGTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGgcg > 2:380781/1‑251 (MQ=255) gTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTg > 2:150395/1‑251 (MQ=255) tCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTgg > 2:252461/1‑251 (MQ=255) cccAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTggg > 1:687489/1‑251 (MQ=255) ccTCTTC‑CAGCCAACTCATTAAAAGTAC‑TCCTTATTCC‑AATAATTCACGTTTACGTAAAAACAGCACGACGCTGGCGACAATC‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATc < 1:601387/251‑1 (MQ=255) ccTCTTC‑CAGCCAACTCATGAAAATTCC‑CCCTTACTCC‑AATAATACCGGTTTACGAAAGAACACCCCGCGGCTGGCGAAAATC‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAACCTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATc < 2:457437/251‑1 (MQ=255) ccacccAACTCATTGAAA‑TACCTCTTAATTCG‑GATAATTCCCTTTTACGAAAGAACAGCACGCCGCTGGGGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAgg < 1:399845/247‑1 (MQ=255) gAAAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCAc > 2:340235/1‑251 (MQ=255) tAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATg > 2:205221/1‑250 (MQ=255) aC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGAc > 1:308878/1‑251 (MQ=255) ccTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATTAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGAcccc > 1:231840/1‑251 (MQ=255) tATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGAAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATAACGATGACCCCGCt > 1:712382/1‑251 (MQ=255) tATTCC‑GAAAATTCGCGTTTACGAAAGAACGGCCCGCCGCGGGCGACAACC‑CCGCCCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTGGCGCACTTTCACCGGCAAAACGGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCGTCACGATGACCCCGc < 2:687489/250‑1 (MQ=255) aCGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCTGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTg > 1:276656/1‑250 (MQ=255) aCGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGACGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTg > 2:262998/1‑250 (MQ=255) tttACGTAAGACCAGCCCGACGCTGGCGACAATA‑CCGACCGCCAAGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGCGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGAcc > 2:725754/1‑250 (MQ=255) ttACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGAcc > 1:275747/1‑249 (MQ=255) aCGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGt > 1:49187/1‑251 (MQ=255) aGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCcg > 1:73676/1‑251 (MQ=255) aaaaGCACGACGCGGGCGACAATC‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACGGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCcgcg < 1:28955/248‑1 (MQ=255) cAGCACGACGCGGGCCAAAATC‑CCGCCCGCCACGACAACGCCAATAATCCAAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGt < 1:673746/251‑1 (MQ=255) caggacgCTGCCGACAATC‑CCGACCGCCACGACAGCGCCAATAATCCCAAGCGACATCAATACAGAAATCAACCAATCGAACATATTGCCCACGGAAAACGCTGAGATTTGCGCACTTGCACCGGCAAAACGGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGTTGGCGATCAGCAGGACGGGAATCAGCACGATGACCCCGCTTATGAACGGCTTGACCAGGTCTCCGCTGTGGa < 2:364249/248‑1 (MQ=255) gacgCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATa > 1:11408/1‑250 (MQ=255) cgcgggCGAAAATC‑CCGCCCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAAcc < 2:98890/247‑1 (MQ=255) cgCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCACGCGCCATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACACCGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAAcc > 2:56147/1‑251 (MQ=255) gCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCg > 1:230471/1‑251 (MQ=255) gctggcaaaaatcccaaccgCCACGACAACGCCAATAATCCCAAGCGCCATCAAGTAAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGTCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTACGCGGTGGATAACCg < 1:192567/235‑1 (MQ=255) gtcAATA‑CCGACCGCCACGACAACGCCAATAATCCCTAGCGACATCAATTCAGAAATCGACCAATCGCACATATTGCCCACGGACAACGCTGCGATTTGCTCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGCGGCGATCAGCAGGACGGTATTCATCCCGATGACCCCGCTTATCAACGTCCTGACCAGGACTCCGCGGTGGATAACCGTAGcc > 2:733914/3‑250 (MQ=255) caaccccaccagCCACGACAACGCCAATAATCCCAACCGACAACAATTCAGAAAGCGCCCAAGCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCATTTTCACCGTCAAAACTGAAACCGCCTTTGAGCGCCTGTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGAGGACCCCGCTTATCAGCGTCCTGACCAGGTCGCCGCTGTGGATTACCGTAGCCATa < 2:375409/240‑1 (MQ=255) aaacaccaaccgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGCCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATa < 2:135079/243‑1 (MQ=255) ccacccgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGAt < 2:475521/247‑1 (MQ=255) gtccgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGTTGAGATTTGCGCACTTGCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGTCGCGAACTGGGTGGCGAGCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATaa < 1:584378/249‑1 (MQ=255) gaccgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGCCCCCGCTTATCAACGTCATGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAgcta > 2:417312/1‑247 (MQ=255) accgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATaa > 2:121146/1‑250 (MQ=255) gcaactaCAACGCCAATAATCCCAAGCAACATCAATTCAGAAATCGACCAATCGAACATATGGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGaa < 1:13440/245‑1 (MQ=255) cAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCt < 1:409906/251‑1 (MQ=255) aaCGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTa < 1:380781/251‑1 (MQ=255) aagaatCCCAAGCGACATCAATGAAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCa < 2:73676/248‑1 (MQ=255) aCATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGt < 1:150395/251‑1 (MQ=255) cAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAac < 2:11408/250‑1 (MQ=255) tCAGAAATCGACCAATCGAACATATTGCCCCCGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACtt < 2:275747/250‑1 (MQ=255) agacaTCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGGAACAATttgt > 2:545405/5‑251 (MQ=255) aaaTCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGCAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCCTACAGATCAAGAACGTTGCTACCGGCAGGTTTGCTCGGGGTAACACTtttttg > 2:399617/1‑251 (MQ=255) cGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGGAACACTTTGTTGCCCg > 1:448115/1‑251 (MQ=255) gACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCgg < 1:340235/251‑1 (MQ=255) gACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACGGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCgg < 1:725754/251‑1 (MQ=255) aCCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGACTGAGGGGGGGAACACTTTTTTGCCCggg > 2:612301/1‑250 (MQ=255) ccAACCGAGCATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAACCTGAAACCGCCTTTGAGCGCCATTGCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGTTAATCATCACGATGACCCCACTTATCAACGTCCTGACCAGGTCTCCGCTTTTGATAACCGTAGCCATACAGATAAATATCGTTGCTTCCGGCAGGTCTGCGAGGGGTAACTCTTTGTTGCCCGGTa < 1:354462/251‑1 (MQ=255) | TTGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGG‑CGATGACCGCTTTTTCCGTCCCAATAACCTCTTT‑CAGCCAACTCATTGAAAGTAC‑TCCTTATTCC‑GATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATA‑CCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGTA > NC_000913/4528796‑4529285 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |