| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,227,339 | C→T | T369I (ACC→ATC) | ygjI → | putative transporter YgjI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,227,339 | 0 | C | T | 90.6% | 145.8 / ‑5.4 | 54 | T369I (ACC→ATC) | ygjI | putative transporter YgjI |
| Reads supporting (aligned to +/- strand): ref base C (0/5); new base T (26/22); total (26/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.11e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTCGGTCTGGTGTCCTTTACCGCGATGTTCGGTTCCCTGCTGATGTGGACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGCGAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTG > NC_000913/3227095‑3227581 | gTCGGTCTGGTGTCCTTTACCGCGATGTTCGGTTCCCTGCTGATGTGGACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCGGGATCTGATGAATACTATTATTAATATGAtcgccg < 1:298617/250‑1 (MQ=255) gTCTGGTGTACTTTACCGCGATGTTCGGGTCCCTGCTGATGTGGACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCg < 2:61426/251‑1 (MQ=255) tgtgtCCTTTACCGCGATGTTCGGTTCCCTGCTGATGTGGACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTGTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTc < 2:739118/248‑1 (MQ=255) ccTTTACCGCGATGTTCGGTTCCCTGCTGATGTGGACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCTGCGTCCAT‑GCt < 2:561851/250‑1 (MQ=255) ccTTTACCGCGATGTTCGGTTCCCTGCTGATGTGGACCGCAACGCCGGTGAAAATTTGCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGAGCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATTCTATTATGAATATGATCGCCGCAGCGTCCGT‑GCt < 2:505615/250‑1 (MQ=255) cgcgATGTTCGGTTCCCTGCTGATGTGGACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGCTGTATACTATTATTCATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGt > 2:666799/1‑251 (MQ=255) gcgATGTTCGGTTCCCTGCTGATGTGGACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGtt > 1:284881/1‑251 (MQ=255) cGGTTCCCTGCTGATGTGGACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATTCTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATtcatc < 1:278907/250‑1 (MQ=255) ggTTCCCTGCTGATGTGGACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGAGCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTcatcat < 2:284881/251‑1 (MQ=255) ccTGCTGATGTGGACCGCAACGCCGGTGAAAATTTTCTTCTCCGCAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTgg > 2:527555/1‑251 (MQ=255) tgGACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCa > 1:387348/1‑207 (MQ=255) tgGACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTGGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCGCGGTTCCAATACCGTGCAGGAGCTGATGAATACTAGTATGAATATGATCGCCGCa < 2:387348/207‑1 (MQ=255) ggACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCGCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGaa < 2:32794/250‑1 (MQ=255) aaCGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑Acgcg > 1:367914/1‑251 (MQ=255) ccGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCaa < 1:527555/251‑1 (MQ=255) cGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCaa > 1:408386/1‑250 (MQ=255) aaaTTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCAGCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGAt < 2:193412/251‑1 (MQ=255) tcttctCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCt < 2:559795/250‑1 (MQ=255) cttctCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGc > 1:632022/1‑251 (MQ=255) tctcCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGAGGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGcc < 1:539329/250‑1 (MQ=255) cccGAATTCCCGGAAGGCATCTGTGGTAAGAAAACCGGCGAACTGAACGAAAGCGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTCCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATCCCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCCCCAAATTAGATCACCTGCCAcg < 2:75324/250‑1 (MQ=255) cccGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCTCAGGGTGGATCCAGTTCCGGATAGTCATCCCGTTGATGATTATC‑CCGATGCTCTGTTCCAATACAGTGCAGGATCTGAGGAATACTATTATTAATATGATCGCCGCAGCGCCCAT‑GTTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCAcg < 2:326226/250‑1 (MQ=255) cGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCa < 2:410563/175‑1 (MQ=255) cGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCa > 1:410563/1‑175 (MQ=255) cGAAAGCCCGGAAGGCATCTTGGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGAGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCAcgcg < 2:455443/251‑1 (MQ=255) aaTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGAtt > 1:548613/1‑251 (MQ=255) ggaaggaaTCTTTGGTAAGAAAAACGACGAACTGAACGAAAAAGGCGTTCCGGCGCGCGCAGCGTGGATACAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCAAGCGATTTCCGt > 2:676741/1‑250 (MQ=255) ccGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGtatt > 1:492764/1‑251 (MQ=255) gAACTGAACGAAACCGGCGTTCCGGCGCGCGCAGCGTGGATCCCGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTa > 2:605740/1‑159 (MQ=255) gAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGAGGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTa < 1:605740/159‑1 (MQ=255) aCGAAACCGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTc > 2:352484/1‑250 (MQ=255) aCGAAACCGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGGGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGGTGTTTc > 2:141357/1‑250 (MQ=255) aaaccggcttcccGGCGCGCGCAGGGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTACC‑CCGAGGCTCGGTTTAAATCCCGGGAAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GTTCCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATg < 1:174075/240‑1 (MQ=255) aCGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTg > 2:577350/1‑251 (MQ=255) ggCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGAt > 2:570460/1‑251 (MQ=255) cGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATcgccgc > 1:478555/1‑115 (MQ=255) cGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATcgccgc < 2:478555/115‑1 (MQ=255) cGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGat > 2:625545/1‑250 (MQ=255) gcgccaggcgtggtcccAGTCCCTGATCGCCATCCCGCTGATGATTACC‑CCGATGCTCGTTCCCATTCCCGTGCGGGATCTGATGAATCCTTTTATAAATATGACCGCCCCAGCG‑CCATTGCTCCCGCCGTTTTTCATCATGCTGGCTTACCTAAATTT‑CCCCGCCAAATTAGATCCCCTGCCACGCGATTTCCGTATGAGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTg < 1:479720/236‑1 (MQ=255) gcAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGCTTGCGATATTTGCCGt > 2:138636/1‑251 (MQ=255) gggttCCAGTCCCTAATCGTCATCCCGCGGATGATTACC‑CCAATGCTGGGTTCCAATACCGTGAAGGATCTGATGAATACTATTATTAATAGGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTAGGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGtt < 1:576010/247‑1 (MQ=255) gttCCATTTCCTGATCGTACCCCCGCTGATGATTACC‑CCGATGTGTGGTTCAAATCCCGTCGAGGTTTTGATGAATTTTTTTATAAAGATGATCGCCGCAGCGCCCAT‑GCTTCCGCCGTTATTCATCATGCGGGCTTCCCTAAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGtttt < 2:405952/249‑2 (MQ=255) acactttccctgaccgtccccccGCTGATGATT‑TCTCCGCTGCTGGTTTCCAATCCCGGGGAGGATCTGATAAATTCTTTTATTAATATGTTCCCCGCAGCTTCCAT‑TCTCCCTCCGTTATTCATAATGCTGGCTTCCCAGAATTT‑ACGCGCCAAATTAGATCACCTGCCACTGGATTTCCGTATGGTTTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGt < 2:99922/231‑1 (MQ=255) cATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCg > 2:539662/1‑250 (MQ=255) gCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTACGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGgcg > 2:29196/1‑251 (MQ=255) tATC‑CCGATGCGGGTTTCAAATCCCGTGCAGGATTTGATAAATATTATTATTAATATGGCCGCCGCAGCGTCCGG‑TCTCCCGCCGTTTTTCACCATGCTGGCTT‑CCCGAATTTTGCGCGCCAAATTAGATCCCCTGCCACGCGATTTCCTTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCGTCGACATTCCCGACTGGCGCGAATAtt < 2:367914/250‑1 (MQ=255) cc‑ccGATGCTCGGTTCAAATACCGTGCAGATTTTGATAAATACTATAATTAAAATGATCGCCGCAGCTTCCAT‑GCTCCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCCCCTGCCACGCGATTTCCGTATGGGCCCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGCGAATATTCTg < 1:577350/250‑1 (MQ=255) cccgttgctgtgTTCCAATCCCGTGCAGGTTCGGATGAATCTTTTTATTAATTTGACCCCCGCAGCTTCCAT‑CCTTCCGCCGTTATTCATCATGCTGGTTTACCTGAATTT‑CCGCGCCAAATTAGATCCCCTGCCACGCAATTCCCTTGTGGCCTTCCGCCGCACCGGTATTATCTTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGCGAATATTCTGa < 1:305544/240‑1 (MQ=255) aTACCGTGAAGGATCTAATGACTACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGATTACCTGAATTT‑ACGCGCAAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGCGAATATTCTGACCATCATTTTTTATAAc > 2:689369/1‑251 (MQ=255) ccgggCAGGATCTGATGAATATTATTATTAAAATGACCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑CCGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACAGTCCCGACTGGCGCGAATATTCTGACCATCATTTTTTATAACGTc < 1:48680/247‑1 (MQ=255) gTGCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGCGAATATTCTGACCATCATTTTTTATAACGTcgg > 1:193634/1‑251 (MQ=255) gCAGGATCTGATGAATACTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGCGAATATTCTGACCATCATTTTTTATAACGTcggcg > 1:621161/1‑251 (MQ=255) cTATTATTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGAtt > 1:173620/1‑152 (MQ=255) tattatTAATATGATCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGCGACTATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTg > 1:456450/1‑251 (MQ=255) aaaTATGACCGCCGCAGCGTCCAT‑GTTTCCGCCTTTATTCATCATGCTGGTTTCCCTGATTTT‑ACGCGCCAAATTAGATCACCTGCCACGCGTTTTCCTTATGGCCCCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGCGAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTg < 2:677406/250‑1 (MQ=255) | GTCGGTCTGGTGTCCTTTACCGCGATGTTCGGTTCCCTGCTGATGTGGACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATC‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCAT‑GCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTT‑ACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGCGAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTG > NC_000913/3227095‑3227581 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |