Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,367,750	Δ176 bp		[pspF]	[pspF]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1367750	1367925	176	48 [0]	[0] 48	[pspF]	[pspF]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1367749	0 (0.000)	48 (0.670)	45/490	0.5	100%	coding (164/978 nt)	pspF	DNA‑binding transcriptional dual regulator PspF
	?	NC_000913	1367926 =	0 (0.000)					intergenic (‑14/‑153)	pspF/pspA	DNA‑binding transcriptional dual regulator PspF/phage shock protein A

CCAAACAGTTCGGAATCCAGCAGATTTTCATTTAACGCCGCGCAGTTAAGGGAAATAAACGGCCCTTGCCAACGGGAGGAGAGATAATGCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCGAAACCTGTTCCAGCACTTCGAGAAAGCTGTTCGCCTCACCAAGTAAATTATCTTTGTATTCTGCCATGATGAAATTCGCCACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGAT  >  NC_000913/1367677‑1368173                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                        atggttggctgccgccacctcgctccagttcaccgtactcaatcacgcgcaataatttcccctgcaccatcatcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacac                                                                                                                                                                                                                                                        <  2:606281‑M2/2‑1 (MQ=255)   ggttggctgccgccaacgcgctccagttcaccgtactcaatcacgcgcaataatttctcctgcaccatcatcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACtt                                                                                                                                                                                                                                                      <  1:48932‑M2/4‑1 (MQ=255)      tggctgccgccaacgcgctccagttcaccgtactcaatcacgcgcaataatttctcctgcaccatcatcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGt                                                                                                                                                                                                                                                    <  2:691440‑M2/6‑1 (MQ=255)           gccgccaacgcgctccagttcaccgtactcaatcacgcgcaataatttctcctgcaccatcatcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaactcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAgtgt                                                                                                                                                                                                                                              <  2:371319‑M2/12‑1 (MQ=255)             cgccaacgcgctccagttcaccgtactcaatcacgcgcaataatttctcctgcaccatcatcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTaa                                                                                                                                                                                                                                            <  1:155699‑M2/14‑1 (MQ=255)                 aacgcgctccagatcaccgtactcaatcacgcgcaataatttcccctgcaccatcatcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcgccggtaaacgcccccgcgtcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacTCTTGTTAGTGTAATTCg                                                                                                                                                                                                                                        <  2:93194‑M2/18‑1 (MQ=255)                      gctccagttcaccgtactcaatcacgcgcaataatttctcctgcaccatcatcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccgcgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAAGTCGCTAAc                                                                                                                                                                                                                                   <  1:686629‑M2/23‑1 (MQ=255)                        accagttcaccgtactcaatcacgcgcaataatttctcctgcaccatcagcggtgccgtagcgagttcatcaagaaatagcggaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcagttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTc                                                                                                                                                                                                                                 <  1:31‑M2/25‑1 (MQ=255)                                  cgtacgcaatcacgcgcaataatttctcctgcaccatcatcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCAt                                                                                                                                                                                                                       <  2:53496‑M2/35‑1 (MQ=255)                                        caatcacgcgcaataatttctcctgcaccatcatcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCt                                                                                                                                                                                                                 >  2:97193‑M2/211‑251 (MQ=255)                                        caatcacgcgcaataatttctcctgcaccatcatcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCt                                                                                                                                                                                                                 >  1:570284‑M2/211‑251 (MQ=255)                                                      aatttctcctgcaccatcagcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCaa                                                                                                                                                                                                    <  1:162303‑M2/54‑1 (MQ=255)                                                             cctgcaccatcatcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGAt                                                                                                                                                                                              <  1:225192‑M2/60‑1 (MQ=255)                                                                gcaccatcatcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCttt                                                                                                                                                                                          >  2:248399‑M2/187‑250 (MQ=255)                                                                 caccatcatcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTtat                                                                                                                                                                                        <  1:228274‑M2/66‑1 (MQ=255)                                                                   ccatcatcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATaa                                                                                                                                                                                      <  1:28782‑M2/68‑1 (MQ=255)                                                                        atcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcccgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgaagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCa                                                                                                                                                                                  >  2:280785‑M2/179‑250 (MQ=255)                                                                        atcggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCa                                                                                                                                                                                  >  1:272186‑M2/179‑250 (MQ=255)                                                                          cggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCaaa                                                                                                                                                                                >  1:6158‑M2/177‑250 (MQ=255)                                                                          cggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCaaa                                                                                                                                                                                >  2:443615‑M2/177‑250 (MQ=255)                                                                           ggtgccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcgtcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCaaaaa                                                                                                                                                                              <  2:244769‑M2/76‑1 (MQ=255)                                                                           ggtgccgcagcgagttcatcaagaaatagcgtaccgccgtcggaacgttcaaatctccctggatgacgattttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAAATCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCaaaa                                                                                                                                                                               >  2:613428‑M2/176‑250 (MQ=255)                                                                              gccgtagcgagttcatcaagaaatagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGAt                                                                                                                                                                           <  1:102160‑M2/79‑1 (MQ=255)                                                                               cctgagcgagttcatcaagaaatagcgtaccgccgtctgcacgttcaaagctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggccctttccaacACTTGTTAGTGTAATTCTCTAACTCATCCTGGAATGTTGCTGTTGATTCTTCAATCAGATCTGTATAAATCAAAAAGATa                                                                                                                                                                          <  2:47313‑M2/80‑1 (MQ=255)                                                                                                    atagcgtaccgccgtcggcacgttcaaatctacctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGt                                                                                                                                                     <  1:350265‑M2/101‑1 (MQ=255)                                                                                                     tagcgtaccgccgtcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGATAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGt                                                                                                                                                     >  1:605305‑M2/150‑250 (MQ=255)                                                                                                           accgccggcggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGAGCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAAc                                                                                                                                               <  1:484027‑M2/107‑1 (MQ=255)                                                                                                                    ggcacgttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagcttttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTcagc                                                                                                                                       >  1:701169‑M2/135‑249 (MQ=255)                                                                                                                         gttcaaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccgtgccaacACTTGGTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCGTCAGGCAGATCTTTATAAAGCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTGCAGCAGGACaa                                                                                                                                <  1:52333‑M2/122‑1 (MQ=255)                                                                                                                            caaatctccctggatgacgtttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATcc                                                                                                                             <  1:629476‑M2/125‑1 (MQ=255)                                                                                                                                             cgtttttgcgcaccagtaaacgcccccgcttcgtgaccaaacagttcggattccagcagattttcatttaacgccgcgcagttaagggaaatacacggcccttgccaacACTTGCTAGTGTAATTCGCTAACTCCTCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAACGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAAtcagg                                                                                                            >  2:23319‑M2/110‑249 (MQ=255)                                                                                                                                               tttttgcgcaccggtaaacgcccccgcttcgtgaccaaacagttcggcatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAag                                                                                                            >  1:546049‑M2/108‑249 (MQ=255)                                                                                                                                                         ccggtaaacgcccccgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACAtt                                                                                                 >  1:344506‑M2/98‑250 (MQ=255)                                                                                                                                                               aacgcccccgcttcgtgaccaaaccgttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGt                                                                                           >  1:96143‑M2/92‑250 (MQ=255)                                                                                                                                                                       cgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTtct                                                                                  >  1:236426‑M2/84‑251 (MQ=255)                                                                                                                                                                       cgcttcgtgaccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTtct                                                                                  <  2:570284‑M2/168‑1 (MQ=255)                                                                                                                                                                                 ccaaacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCTTTGCCg                                                                        <  1:220877‑M2/178‑1 (MQ=255)                                                                                                                                                                                    aacagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCTTTGCCGACa                                                                     <  1:673818‑M2/181‑1 (MQ=255)                                                                                                                                                                                      cagttcggaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCTTTGCCGACATc                                                                   >  2:157022‑M2/69‑251 (MQ=255)                                                                                                                                                                                             gaatccagcagattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCTTTGCCGACATCGTGAATg                                                            <  2:701096‑M2/190‑1 (MQ=255)                                                                                                                                                                                                      agattttcatttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCTTTGCCGACATCGTGAATGCCAACATCa                                                   <  2:5664‑M2/199‑1 (MQ=255)                                                                                                                                                                                                             catttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGctc                                             <  2:6158‑M2/205‑1 (MQ=255)                                                                                                                                                                                                                ttaacgccgcgcagttaagggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGtt                                         >  2:39614‑M2/43‑251 (MQ=255)                                                                                                                                                                                                                            agttaagggaaataaacggcccgtgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCGTGGCCGACATCGTGAATGCCAACATCAACGCTCTGGTAGAGGAAGCGGa                             <  1:613428‑M2/221‑1 (MQ=255)                                                                                                                                                                                                                                 agggaaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGa                             >  1:136800‑M2/26‑246 (MQ=255)                                                                                                                                                                                                                                     aaataaacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCcac                     >  2:196276‑M2/22‑250 (MQ=255)                                                                                                                                                                                                                                          aacggcccttgccaacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAACGCGGAAGATCCACAGAAAc               >  2:77976‑M2/17‑251 (MQ=255)                                                                                                                                                                                                                                                       aacACTTGTTAGTGTAATTCGCTAACTCATCCTGGCCTGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACATAAACTGGTTCGTCtgat  >  2:193322‑M2/4‑251 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                        CCAAACAGTTCGGAATCCAGCAGATTTTCATTTAACGCCGCGCAGTTAAGGGAAATAAACGGCCCTTGCCAACGGGAGGAGAGATAATGCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCGAAACCTGTTCCAGCACTTCGAGAAAGCTGTTCGCCTCACCAAGTAAATTATCTTTGTATTCTGCCATGATGAAATTCGCCACTTGTTAGTGTAATTCGCTAACTCATCCTGGCATGTTGCTGTTGATTCTTCAATCAGATCTTTATAAATCAAAAAGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGAT  >  NC_000913/1367677‑1368173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑