Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 1,679,563 (TATCACGTTTTAATCACTGGATATCGATGGAAA)1→2 coding (7/1383 nt) ydgI → putative arginine:ornithine antiporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1679531 =8 (0.110)37 (0.510) 35/492 0.8 80.4% intergenic (+160/‑26) ydgH/ydgI DUF1471 domain‑containing protein YdgH/putative arginine:ornithine antiporter
?NC_000913 = 1679563 10 (0.140)coding (7/1383 nt) ydgI putative arginine:ornithine antiporter

AGTGGCAGGAACGTGGTAATAACCTGACCGTCAGCGCAGATCTGTATAAATAACTATTCAGTTACTCCTATAAGGCGGCTTGATGCCGCCTTTCGCATTTTTAGTCACAAATTTCCCCGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTCCCGAACTTGACGGCGGTATCTTTACCTATGCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTT  >  NC_000913/1679319‑1679812
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                         
aGTGGCAGGAACGTGGTAATAACCTGACCGTCAGCCCAGATCTGTCTAAATAACTATTCAGATACCCCTCTAAAGCGGCTTGATGCCGCCTTTCGCATTTTTAGTCACAAATTTCCCCGCGCCCAATGCATGCCGCCACATCTCTTCCTAAAATCCCGCCCTTCAGGGGCCAACCACCTTTTTTTGCTTTTTGCCCTAATATTTATTCTTCTTATCCCGTTTTAATCACCGGATATCGGTGGaaatatacc                                                                                                                                                                                                                                                     >  2:311307/1‑245 (MQ=255)
 cgcagatctgtataaataactattcaggtactcctataaggcggcttgatgccgcctttcgcatgtttagtcacaaatttccccgcgaccattgcatgcagacacatctcttcgtaaaatcccgctcttcagtggcaaactccagttttaggcgttttgccctaatatttattcgtcttatcacgtgttaatcactggatatcgatggaaaTATCACGTTGTAATCTCTGGATATCGATGGAAAAGAAACt                                                                                                                                                                                                                                                    >  2:352581‑M1/212‑251 (MQ=255)
  gcagatctgtataaataactattcagttactcctataaggcggcttgatgccgcctttcgcatttttagtcacaaatttccccgcgaccattgcatgcagacacatctcttcgtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTg                                                                                                                                                                                                                                                   <  1:701275‑M1/41‑1 (MQ=255)
            gTGGTAATAACCTGACCGTCAGCGCAGATCTGTATAAATAACTATTCAGTTACTCCTATAAGGCGGCTTGATGCCGCCTTTCGCATTTTTAGTCACAAATTTCCCCGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcact                                                                                                                                                                                                                                         <  1:130007‑M2/251‑19 (MQ=255)
                    aaCCTGACCGTCAGCGCAGATCTGTATAAATAACTATTCAGTTACTCCTATAAGGCGGCTTGATGCCGCCTTTCGCATTTTTAGTCACAAATTTCCCCGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcg                                                                                                                                                                                                                                 <  1:534982‑M2/251‑27 (MQ=255)
                         gACCGTCAGCGCAGATCTGTATAAATAACTATTCAGTTACTCCTATAAGGCGGCTTGATGCCGCCTTTCGTATTCTTAGTCACAAACTTCCCCGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTGAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatgg                                                                                                                                                                                                                             >  1:361282‑M2/1‑220 (MQ=255)
                              actcctataaggcggcttgatgccgcctttcgcatttttagtcacaaatttccccgcgaccattgcatgcagacacatctcttcgtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTa                                                                                                                                                                                                                        >  1:234042‑M1/183‑250 (MQ=255)
                                  cgcAGATCTGTATAAATAACTATTCAGGTACTCCTATAAGGCGGCTTGATGCCGCCTTTCGCATGTTTAGTCACAAATTTCCCCGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCTCTTCAGTGGCAAACTCCAGTTTTAGGCGTTTTGCCCTAATATTTATTCGTCTTATCACGTGTTAATCACTGGATATCGATGGAAAtatcacgttgtaatctctggatatcgatggaaaagaaact                                                                                                                                                                                                                   >  2:352581‑M2/1‑211 (MQ=255)
                                   tataaggcggcttgatgccgcctttcgcatttttagtcacaaatttccccgcgaccattgcatgcagacacatctcttcgtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGc                                                                                                                                                                                                                  <  2:61144‑M1/74‑1 (MQ=255)
                                   gcAGATCTGTATAAATAACTATTCAGTTACTCCTATAAGGCGGCTTGATGCCGCCTTTCGCATTTTTAGTCACAAATTTCCCCGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactg                                                                                                                                                                                                                  <  1:701275‑M2/251‑42 (MQ=255)
                                         gcggcttgatgccgcctttcgcatttttagtcacaaatttccccgcgaccattgcatgcagacacatctcttcgtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATg                                                                                                                                                                                                            >  1:420890‑M1/172‑251 (MQ=255)
                                                gatgccgcctttcgcatttttagtcacaaatttccccgcgaccattgcatgcagacacatctcttcgtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTATTCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCCCCGCGCTGGTATTAAGCTCAATGCTGGgcg                                                                                                                                                                                                     <  2:590127‑M1/87‑1 (MQ=255)
                                                gatgccgcctttcgcatttttagtcacaaatttccccgcgaccattgcatgcagacacatctcttcgtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGgc                                                                                                                                                                                                      >  2:245709‑M1/165‑250 (MQ=255)
                                                  tgccgcctttcgcatttttagtcacaaatttccccgcgaccattgcatgcagacacatctcttcgtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGcgcg                                                                                                                                                                                                   <  1:331175‑M1/89‑1 (MQ=255)
                                                             gcatttttagtcacaaatttccccgcgaccattgcatgcagacacatctcttcgtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTc                                                                                                                                                                                          <  1:195424‑M1/98‑1 (MQ=255)
                                                             gcatttttagtcacaaatttccccgcgaccattgcatgcagacacatctcttcgtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTc                                                                                                                                                                                          <  1:312003‑M1/98‑1 (MQ=255)
                                                               aCTCCTATAAGGCGGCTTGATGCCGCCTTTCGCATTTTTAGTCACAAATTTCCCCGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggta                                                                                                                                                                                       >  1:234042‑M2/1‑182 (MQ=255)
                                                                 ttttagtcacaaatttccccgcgaccattgcatgcagacacatctcttcgtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCt                                                                                                                                                                                     >  2:130007‑M1/148‑250 (MQ=255)
                                                                    tataAGGCGGCTTGATGCCGCCTTTCGCATTTTTAGTCACAAATTTCCCCGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagc                                                                                                                                                                                 <  2:61144‑M2/251‑75 (MQ=255)
                                                                          gcggcTTGATGCCGCCTTTCGCATTTTTAGTCACAAATTTCCCCGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatg                                                                                                                                                                           >  1:420890‑M2/1‑171 (MQ=255)
                                                                           aaaatgccccgcgaccattgcatgcagacacatctcttcgtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAata                                                                                                                                                                          >  2:543041‑M1/138‑251 (MQ=255)
                                                                                 gATGCCGCCTTTCGCATTTTTAGTCACAAATTTCCCCGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttattcactggatatcgatggaaaagaaactgggactgagcgcactccccgcgctggtattaagctcaatgctgggcg                                                                                                                                                                    <  2:590127‑M2/251‑88 (MQ=255)
                                                                                 gATGCCGCCTTTCGCATTTTTAGTCACAAATTTCCCCGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggc                                                                                                                                                                     >  2:245709‑M2/1‑164 (MQ=255)
                                                                                 ccccgcgaccattgcatgcagacacatctcttcgtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctactatttattcttcttatcacgttttaatcactggatatcgatgggaaTATCACGTTTTACTCACTGGCTATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCACAATATggcgg                                                                                                                                                                    <  1:369382‑M1/120‑1 (MQ=255)
                                                                                   tGCCGCCTTTCGCATTTTTAGTCACAAATTTCCCCGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcg                                                                                                                                                                  <  1:331175‑M2/251‑90 (MQ=255)
                                                                                     gcgaccattgcatgcagacacatctcttcgtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGt                                                                                                                                                                <  1:103707‑M1/124‑1 (MQ=255)
                                                                                              gcatgcagacacatctcttcgtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGccc                                                                                                                                                       >  2:195424‑M1/119‑251 (MQ=255)
                                                                                              gCATTTTTAGTCACAAATTTCCCCGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttc                                                                                                                                                         <  1:195424‑M2/249‑99 (MQ=255)
                                                                                              gCATTTTTAGTCACAAATTTCCCCGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttc                                                                                                                                                         <  1:312003‑M2/249‑99 (MQ=255)
                                                                                                  ttttAGTCACAAATTTCCCCGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtct                                                                                                                                                    >  2:130007‑M2/1‑147 (MQ=255)
                                                                                                      acacatctcttcgtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCAc                                                                                                                                               <  1:617342‑M1/141‑1 (MQ=255)
                                                                                                       cacatctcttcgtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGACGTGTCCCGCCCGGCAGCacg                                                                                                                                              <  2:558611‑M1/142‑2 (MQ=255)
                                                                                                            aaaatgccccgcgaccATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaata                                                                                                                                         >  2:543041‑M2/7‑137 (MQ=255)
                                                                                                                  gtaaaatcccgcgcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCCGTTGCCAGCCCGGCCGCACTGCTCATCGGCt                                                                                                                                   <  1:292592‑M1/153‑1 (MQ=255)
                                                                                                                  ccccGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTACTATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGGAAtatcacgttttactcactggctatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcacaatatggcgg                                                                                                                                   <  1:369382‑M2/251‑121 (MQ=255)
                                                                                                                      gcgACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagt                                                                                                                               <  1:103707‑M2/251‑125 (MQ=255)
                                                                                                                             cgcttcagtggcaaactccctttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggcaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCCGTTGCCCGCCCGGCAGCACTGCTCATCCGCTGGGGGATTACt                                                                                                                        <  1:293164‑M1/164‑1 (MQ=255)
                                                                                                                              gcttcagtggcaaactccatttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCCACACTGCTCATCGgctggggtgtttctt                                                                                                                       <  2:463648‑M1/165‑8 (MQ=255)
                                                                                                                               gcatgcaGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagccc                                                                                                                      >  2:195424‑M2/1‑118 (MQ=255)
                                                                                                                                       acacATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagcccggcagcac                                                                                                              <  1:617342‑M2/251‑142 (MQ=255)
                                                                                                                                        cacaTCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggacgtgtcccgcccggcagcacg                                                                                                             <  2:558611‑M2/251‑143 (MQ=255)
                                                                                                                                                atttttatgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTAGTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGc                                                                                                     >  1:463648‑M1/69‑251 (MQ=255)
                                                                                                                                                   gTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggccgttgccagcccggccgcactgctcatcggct                                                                                                  <  1:292592‑M2/251‑154 (MQ=255)
                                                                                                                                                      atgcgttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCt                                                                                               >  1:61144‑M1/63‑251 (MQ=255)
                                                                                                                                                          gttttgccctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGc                                                                                           >  1:327105‑M1/59‑251 (MQ=255)
                                                                                                                                                              cgcTTCAGTGGCAAACTCCCTTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGCAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggccgttgcccgcccggcagcactgctcatccgctgggggattact                                                                                       <  1:293164‑M2/251‑165 (MQ=255)
                                                                                                                                                               gcTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagcccggccacactgctcatcggctggggtgtttctt                                                                                      <  2:463648‑M2/251‑166 (MQ=255)
                                                                                                                                                                  ctaatatttattcttcttatcacgttttaatcactggatatcgatggaaaTCTCACGTTTTAATCACTGGATATCGATGGAACAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGGATTTCTGGGGCTGGCATTTTATTGCTGGCCTTTGCcctgctgg                                                                                   <  1:455904‑M1/201‑2 (MQ=255)
                                                                                                                                                                     atatttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGGATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATcc                                                                                <  1:589511‑M1/204‑1 (MQ=255)
                                                                                                                                                                         ttattcttcttatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTTCTGGCCCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCAc                                                                            <  1:134061‑M1/208‑1 (MQ=255)
                                                                                                                                                                           attcttcttatcacgttttaatcactggatatcgatggcacTATCACGTTTTAATCACTGGATATAGATGGAAAAGAAACTGGGACTGAGCGAACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGGATTACTGGCGCTGGCCTTTTATTTCTGGCCTTTGCCATgctgctcctcccgc                                                                          <  2:695031‑M1/210‑5 (MQ=255)
                                                                                                                                                                                 aTTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtagtaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagcccggcagcactgctcatcggctggggtattactggcgctggcattttattgc                                                                    >  1:463648‑M2/1‑68 (MQ=255)
                                                                                                                                                                                   tatcacgttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCAtt                                                                     >  2:104309‑M1/34‑248 (MQ=255)
                                                                                                                                                                                       aTGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagcccggcagcactgctcatcggctggggtattactggcgctggcattttattgctggcct                                                              >  1:61144‑M2/1‑62 (MQ=255)
                                                                                                                                                                                         gttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTCCCGaa                                                            >  1:590127‑M1/28‑251 (MQ=255)
                                                                                                                                                                                         gttttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTCCCGaa                                                            >  1:334348‑M1/28‑251 (MQ=255)
                                                                                                                                                                                           tttaatcactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGGATTACTTGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGGTCCTCACGCGCATTCGTCCCGAACt                                                          <  1:572786‑M1/226‑1 (MQ=255)
                                                                                                                                                                                           gTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagcccggcagcactgctcatcggctggggtattactggcgctggcattttattgctggcctttgc                                                          >  1:327105‑M2/1‑58 (MQ=255)
                                                                                                                                                                                                 cactggatatcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTCCCGAACGTGAcg                                                     >  2:487621‑M1/20‑250 (MQ=255)
                                                                                                                                                                                                   cTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtctcacgttttaatcactggatatcgatggaacagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagcccggcagcactgctcatcggctgggggatttctggggctggcattttattgctggcctttgccctgctgg                                                  <  1:455904‑M2/251‑202 (MQ=255)
                                                                                                                                                                                                      atatTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagcccggcagcactgctcatcggctgggggattactggcgctggcattttattgctggcctttgccatgctgatcc                                               <  1:589511‑M2/251‑205 (MQ=255)
                                                                                                                                                                                                         atcgatggaaaTATCACGTTTTAATCACTGGATATCGATGGACAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCACTGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGGATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTCCCGAACTTGACGGCGGTATCt                                            <  1:281779‑M1/240‑1 (MQ=255)
                                                                                                                                                                                                          ttattCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagcccggcagcactgctcatcggctggggtatttctggccctggcattttattgctggcctttgccatgctgatcctcac                                           <  1:134061‑M2/251‑209 (MQ=255)
                                                                                                                                                                                                            attCTTCTTATCACGTTTTAATCACTGGATATCGATGGCACtatcacgttttaatcactggatatagatggaaaagaaactgggactgagcgaactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagcccggcagcactgctcatcggctgggggattactggcgctggccttttatttctggcctttgccatgctgctcctcccgc                                         <  2:695031‑M2/251‑211 (MQ=255)
                                                                                                                                                                                                              tggaaaTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTCCCGAACTTGACGGCGGGATCTTTAcc                                       <  1:189369‑M1/245‑1 (MQ=255)
                                                                                                                                                                                                                    tATCACGTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagcccggcagcactgctcatcggctggggtattactggcgctggcattttattgctggcctttgccatgctgatcctcacgcgcatt                                    >  2:104309‑M2/1‑33 (MQ=255)
                                                                                                                                                                                                                          gTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagcccggcagcactgctcatcggctggggtattactggcgctggcattttattgctggcctttgccatgctgatcctcacgcgcattcgtcccgaa                           >  1:590127‑M2/1‑27 (MQ=255)
                                                                                                                                                                                                                          gTTTTAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagcccggcagcactgctcatcggctggggtattactggcgctggcattttattgctggcctttgccatgctgatcctcacgcgcattcgtcccgaa                           >  1:334348‑M2/1‑27 (MQ=255)
                                                                                                                                                                                                                            tttAATCACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagcccggcagcactgctcatcggctgggggattacttgcgctggcattttattgctggcctttgccatgctggtcctcacgcgcattcgtcccgaact                         <  1:572786‑M2/251‑227 (MQ=255)
                                                                                                                                                                                                                                aTCACCGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCTGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCGTTGCCATGCTGATCCTCACGCGCATTCGTCCCGAACTTGACGGCGGTATCTTTACCTATGCCCTCGAAGGGttt                     <  2:281779/251‑1 (MQ=255)
                                                                                                                                                                                                                                  cACTGGATATCGATGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagcccggcagcactgctcatcggctggggtattactggcgctggcattttattgctggcctttgccatgctgatcctcacgcgcattcgtcccgaacgtgacg                    >  2:487621‑M2/1‑19 (MQ=255)
                                                                                                                                                                                                                                  cACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTTTTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTCCCGAACTTGACGGCGGTATCTTTACCTATGCCCCCGAAGGGTTTgg                   >  2:359318/1‑251 (MQ=255)
                                                                                                                                                                                                                                  cACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTCCCGAACTTGACGGCGGTATCTTTACCTATGCCCGCGAAGGGTTTgg                   <  2:134061/251‑1 (MQ=255)
                                                                                                                                                                                                                                   aCTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGGATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGTTCCTCACGCGCATTCTGCCCGCACTTGGCGGCGGTATCTTTACCTATGCCCGCGAAGGGTTTGGc                  >  2:289259/1‑251 (MQ=255)
                                                                                                                                                                                                                                      ggATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCCCTGCTCATCGGCTGGGGGATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTccc                                                               >  1:688338/1‑203 (MQ=255)
                                                                                                                                                                                                                                      ggATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTccc                                                               <  2:688338/203‑1 (MQ=255)
                                                                                                                                                                                                                                      ggATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTCCCGAACTTGACGGCGGTATCTTTACCTATGCCCGCGAAGGGTTTGGCGAg               <  2:704001/251‑1 (MQ=255)
                                                                                                                                                                                                                                         tatCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTCCCGAACTTGACGGCGGTATCTTTACCTATGCCCGCGAAGGGTTTGGCGAGCt             >  1:502446/1‑250 (MQ=255)
                                                                                                                                                                                                                                          atCGATGGAAAtatcacgttttaatcactggatatcgatggacaagaaactgggactgagcgcactcaccgcgctggtattaagctcactgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagcccggcagcactgctcatcggctgggggattactggcgctggcattttattgctggcctttgccatgctgatcctcacgcgcattcgtcccgaacttgacggcggtatct           <  1:281779‑M2/251‑241 (MQ=255)
                                                                                                                                                                                                                                               tGGAAAtatcacgttttaatcactggatatcgatggaaaagaaactgggactgagcgcactcaccgcgctggtattaagctcaatgctgggcgcgggtgttttcagtctgccgcaaaatatggcggcagttgccagcccggcagcactgctcatcggctggggtattactggcgctggcattttattgctggcctttgccatgctgatcctcacgcgcattcgtcccgaacttgacggcgggatctttacc      <  1:189369‑M2/251‑246 (MQ=255)
                                                                                                                                                                                                                                                  aaaaGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTCCCGAACTTGACGGCGGTATCTTTACCTATGCCCGCGAAGGGTTGGGCGAGCTAATCGGCttt   <  1:237164/251‑1 (MQ=255)
                                                                                                                                                                                                                                                   aaaGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCAGTTTATTGCTGGCCTTTGCCATGCTGATCCGCACGCGCATTCGTCCCGAACTTGACGGCGGTATCTTTACCTATGCCCGCGAAGGGTTTGGCGAGCTAATCGGCtttt  <  2:701275/251‑1 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                         
AGTGGCAGGAACGTGGTAATAACCTGACCGTCAGCGCAGATCTGTATAAATAACTATTCAGTTACTCCTATAAGGCGGCTTGATGCCGCCTTTCGCATTTTTAGTCACAAATTTCCCCGCGACCATTGCATGCAGACACATCTCTTCGTAAAATCCCGCGCTTCAGTGGCAAACTCCATTTTTATGCGTTTTGCCCTAATATTTATTCTTCTTATCACGTTTTAATCACTGGATATCGATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTCCCGAACTTGACGGCGGTATCTTTACCTATGCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTT  >  NC_000913/1679319‑1679812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.