Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	2,993,231	IS5 (–) +4 bp	coding (1138‑1141/1377 nt)	ygeH →	putative transcriptional regulator YgeH

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2288919 =	NA (NA)	41 (0.570)	38/492	0.7	100%	noncoding (1195/1195 nt)	IS5	repeat region
	?	NC_000913	= 2993234	0 (0.000)					coding (1141/1377 nt)	ygeH	putative transcriptional regulator YgeH
*	?	NC_000913	2993231 =	0 (0.000)	66 (0.910)	63/492	0.2	100%	coding (1138/1377 nt)	ygeH	putative transcriptional regulator YgeH
	?	NC_000913	3130146 =	NA (NA)					noncoding (1/1195 nt)	IS5	repeat region

AAAAATTTATCGCATACAAATTCTCGTCAGCTGCTTTAATTTCAAAATGTTGTCAATTATAACTCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2993476‑2993231 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAAC  >  NC_000913/3130146‑3130389                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAAAATTTATCGCATACAAATTCTCGTCAGCTGCTTTAATTTCAAAATGTTGTCAATTATAACTCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAA                                                                                                                                                                                                                                                  <  2:235508/250‑1  AAAATTTATCGCATACAAATTCTCGTCAGCTGCTTTAATTTCAAAATGTTGTCAATTATAACTCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGG                                                                                                                                                                                                                                                >  2:593592/1‑251              ATACAAATTCTCGTCAGCTGCTTTAATTTCAACATGTTGTCAATTATAACTCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTC                                                                                                                                                                                                                                    >  1:286749/1‑251                         CGTCAGCTGCTTTAATTTCAAAATGTTGTCAATTATAACTCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATG                                                                                                                                                                                                                           >  1:389430/1‑249                                TGCTTTAATTTCAAAATGTTGTCAATTATAACTCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGT                                                                                                                                                                                                                  >  2:632982/1‑251                                    TTAATTTCAAAATGTTGTCAATTATAACTCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGT                                                                                                                                                                                                              >  1:535467/1‑251                                     TAATTTCAAAATGTTGTCAATTATAACTCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGT                                                                                                                                                                                                              <  2:681836/250‑1                                       ATTTCAAAATGTTGTCAATTATAACTCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATAGCTACTCATTCTTTTATCACAACTGCTTTTCGTCTTCTGTGTTCGAGGTGTATTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGTAAGGTGCGAACAAGTCCCTGATATGAGATCATGGTTGTCAT                                                                                                                                                                                                           <  2:730979/251‑1                                          TCAAAATGTTGTCAATTATAACTCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCT                                                                                                                                                                                                         <  1:414503/250‑1                                               ATGTTGTCAATTATAACTCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCACTTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTT                                                                                                                                                                                                                >  2:31674/1‑238                                               ATGTTGTCAATTATAACTCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTT                                                                                                                                                                                                                <  1:31674/238‑1                                                TGTTGTCAATTATAACCCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCC                                                                                                                                                                                                   >  1:16017/1‑250                                                       AATTATAACTCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAAC                                                                                                                                                                                            >  2:51900/1‑250                                                          TATAACTCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGG                                                                                                                                                                                        >  2:607220/1‑251                                                            TAACTCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTT                                                                                                                                                                                      >  1:698806/1‑251                                                                 CGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGGCATCTGGAGCCATAGAACAGGGTTCATCA                                                                                                                                                                                 <  2:334719/251‑1                                                                      GCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGT                                                                                                                                                                            <  1:51900/251‑1                                                                             CTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTCTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAAC                                                                                                                                                                     >  2:641479/1‑251                                                                              TCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATC                                                                                                                                                                        >  2:556231/1‑247                                                                              TCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGGTCATCATGAGTCATC                                                                                                                                                                        <  1:556231/247‑1                                                                                   GTTTCTTTATAGTAGAGGTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCT                                                                                                                                                               >  2:537243/1‑251                                                                                           ATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAC                                                                                                                                                       >  1:415678/1‑251                                                                                            TAGTAGCGTTTAATGTTGTTTTTGAGCGGGTTAGTCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGAC                                                                                                                                                       >  2:481741/1‑250                                                                                              GTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGCTTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGT                                                                                                                                                    >  2:273737/1‑251                                                                                                AGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG                                                                                                                                                   >  2:601799/1‑250                                                                                                                   GAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGT                                                                                                                               >  1:153012/1‑251                                                                                                                   GAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCG                                                                                                                                <  1:230916/250‑1                                                                                                                     GCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCA                                                                                                                             <  1:260299/251‑1                                                                                                                         GTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACC                                                                                                                         <  1:554858/251‑1                                                                                                                                        ATCTACTCATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTT                                                                                                           <  2:698806/250‑1                                                                                                                                        ATCTACACATTCTTTTATCACCACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTC                                                                                                          >  2:126688/1‑251                                                                                                                                         TCTACACATTATTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAACGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCT                                                                                                         >  2:281731/1‑251                                                                                                                                          CTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGA                                                                                                                      >  1:6992/1‑237                                                                                                                                          CTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATGATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGA                                                                                                                      <  2:6992/237‑1                                                                                                                                            ACACATTCTTTTATCACAGCTGATTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAA                                                                                                                    >  1:237359/1‑237                                                                                                                                            ACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTG                                                                                                       <  1:732793/250‑1                                                                                                                                            ACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTGTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTTATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAA                                                                                                                    <  2:237359/237‑1                                                                                                                                               CATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCC                                                                                                   >  1:12539/1‑251                                                                                                                                                  TCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGC                                                                                                 >  1:583142/1‑250                                                                                                                                                        ATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAG                                                                                           <  1:593592/250‑1                                                                                                                                                           ACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGA                                                                                       <  2:286749/251‑1                                                                                                                                                             AACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGTGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATT                                                                                     >  2:395089/1‑251                                                                                                                                                              ACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTC                                                                                    <  1:601799/251‑1                                                                                                                                                              ACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTC                                                                                    <  2:535467/251‑1                                                                                                                                                                 GCTTTTCGTCGTCTGGGTTCGAGGTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGC                                                                                 <  2:415678/251‑1                                                                                                                                                                    TTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCA                                                                               >  1:708909/1‑250                                                                                                                                                                    TTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCA                                                                               <  2:708909/250‑1                                                                                                                                                                          CTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAA                                                                         >  1:684552/1‑250                                                                                                                                                                                         TGTAGCGATTTGTCTCTACACATCCTTGCCTCTTCAATTTTTTCATTATGCACGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGCTCATGTTTGTAATCTGGAGCCATAGAACAGGGTTCATCATGCGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCCGACAAGAGATTTTCTTGTCCCGCATGGCGCAGATTCTGCCATGGCAAAACATGGTGGAAGTC                                                          >  2:680428/1‑250                                                                                                                                                                                                ATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCAGTATGAAAGTGGACTAGGGAAGTTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATCGTGGAAGTCATCGAGCC                                                  <  2:525052/251‑1                                                                                                                                                                                                  TTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTGGTCATCTGGAGGCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGGCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCG                                                 <  1:481741/250‑1                                                                                                                                                                                                            AAATCCTTGCCTCTTCAATTTTTTCCTTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCA                                       >  2:35353/1‑250                                                                                                                                                                                                                   TGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGT                               >  1:546169/1‑251                                                                                                                                                                                                                   TGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCGGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTG                                 <  2:12539/249‑1                                                                                                                                                                                                                      CTCTTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCACGGCTGGTAAT                            >  2:230849/1‑251                                                                                                                                                                                                                         TTCAATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGC                         >  1:408905/1‑251                                                                                                                                                                                                                             ATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGC                     >  1:390308/1‑251                                                                                                                                                                                                                             ATTTTTTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGC                     >  2:394502/1‑251                                                                                                                                                                                                                                  TTCATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCT                >  1:336075/1‑251                                                                                                                                                                                                                                    CATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTt              >  2:611489/1‑250                                                                                                                                                                                                                                     ATTATGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTAT             >  1:616024/1‑251                                                                                                                                                                                                                                         TGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGC         >  2:202603/1‑251                                                                                                                                                                                                                                         TGAAAGTGGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGC         >  1:659912/1‑251                                                                                                                                                                                                                                                GGACTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGCGCATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAAC  >  1:688653/1‑251                                                                                                                                                                                                                                                    TAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTC                                                                                                     <  1:263312/148‑1                                                                                                                                                                                                                                                    TAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTC                                                                                                     >  2:263312/1‑148                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAAAATTTATCGCATACAAATTCTCGTCAGCTGCTTTAATTTCAAAATGTTGTCAATTATAACTCGATGGCTTTCACTCTCAGTTTCTTTATAGTAGAGTTTAATGTTGTTTTTGAGCGGGTTAGGCACATACATATCTACACATTCTTTTATCACAACTGCTTTTCGTCTTCTGGGTTCGAGTTGTAGTGATTTGTCTATACAAATCCTTGCCTCTTCAATTTTTTCATTATGAAAGTGGACTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2993476‑2993231 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAAC  >  NC_000913/3130146‑3130389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.