Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	2,378,926	IS5 (–) +4 bp	coding (331‑334/1671 nt)	menD ←	2‑succinyl‑5‑enolpyruvyl‑6‑hydroxy‑3‑ cyclohexene‑1‑carboxylate synthase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2288919 =	NA (NA)	64 (0.880)	63/492	0.2	100%	noncoding (1195/1195 nt)	IS5	repeat region
	?	NC_000913	= 2378929	0 (0.000)					coding (331/1671 nt)	menD	2‑succinyl‑5‑enolpyruvyl‑6‑hydroxy‑3‑ cyclohexene‑1‑carboxylate synthase
*	?	NC_000913	= 2290113	NA (NA)	40 (0.550)	37/492	0.7	100%	noncoding (1/1195 nt)	IS5	repeat region
	?	NC_000913	2378926 =	0 (0.000)					coding (334/1671 nt)	menD	2‑succinyl‑5‑enolpyruvyl‑6‑hydroxy‑3‑ cyclohexene‑1‑carboxylate synthase

CCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2289874‑2290113 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTT‑GCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGC  >  NC_000913/2378926‑2379164                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGC                                                                                                                                                                                                                                       <  1:397052/251‑1  CAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGCATCTGCTCCATCCGGGACAAGGAAATCTATTTTCTGGTCTGCCGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGCTCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCG                                                                                                                                                                                                                                      >  1:710207/1‑251     CGGATAAGGTCGCCGGCCATTACCAGCCTTTGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGC                                                                                                                                                                                                                                   <  2:66471/251‑1     CGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGC                                                                                                                                                                                                                                   >  2:504324/1‑251      GGATACGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGATCCAGATGACAAAAATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCG                                                                                                                                                                                                                                  >  2:441348/1‑251          AAGGTCGCCGGCCATTACCAGCCTTGGTGTAAAACGGCGCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATACGGGACAATAAAATCTCTGTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAATGTAAGTTGATGACTCATGAGGAACCCTGTTCTATGGCGCCAGATGACAAACATGATCACATATCAGGGACTTGTTCGCACCTGCCGTAGCTGCGGCGGGCGATC                                                                                                                                                                                                                               <  2:710207/250‑1          AAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATC                                                                                                                                                                                                                               <  1:88103/250‑1             GTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCG                                                                                                                                                                                                                           >  1:187783/1‑251                   GGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAG                                                                                                                                                                                                                     <  1:394075/251‑1                    GCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGA                                                                                                                                                                                                                    <  1:654711/251‑1                             AGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTT                                                                                                                                                                                                           <  2:640673/251‑1                                          AACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGGTAAGGGAATTAGGTTTTCTCCGGTTt                                                                                                                                                                                               >  1:410469/1‑249                                                   ATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTC                                                                                                                                                                                     <  2:301457/251‑1                                                   ATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTC                                                                                                                                                                                     <  1:642411/251‑1                                                         TCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCA                                                                                                                                                                                <  2:210114/250‑1                                                         TCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGGCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCA                                                                                                                                                                                <  2:434120/250‑1                                                          CCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGT                                                                                                                                                                              <  1:504402/251‑1                                                                 GTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGAT                                                                                                                                                                       <  1:49220/251‑1                                                                        CATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGACGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTTTCCCGTTAACCCGGCTTCCATCAGTGACGGAGAGAGATT                                                                                                                                                                >  1:694586/1‑251                                                                         ATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTT                                                                                                                                                               <  2:111682/251‑1                                                                          TGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTCAGGGGAACAGGTTTTCTGCCGTTTACCCGGCTTCAATAAATGCCGGCTAGAAATTTt                                                                                                                                                              >  1:721323/1‑250                                                                                   CTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTTAGAGAATCAGTTTTTCTTCGGTTAACCCGGCTTCAATCAGTGCCGGGTAAGGATTT‑TCCACCcccc                                                                                                                                                    >  2:171269/1‑247                                                                                     GCTCCATGCGGAACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTT‑GCCACCGCCG                                                                                                                                                    <  2:461277/249‑1                                                                                          ATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGGTTTTCTCCGGTTAACCCGGCCTCAATCAATGCCGGATAGAGAATT‑GCCCCCGCCCTGCCGGg                                                                                                                                             >  1:329261/1‑250                                                                                           TGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTTAGAGAATCCGTTTTTTTTCCGTTTACCCGGGCTCAATCCGTGCCGGGTAGAGATTT‑TTCACCCCCGCGCCGG                                                                                                                                              >  2:271337/1‑249                                                                                                        AATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATTAGTTTTTTTCCGGTTAACCCCGCTTCCATCAGTGCCGGATAGAGGTTT‑TCCACCCCCGTGCCGGAGGGCACAATCACCc                                                                                                                               >  1:176591/1‑250                                                                                                                 TCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGATTTTTTTCGGTTAACCCGGCTTCAATAAGTGCCGGGTAGCGATTTTGCCAC‑GCCGTGCCGGCGGGCCCAATCACCCCCACCcgcc                                                                                                                      >  1:42461/1‑247                                                                                                                  CTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATA                                                                                                                                                                      <  1:668115/203‑1                                                                                                                        TGACGGCGCTTACTGCTGCATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGGTTTTCTCCGGTTAACCCGGCTTCCATCAGTGCCGGATAGAGGTTTttcacccccctgc                                                                                                                                                  >  1:191217/1‑204                                                                                                                        TGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTT‑GCCACCGCCGTGC                                                                                                                                                 <  2:191217/217‑1                                                                                                                                              ccctggcggaGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGCTGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTGCCTGAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTTTCCGGTTAACCAGGCTTCAACCAGTGCCGGATAGAGATTT‑GCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCC                                                                                         <  2:757/241‑1                                                                                                                                                           GGTAATTTGATGACTCATGATGAACCCTGTTCTATGGCACCAGATGACAAACAGGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCGGGCGGGCGATCGGCGGTTAGGAGAAGCAGTTTTTCCCCGGTTACCCCGGCTTCAACCAGTGCCGGATAGAGATTG‑GCCACCGCCGTGCCGGAGGTCACAAGCACCGCCACCGGCTGCTTGCTGACTTGCGCCAGCCCCAGCGCCAGATGCCCCAACC                                                                            <  2:350087/251‑1                                                                                                                                                             TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAAACCGGCTTCAATCAGTGCCCGATAGAGATTT‑GCCACCGCCCTGCCCGGGGTCACCATCACCGCCACCGGCTGCTTTCTGCCTTTTGCCCCCCCCAGCGCCCGATGCCCCCACCCc                                                                          >  1:97480/1‑250                                                                                                                                                              AAGTTGAGGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGTTCTCATATCAGGGACTTGTTCGCCCCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTT‑GCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCAC                                                                         <  2:187783/251‑1                                                                                                                                                                             GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGATTTTCTCCGGGTAACCCGGCCTCAATCAGTGCCGGATAGAGATTT‑TCCACCGCCGGGCCGGAGGTCACAATCACCGCCAACGGCTGCTTGCTGACTTTTGCCAGCCCCCGCGCCACATGCCCCAACCCACGCTCATCGCAATGGG                                                          >  1:577093/1‑251                                                                                                                                                                                                                      CATAGCAGGGATTGGTTCGCACCTTCTTTAGCTCGGGCGGGCGACCGGCGGTTAAGAGAATCAGTTTTCTTCCGGTTAACCCTGCTCCAATCAGTGCGGGATAGAGATTT‑GCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGT                  <  1:632124/250‑1                                                                                                                                                                                                                        TATCAGGGACTTGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTT‑GCCACCGCCGTGCCGGGGGGCACCATCACCGCCACCCGCTGCTTGCTGACTTTCGCCCGCCCCAGCGCCAGATGCCCCAAACCCCGCTCATCGAAATGGGTGTGGGGAATGAATTCGGAATTTTCCGCCGCCGCCAACGTTA                >  1:194765/1‑250                                                                                                                                                                                                                             GGGACTGGTCCGCCCCTTTCTTAGCCCCGGCGGGCGATCGGCGGTAAAGAGAAACATTTTTTCCCGGGTTACCCCGGCTTCAATCAGTGCCGGAGAGAGTTTT‑GCCCCCGCCGTGCCGGAGGTCACAATCACCGCCCCCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCATATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTG          <  2:509255/251‑1                                                                                                                                                                                                                                   TGTTCGCACCTTCCTTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTT‑GCCACCGCCGTGCCGGAGGTCACAA                                                                                                                                     <  1:608284/122‑1                                                                                                                                                                                                                                      TCGCCCCTTCCTTAGCCCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTT‑GCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGC  <  1:690794/250‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2289874‑2290113 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGCTCCGGCGGGCGATCGGCGGTTAAGAGAATCAGTTTTTCTCCGGTTAACCCGGCTTCAATCAGTGCCGGATAGAGATTT‑GCCACCGCCGTGCCGGAGGTCACAATCACCGCCACCGGCTGCTTGCTGACTTTCGCCAGCCCCAGCGCCAGATGCCCCAACCCACGCTCATCGAAATGGGTGTGGTGAATGAATGCGGAATTCTCCGCCGCCGCTAACGTTAACGGTGTAGAACGC  >  NC_000913/2378926‑2379164

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.