| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,173,363 | Δ2 bp | intergenic (‑490/+918) | gatD ← / ← gatB | galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,173,363 | 0 | C | . | 80.3% | 192.5 / 47.5 | 66 | intergenic (‑490/+919) | gatD/gatB | galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component |
| Reads supporting (aligned to +/- strand): ref base C (1/12); new base . (36/17); total (37/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.72e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.84e-01 | |||||||||||
| * | NC_000913 | 2,173,364 | 0 | C | . | 80.3% | 192.9 / 47.1 | 66 | intergenic (‑491/+918) | gatD/gatB | galactitol‑1‑phosphate 5‑dehydrogenase/galactitol‑specific PTS enzyme IIB component |
| Reads supporting (aligned to +/- strand): ref base C (1/12); new base . (36/17); total (37/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.72e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGACAGGCTC > NC_000913/2173127‑2173612 || gaGCCGCCAGTTGGGTTTGCAAACCAATAGTTTGCGTGGCTATCCACAGGGGGATGCTCATAATGATGACCCCCGAGATTAAGGTGCGGAACAGATTTCCACGA‑TGCCCGGCGCCCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGACCGACAACCGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCcag < 2:643340/249‑1 (MQ=255) gccgccAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCcagc > 2:493241/1‑249 (MQ=255) cgccAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGAAACCACC‑‑GCCGTATGTCCCagcagc > 2:12369/1‑250 (MQ=255) ggTGTGCAAACCAATAGTTTGCGTGGCTATCCACAGGGTAATGCTAATAAGTATACCACCCGAGATAAAGGTGCGGAACAGATTCCCACGA‑GGCCCGGCGACCGCCACCGCCACGAAGAAGCCAATGGGGGCAAGATCGCCAAACGGCAGCCCCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGAAAAAAAT‑CAGTCTGGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGAt < 2:137932/251‑1 (MQ=255) aaTAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATc > 1:191305/1‑250 (MQ=255) aTAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCACGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATc > 1:571034/1‑249 (MQ=255) gTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGa > 2:550205/1‑250 (MQ=255) gTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTg > 2:636778/1‑251 (MQ=255) gggATCCACAGGGTGATGCTTATAATGATGACACCCGAGAGTAAGGTGCGGAACAGATTTCCCCGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGAcc < 1:11078/249‑1 (MQ=255) cgATCCACAGGGGGATTCCCATAATTAGGCCACCCAAAATAAAGGTGCGGAACAGATTCCCACGA‑GGCCCGGCGACCGCCATCGCCAGGAAGAAGCCGATGGGGGCAAGATCGCCAAACGGCAGCACCTGATTCCCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAC‑CAGGCTGGCCGATAC‑‑CTCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGAccg < 2:702399/251‑1 (MQ=255) acaGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAAc > 1:9852/1‑251 (MQ=255) gggTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTc > 2:721768/1‑251 (MQ=255) gggTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTc > 1:201851/1‑251 (MQ=255) gATGCCCATAATACTGACACCCGAGATTAAGGTACGGAACACATTTCCACGA‑TGAACGTCGACCGCCATCGCCACGAAGAAGCCGCTGGTGGCAAGATCGCCAACCGGCAGCACATGATTACCCGGCACACAAACAGCAATTAAAA‑TGGAGAGTGGGATAAAAAT‑CAGACTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGACGGATCAAGGCCAATCAAGAACTCCTGACAGCCGCACTTCGCCt > 2:695548/1‑251 (MQ=255) caaaatgataccacCCGAGATTAAGGTGCGAAACAGATTCCCACGA‑GGCACGCCGCCCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGACCGCAAAACGGCAGCACCTGATTACCCGGCAAACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTGGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAAc < 2:8596/240‑1 (MQ=255) aaTGCTGACCCCCGATAGTAAGGTGCGGAACAGATT‑CCCCGAGTCCCCGGCGCCCGCCATCCCCACGAAAAAGCCGATGGGGGCAAAAGCGCCAAACGGCGGCACCTGGTTACCCGCCACACAAGCAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGCGTTGCGGAT‑CC‑CCCCGCCGTATGTCCCAGCAGCAGCGCCGGATCAAGGCCAAGCAGAAACGCCTGTTCGCCGAACTTCGCCTGTAAACGAc < 2:351548/251‑1 (MQ=255) atgatgACACCCGAGATTAAGGTGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAACCAGCAATTAAAC‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACt > 2:536901/1‑251 (MQ=255) tgatgaCACCCGAGATTAAGGTGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACt > 2:375996/1‑250 (MQ=255) aggaCACCCGAGATTAAGGTGCGGAACAGTTTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTAc < 1:376105/248‑1 (MQ=255) ggaCACCCGAGATTAAGGGGCGAACCAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑GGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGa < 1:12369/250‑1 (MQ=255) cccGATATTAGGGTGCGGACAAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCCCGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGAAGCACCTGATTCCCCGGCACTCAAACAGCAATTAAAA‑TGGTGAGGGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGcttg < 1:498619/251‑4 (MQ=255) aTTAAGGTGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGc > 2:632498/1‑251 (MQ=255) tAAGGTGCGGAACAGCTTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCCACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGACCTTCGCCTGTAAACGACTACGAGCTTGCTTAGCg > 2:606873/1‑250 (MQ=255) aaaGGTGCGGAACAGATTCCCACGA‑TGCCCGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGAACGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATAAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCg < 2:9852/249‑1 (MQ=255) aaGGTGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGAt > 1:22257/1‑251 (MQ=255) aGGTGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATg > 2:614237/1‑251 (MQ=255) tGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGc > 1:234555/1‑251 (MQ=255) cGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGt > 1:417986/1‑251 (MQ=255) ttCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAAccatcc > 2:479340/1‑251 (MQ=255) accACGA‑GGCACGGCGACCGCCACCGCCACGAAGAAGCCGATGTGGGCAAGACCGCCAAACGGCAGCACCTAATTACCCGGCACACAACCGGCAATTAAAA‑TGGGGAGTGGGATAAAAAT‑CAGGCTTGCCGATAC‑‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAAccatcc < 2:507983/249‑1 (MQ=255) ccACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAAccatccat > 2:718122/1‑251 (MQ=255) gA‑TGCCCGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACACACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTCAACCATCCatgatg > 2:696865/1‑251 (MQ=255) tGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATggg > 1:508362/1‑251 (MQ=255) gCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGt > 2:231481/1‑251 (MQ=255) aCGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGCACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGttt > 2:196613/1‑251 (MQ=255) gACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGCTGGGTTTAATc > 1:465846/1‑250 (MQ=255) cccATCGCCACGAAGAAGCCGATGGGGGAAAGAGCGCAAAACGGCAGCACCTAATTACCCGGCACACAAACAGAAATTAAAA‑TGGTGAGTGGGAAAAAAAT‑CAGGTTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCg < 2:191305/250‑1 (MQ=255) gCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCAt > 2:39267/1‑251 (MQ=255) ccACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCAtt > 2:242923/1‑251 (MQ=255) agaagCCGATGGTGGCAAGATCGCCAACCGGCAGCCCCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGTCTTGCCGATCCCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTagcagc < 1:684704/251‑1 (MQ=255) gagggtggAAAGATCGCCAAACGGCAGCACCTAATTACCCGGCACACAAACAGAAATTAAAA‑TGGTGGGGGGGAAAAAAAT‑CAGGCTTGCCGATAC‑‑CGCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTATCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTg < 2:730370/248‑1 (MQ=255) gggCAAGACCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATCCCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTgccgcc < 1:93937/250‑1 (MQ=255) ccgcaaaagggCAGCACCTGATTCCCCGGCACACAAACAGAAATAAAAA‑GGGGGAGGGGGA‑AAAAATGCAGGCTTGCGGATAC‑‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTAc < 2:593795/242‑1 (MQ=255) gCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCg > 1:89658/1‑251 (MQ=255) aaCGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑GGGTGAGTGGGATAAAAAT‑CAGGCTGGCCGATCCCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAAGCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAg < 1:339213/251‑1 (MQ=255) agcccaggATTCCCCGGCACACAACCAGCAATTAAAA‑TGGTGATGGGGATAAAAAC‑CAGGCTTGCCGAAAC‑‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATTGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCaa < 1:606873/244‑1 (MQ=255) agcaccgaattccccGGCACACAAACGGAAATAAAAA‑GGGTGAGGGGGAAAAAAAT‑CAGGCTGGCCAATCCCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCaa < 2:359875/239‑1 (MQ=255) cctgataccccGGCACCCAAACA‑TAATTAAAAAGGGTGAGGGTGATAAAAAC‑CAGGCTGGCC‑A‑ACCCCACCTCCTTATGTCCCAGCAGCACCGCCGTATCAAGGCCAATCAGGAACGCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGTTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATaca < 2:417986/243‑1 (MQ=255) gATTCCCCGGCACAAAAACAGCAATTAAAA‑GGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATCCCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACAcc < 1:493241/250‑1 (MQ=255) aaTTACCCGGCACACAAACAGCAATAAAAA‑TGGGGAGTGGTATAAAAAC‑CAGGTTTCCCGAT‑CC‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGACCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCt < 2:201851/250‑1 (MQ=255) tACCCGGCACACAAACAGCAATAAAAA‑GGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACGCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCttt < 1:721768/250‑1 (MQ=255) accccGGCACAAAAAAAGCAATAAAAA‑TGGTGAGTGGGAAAAAAAT‑CAGCCTGTCCGAT‑CC‑CCCCGCCGTATGCCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTg < 2:22257/249‑1 (MQ=255) cccGGCACACAAACAGCAATTAAAA‑GGGTGAGTGGGATAAAAAC‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGAc < 1:39267/251‑1 (MQ=255) ggccccaaaaacacaaataaaaa‑GGGTGAGGGGGAAAAAAAT‑CAGGCTTCCCGA‑ACC‑CCCCGCCGTATGTCCCGGCAGCAACGCCGGATCAAGGCCAAGCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACAt < 2:235068/232‑1 (MQ=255) cacaAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATA‑‑ACACCGCCGTATGTCCCAGCAGCAACGCCGGATCACGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCTTCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTa > 1:317873/1‑250 (MQ=255) cAGCAATTAAAA‑GGGTGAGTGGGATAAAAAT‑CGGGCTTGCCTAT‑CC‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCGGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCcgcg < 2:71678/251‑1 (MQ=255) aaTTAAAA‑GGGTGAGGGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGa < 1:550205/251‑1 (MQ=255) aaaaggggaggaggaaaaaaaaT‑CAGGTTGGCCGAT‑CC‑CCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGcc < 2:508362/234‑1 (MQ=255) aaa‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGAATGTCCCAGCAGCAACGCCGGATCAAGGCCCATCAGGAACTCCTGACCGCCACACTCCGCATGTAAACGACTACGAGCTTGCTTAGCGCTGGGCGTTAACCCATCCATGATGGGTTTAATCACCCGAGGCATTAGCAGCATCACTGCCGCAGTTTTTACCGCAAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGACGCCg > 1:700033/1‑251 (MQ=255) ggTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGATTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATa > 1:623198/1‑250 (MQ=255) gTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAAt > 1:319418/1‑251 (MQ=255) gAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATc > 2:619092/1‑250 (MQ=255) gTGGGATAAAAAT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGc > 2:50959/1‑251 (MQ=255) aaaaaT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCAGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAACCGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGCTAATCAGCCCCATc > 2:639837/1‑250 (MQ=255) aaT‑CAGGCTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGCACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATcaca > 2:658576/1‑250 (MQ=255) cTTGCCGATACCACC‑‑GCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAg > 1:117962/1‑233 (MQ=255) cgatacccccGCCGGATGTCCAAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCTCTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTCGACATCGTAACCCGCGAGGAAGCCGATAATCAGCCCCATCACAAAACCCACGGTGa < 1:196613/245‑1 (MQ=255) cccaccgccgTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGACAg < 1:375996/246‑1 (MQ=255) accaccgccgTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGAGAATCAGCCCCATCACAAAACCCACGGTGACAg < 1:231481/246‑1 (MQ=255) cccGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCTTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGACAGGCTc < 1:614237/251‑1 (MQ=255) || TAGCCGCCAGTTGGGTGTGCAAACCAATAGTTTGCGTCGCGATCCACAGGGTGATGCTCATAATGATGACACCCGAGATTAAGGTGCGGAACAGATTTCCACGA‑TGCACGGCGACCGCCATCGCCACGAAGAAGCCGATGGTGGCAAGATCGCCAAACGGCAGCACCTGATTACCCGGCACACAAACAGCAATTAAAA‑TGGTGAGTGGGATAAAAAT‑CAGGCTTGCCGATACCACCCCGCCGTATGTCCCAGCAGCAACGCCGGATCAAGGCCAATCAGGAACTCCTGACCGCCGAACTTCGCCTGTAAACGACTACGAGCCTGCTTAGCGATGGGCGTTAAACCATCCATGATGGGTTTAATCACCCGTGGCATTAGCAGCATCACTGCCGCCGTTTTTACCGCCAGCTGCAATACACCTTTGACATCGTAACCCGCGAGGATGCCGATAATCAGCCCCATCACAAAACCCACGGTGACAGGCTC > NC_000913/2173127‑2173612 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |