Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,040,126	G→T	L277L (CTG→CTT)	appB →	cytochrome bd‑II subunit 2

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,040,126	0	G	T	92.1%	109.9 / ‑5.7	38	L277L (CTG→CTT)	appB	cytochrome bd‑II subunit 2
Reads supporting (aligned to +/- strand):  ref base G (1/2);  new base T (17/18);  total (18/20)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01

GCTGGCGACCAAACGCGCTGCACTGTTGGTGATGCTGTGCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGTATTGATGGCTTTGTACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTGACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGCCCATTGTGTTGCTCTACACTCTCTGGAGCT  >  NC_000913/1039898‑1040367                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                  gCTGGCGACCAAACGCGCTGCACTGTTGGTGATGCTGTGCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGTATTGGTGGCTTTGTACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAAAGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTTTCGTg                                                                                                                                                                                                                             >  1:128510/1‑251 (MQ=255)  cTGGCGAACAAAAGCGCTGCACTGTTGGTGAAGCTGTGCTTTTTGCTGGCGGGTGACTGGCTGGGGGGAGGTATTGATGGCTTTGTACTGGTCGCCCAGGGTGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACATGGGGCCTGGGTGAATAATTTTGTCGAGTCGCCCGTTTTGTGGGACTTCCCGCTGCTGGGATTCTTCTGACCATTGCTTACGGAGATGGCGGTTTGTCGTgg                                                                                                                                                                                                                            >  1:98023/1‑251 (MQ=255)    ggCGACCAAACGCGCTGCACTGTTGGTGATGCTGTGCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGTATTGATGGCTTTGTACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGt                                                                                                                                                                                                                           <  1:217249/250‑1 (MQ=255)       gACCAAACGCGCTGCACTGTTGGTGATGCTGTGCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGTATTGCAAGCTTTGTACTGCTCGCCAAGGATGCGAACGGTCCATCCACTCCGTTGATTGAACTGGGGGCAGTGCTACCTGGTGCCTGGGTGAATAATTTTGTGGAGTCGCCCGTTTTGTGGGTCTTCCCACTGCTGGGATTCTTCTGCCCCTTGTTTACCGTGATGGCGATTTAACGTGGTCGcc                                                                                                                                                                                                                       >  1:402103/1‑251 (MQ=255)          cAAACGCGCTGCACTGTTGGTGATGCTGTGCTTTTTGCTGGCGGGTTACTGGATGTGGGTCGGGATTGATGGCTTTGTACTGCTCGCCCCGGATGCTAACGGTCCTTCCAAACCGTTTATGAAACTGGGGGCAGTGGTACCTGGTGCCTGGCTGGATAATTTTGTCGAGTTGCCCGGTTTGTGGATCTTCCCCCTGATGGGATTCTTCTTCCCACTGCTTACGGTGATGGCGGTTTATTGTGGTCGCCCgg                                                                                                                                                                                                                    >  2:330690/1‑251 (MQ=255)               gcgcTGCACTGTTGGTGATGCTGGGCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGTATTGATGGCTTTGTTCTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTGACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTgg                                                                                                                                                                                                               <  2:314913/251‑1 (MQ=255)                 gctgcccttgtGGTTATGCTGTGCTTTTTGCTGTCGGGTTACTGGGTGTGGGTCGGTAGTGATGGCTTTGTACTGCTCGCGCAGGATGCTAACGGTCCTTCCAATTCGTTAATGAAACTGTTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGGGTCGCCCTTTTTGTGGATCCTCCCGCGTCTGGGATTCTTCTGTCCATGGCTTACGGTGAAGGCGATTTATCGGGGTCGCCTGGGTTggtg                                                                                                                                                                                                             <  2:259242/241‑3 (MQ=255)                       cTGTTGGTGATGCTGTGCTTTTTGCTGGCGGGTTACTGGCTGTGGGTTGGTATTGATGGGTTTTTTCTGCTCGCCCAGGGTGCTAACGGGCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGGCCGTTTTGTGGATCTTCCCGCCGCTGGGATTCTTCTGCCCCTTGCTTAAGGTGATGGCGATTTTTCGTGGTCGCCCGGGGTGGGGGttttt                                                                                                                                                                                                       >  2:22174/1‑251 (MQ=255)                          ttGGTGATGCTGTGCTTTTTGATGGCGGGGTACTGGCTGTGGGTCGGTATTGATGGCTTTGTCCTTCTCGCCCAGGGTGCTAACGGGCCTTCCAATCCGTTAATGAAACTGGTGGCAGCGCTACCTGGTGCCTGGATGAATAATTTTGTCGCGTCGCCCGTTTTGTGGGTCTTCCCGCGGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGCTTTATCGTGGTTGCCCGGGGTGGGGGTTTTTGAt                                                                                                                                                                                                    >  2:263762/1‑251 (MQ=255)                                  gCTGTGCTTGTTGCTGGCGGGTTACTGGCTGTGGGTCTGTATTGATGGCTTTGTACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCTGTTTTGTTGATCTTCCCGGTGCTGGGATTCTTCGGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGcatca                                                                                                                                                                                             <  1:393141/250‑1 (MQ=255)                                   ttttgCTTTTTGCCGTCGTGTTACTGGCTGTGGGTCGGTATTGATGGCTTTGTACTGCTCGTCCAGGATGCTAACGGTCCGTCCGATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCTCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGTCCATTGCTTACGATTATTTCGATTTATCGTGTTCGCCCGGGTTGGGGATTTTTGATGGcatcat                                                                                                                                                                                            <  2:272416/247‑1 (MQ=255)                                    tgtgCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGGATTGATGGCTTTATACTGCTAGCCCCGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGGGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGGTCTTCCCGCTGCTGGGGTTCTTCTGCCCCTTGCTTACGGTGGTGGCGATTTATCGTGGTAGCCCGGGCTGGGGGTTTTTGATGGTAACATTg                                                                                                                                                                                          >  1:263457/1‑251 (MQ=255)                                                 ggCGGGTTACTGGCTGTGGGTCGGTATTGATGGCTTTGTACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTAACGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGc                                                                                                                                                                              <  1:171645/250‑1 (MQ=255)                                                                gtgGGTCGGTATTGATGGCTTTGTACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTGTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACggcag                                                                                                                                                              <  2:109173/251‑1 (MQ=255)                                                                 tgGGTCGGTATTGATGGCTTTGTACTGCGCGCCCAGGATGCTAACGGTACTTCCAATCCGTTAATGAAACTGGTGGCAGAGCTACATGGGGCCTGGATGAATAATTTGGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTCTCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGGGATTTTCACggaagg                                                                                                                                                             >  2:1808/1‑251 (MQ=255)                                                                        gTATTGATGGCTTTGTACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGTAATTTGGCGTGATTTTCACGGCAGGCATCACg                                                                                                                                                      <  1:293135/251‑1 (MQ=255)                                                                          aTTGATGGCTTTGTCCTTCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGCAACTGGTGTCATTGCTACCTGGTGCCTGGATGAATAATTTTGTCTAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTAGTATTCTTCTTCCCATTGCTTACGGTGAAGGCGATTTATCTTGGTCTCCCGGGTTGGGGCTTTTTGATTGCATCATTGATGCAATTGTGCGTGCTTTTCACTTCCGGCATCActct                                                                                                                                                    >  1:1968/1‑248 (MQ=255)                                                                                ggCTTTGTGCTGCTCGCCCAGGATGCTAACAGGCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGTTACCTGGTGCTTTGATGAATAATTGTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCTATTGCTTACGGTTATGTCGATTTATCGTGGTCGCCCGTGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCAAGGCAGGCATCACGCTGTTccc                                                                                                                                              <  1:245000/251‑1 (MQ=255)                                                                                               gCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCACGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTATGCCAATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGGGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTTTCCTGCCGTc                                                                                                                               >  1:17931/1‑251 (MQ=255)                                                                                                        gCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTGTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGa                                                                                                                       <  1:22174/250‑1 (MQ=255)                                                                                                               gTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTTTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACTGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGAtc                                                                                                               <  1:321006/251‑1 (MQ=255)                                                                                                                                  gAAACTGGTGGCAGTGCTACCTGGTGCCTGTAGTAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACTGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTgg                                                                                             <  2:401964/250‑1 (MQ=255)                                                                                                                                                 gCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGt                                                                              <  2:115393/250‑1 (MQ=255)                                                                                                                                                           gCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGCCGTTGTGGGACAGTACTTCCAGTCAGCTGACGCt                                                                   >  1:10528/1‑251 (MQ=255)                                                                                                                                                             cTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATATGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTgg                                                                 >  2:59402/1‑250 (MQ=255)                                                                                                                                                                gATGAATAATTTTGTCGAGTCGCCCTTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCa                                                              <  1:188320/251‑1 (MQ=255)                                                                                                                                                                  tGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCAtt                                                            >  1:236463/1‑251 (MQ=255)                                                                                                                                                                   gAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCAtt                                                            <  1:49995/250‑1 (MQ=255)                                                                                                                                                                       aatTTTGTCGAGTCGCCCGTTTTGTGGATCGTCCCGCTGCTGGGATTCTTCTGCCCATTGCTGACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTAttt                                                        <  2:292432/250‑3 (MQ=255)                                                                                                                                                                             gTCGGGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAAt                                                 <  1:380378/251‑1 (MQ=255)                                                                                                                                                                                      cctgtttttttgATCTTCCCGCTGCTGTGATTCTGCTTCCCAGTGCTTACGGTGATGGCGATTTATCGTGGGCGCCCGTGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGGAGGCATCACGCTGTTCCCGTTTGTCAGGCCGTCAAGCGTTAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCGGAGCACGATGTTGGTAATCGTGCTGat                                        <  2:204343/240‑1 (MQ=255)                                                                                                                                                                                            ttGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTTACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATAtttt                                   <  2:354907/250‑1 (MQ=255)                                                                                                                                                                                                   tCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGCCCAtt                           >  1:355810/1‑251 (MQ=255)                                                                                                                                                                                                        ccGCTGCTGGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGCCCATTGTGtt                      <  1:361060/251‑1 (MQ=255)                                                                                                                                                                                                            tgctgGGATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGCCCATTGTGTTGctc                  >  1:108422/1‑251 (MQ=255)                                                                                                                                                                                                                gggATTCTTCTGCCCATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTAGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGCTCCCCTTTGTCATGCCGTCAAGCGTGCGTCCGATATACAACCTGACGTTGTGGGACAGTCCTTCCAGTCAGCTGCCGCTGAGCATTCTGTTGGTAATCGTGCTGGTATTTTTGCCCATTGTGTTGGTCTaa               >  2:361687/1‑249 (MQ=255)                                                                                                                                                                                                                 ggATTCTTCTGCCAATTCCTGACGGAGATGGGGATTCATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGATGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTACGATCTCCAGCCAGACGTTTTGGGAACGTACTTTCAGTCAGGTGACGCTGAGAATTTTGTTGGTAATCGTGATGAAATTTTTGcactttggttttatctaacc             >  2:240879/1‑232 (MQ=255)                                                                                                                                                                                                                            cccATTGCTTACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGCCCATTGTGTTGCTCTACACTCTCTGGAGct  >  1:228274/1‑251 (MQ=255)                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                  GCTGGCGACCAAACGCGCTGCACTGTTGGTGATGCTGTGCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGTATTGATGGCTTTGTACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTGACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGCCCATTGTGTTGCTCTACACTCTCTGGAGCT  >  NC_000913/1039898‑1040367

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑