Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,364,798 C→T G82D (GGC→GAC)  dsbD ← thiol‑disulfide exchange protein DsbD

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,364,7980CT98.0% 159.6 / NA 50G82D (GGC→GAC) dsbDthiol‑disulfide exchange protein DsbD
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (19/30);  minor base G (0/1);  total (19/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

CAATTGCGCGGTGGGCTGCTCTTGCTGCGGAACAGACACAGGCTGTGGCGCTGCGTTGTTGGCGACCACTTCGCTTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATG  >  NC_000913/4364554‑4365031
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                         
cAATTGCGCGGTGGGCTGCTCTTGCTGCGGAACAGACACAGGCTGTGGCGCTGCGTTGTTGGCGACCACTTCGCTTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAAAGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTAAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCg                                                                                                                                                                                                                                     >  2:304326/1‑251 (MQ=255)
    tGCGCGGTGGGCTGCTCTTGCTGCGGAACAGACACAGGCTGTGGCGCTGCGTTGTTGGCGACCACTTCGCTTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGc                                                                                                                                                                                                                                   >  1:271860/1‑249 (MQ=255)
        cgGTGGGCTGCTCTTGCTGCGGAACAGACACAGGCTGTGGCGCTGCGTTGTTGGCGACCACTTCGCTTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGc                                                                                                                                                                                                                             <  1:23337/251‑1 (MQ=255)
             ggCTGCTCTTGCTGCGGAACAGACACAGGCTGTGGCGCTGCGTTGTTGGCGGCAACTTCGCTTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTc                                                                                                                                                                                                                        <  1:347476/251‑1 (MQ=255)
                tgctCTTGCTGCGGAACAGACACAGGCTGTGGCGCTGCGTTGTTGGCGACCACTTCGCTTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGc                                                                                                                                                                                                                     >  2:308467/1‑251 (MQ=255)
                tgctCTTGCTGCGGAACAGACACAGGCTGTGGCGCTGCGTTGTTGGCGACCACTTCGCTTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGc                                                                                                                                                                                                                     >  1:147801/1‑251 (MQ=255)
                 gctCTTGCTTCGGACCAGACACAGGCTGTGGCGCTGCGTTGTTGGCCACCACTTCGCTTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATTAGCTCAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCCCTAGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCggta                                                                                                                                                                                                                    <  2:103683/251‑3 (MQ=255)
                          gcGGAACAGACACAGGCTGTGGCGCTGCGTTGTTGGCGACCACTTCGCTTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTcgcg                                                                                                                                                                                                           <  1:66387/251‑1 (MQ=255)
                                cAGACACAGGCTGTGGCGCTGCGTTGTTGGCGACCACTTCGCTTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTcc                                                                                                                                                                                                     <  1:336691/251‑1 (MQ=255)
                                           tgtgGCGCTGCGTTGTTGGCGACCACTTCGCTTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCTTCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTCATGCg                                                                                                                                                                                          >  2:110222/1‑251 (MQ=255)
                                            gtgGCGCTGCGTTGTTGGCGACCACTTCGCTTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCgg                                                                                                                                                                                         <  1:55068/251‑1 (MQ=255)
                                                     cGTTGTTGGCGACCACTTCGCGTAACGGAACGGTGTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAAGTTTCGCGTGTTCCGGCGTAATGCTGATCTGTTTa                                                                                                                                                                                <  2:123778/251‑1 (MQ=255)
                                                        tgttgGCGACCACTTCGCTTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACg                                                                                                                                                                              <  1:211746/250‑1 (MQ=255)
                                                                 ccACTTCGCTTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGgtag                                                                                                                                                                    <  2:303619/251‑1 (MQ=255)
                                                                        gCTTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGGAGTAACCGt                                                                                                                                                             >  2:218560/1‑251 (MQ=255)
                                                                                gaacggTTTTGGTTTCTGGCGGATAACAGAAACCGGCAGCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCGTTGATc                                                                                                                                                     <  2:147801/251‑1 (MQ=255)
                                                                                   cggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGTCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTGGATCTGc                                                                                                                                                  <  2:357550/251‑1 (MQ=255)
                                                                                       tttGTTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCTCTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATTCCAGACTTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTATTAACCGTCTGTTATCTGCCAg                                                                                                                                               <  1:385546/250‑1 (MQ=255)
                                                                                       tttGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGATGTAGTAACCGTCTTTGATCTGCCAg                                                                                                                                               <  1:385522/250‑1 (MQ=255)
                                                                                           gTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTc                                                                                                                                            >  1:277613/1‑249 (MQ=255)
                                                                                                 ggCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGGCAGATTa                                                                                                                                      <  1:203487/249‑1 (MQ=255)
                                                                                                  gCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAgg                                                                                                                                   >  1:123290/1‑251 (MQ=255)
                                                                                                    ggATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTc                                                                                                                                 >  2:184561/1‑251 (MQ=255)
                                                                                                         aCAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGCGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGtt                                                                                                                            >  1:32504/1‑251 (MQ=255)
                                                                                                                ccGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTg                                                                                                                     >  2:232790/1‑251 (MQ=255)
                                                                                                                 cGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAAGCTCGCTTTTGTCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTga                                                                                                                    <  2:224869/251‑2 (MQ=255)
                                                                                                                     aTCAGCACAGCCCTGGTAGGTGACCGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGGTTTGCTGa                                                                                                                 >  2:246658/1‑250 (MQ=255)
                                                                                                                        aGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAAt                                                                                                             <  1:112185/251‑1 (MQ=255)
                                                                                                                         gcccaGCCCGGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGTCTGGTTGATGGTGACGGGAAGCGTCAGGCGATCGCGGGAAATCGCTCGTTTGCCGTAAAACTCATCTTCATGCCAGTCGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTTTTCCGGTGTAATGCGGATCTGTTTACGGTAGTGGTAGTATCCGTCTTTGATCTGCCAGTTCAGATGAAGTTCATTTTGGTTTGGCTTAAAATc                                                                                                            <  2:363020/248‑1 (MQ=255)
                                                                                                                                        gTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGATGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTg                                                                                             <  1:147301/251‑1 (MQ=255)
                                                                                                                                         tGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTg                                                                                             >  1:278224/1‑250 (MQ=255)
                                                                                                                                                tAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGTTGAAAATCAAAAGCAAAGGCTTGATCcgcg                                                                                      <  1:184561/250‑1 (MQ=255)
                                                                                                                                                          cccGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAAtt                                                                            <  1:308467/250‑1 (MQ=255)
                                                                                                                                                           catgacgagCCTGTTTGATGGTGTCGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGGCTTGCGGCAGCTGCACGTCGGCAATTTTCGTGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATtgt                                                                          <  2:111194/243‑1 (MQ=255)
                                                                                                                                                                        gTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATTGTGAACGTCCCGgcg                                                             >  1:55244/1‑251 (MQ=255)
                                                                                                                                                                            aTGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATTGTGAACGTCCCGGCGCGTc                                                         <  1:383445/251‑1 (MQ=255)
                                                                                                                                                                              ggagACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCAAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCTGGTTAAGGTCATGTTGGTTTTGCTGAAAATCAAACGCAAAGGCTTGTTCCGCGGGGACAAATTGTGGACGTCCCGGCGCGTCgg                                                       >  2:187589/4‑250 (MQ=255)
                                                                                                                                                                                 gACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATTGTGAACGTCCCGGCGCGTCGaata                                                    <  1:359793/251‑1 (MQ=255)
                                                                                                                                                                                 gACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATTGTGAACGTCCCGGCGCGTCGaata                                                    <  1:47585/251‑1 (MQ=255)
                                                                                                                                                                                            tCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATATTCATGCCAGACGTCTTACGGCAGCTGCACGGCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGAAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGCTTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCaaa                                          >  2:386107/1‑250 (MQ=255)
                                                                                                                                                                                             cAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCaaaa                                         <  2:367735/250‑1 (MQ=255)
                                                                                                                                                                                               gCCGAACGCGTTAAATCTCGCTTTATCCGTAAAACTCATCTGCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGTAATTTTCGCGTTTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCATATTAAGGGCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGTGGACAAATTGTGAACGTCCCAGCTCGTCGATTAATCCGCCAAAAACg                                      <  2:239519/251‑1 (MQ=255)
                                                                                                                                                                                                         gTAAATCTCGCTTTTGCCGTAACAATCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGtgctgc                            >  2:250550/1‑251 (MQ=255)
                                                                                                                                                                                                            aaTCTCGCGTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGGTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCaaa                         <  2:333776/251‑1 (MQ=255)
                                                                                                                                                                                                                 cGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTa                      <  1:218560/249‑1 (MQ=255)
                                                                                                                                                                                                                 cGCTTTTGCCGTAAAAATCATCTTCAGGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATGTGCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGATGTAGTAAGCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTGTTGCTGAAAATCAAAAGCAAAGGCTTGAGCCGCGGGGACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCTAAAACGGAAGTGCGGCAAAg                        <  2:388062/247‑1 (MQ=255)
                                                                                                                                                                                                                      ttGCCGTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCTGAAATTTTCGCGGGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAACGCAAAGGCTTGATCCTCGGGGACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTTGCAGGa                <  1:34202/250‑1 (MQ=255)
                                                                                                                                                                                                                           gTAAAACTCATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCg          >  2:255373/1‑251 (MQ=255)
                                                                                                                                                                                                                            tAAAACTCATCTACATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGAGGATCTGTTTACGGGAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGTTCAggct         >  2:126741/1‑248 (MQ=255)
                                                                                                                                                                                                                                   cATCTTCATGCCAGACGTCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATg  <  1:339646/251‑1 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                         
CAATTGCGCGGTGGGCTGCTCTTGCTGCGGAACAGACACAGGCTGTGGCGCTGCGTTGTTGGCGACCACTTCGCTTAACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCAGCTGCACGTCGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATG  >  NC_000913/4364554‑4365031

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: