| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,325,837 | C→T | intergenic (‑96/+562) | yjdN ← / ← yjdM | PF06983 family protein YjdN/zinc ribbon domain‑containing protein YjdM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,325,837 | 0 | C | T | 89.8% | 119.0 / NA | 51 | intergenic (‑96/+562) | yjdN/yjdM | PF06983 family protein YjdN/zinc ribbon domain‑containing protein YjdM |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (28/16); minor base G (3/2); total (33/18) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTTCTCGGCGCTGTCCTGCGCTGATTTTGGCATTTCGCCGAAGCTGATTTTATAGAGCAGTTCCGCGCCCAACGTACGTTGATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAAC > NC_000913/4325601‑4326068 | gTTCTCGGCGCTGTCCTGCGCTGATTTTGGCATTTCGCCGAAGTTGATTTTATAGAGCAGTTCCGCGCCCAACGTACGTTGATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGCTGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACAGTTg > 2:137558/1‑251 (MQ=255) cGGCGCTGGCCTTCGCTGATTTTGGCATTTCGCCGAAGTTGATTTTATAGAGCAGTTCCGCGCCCAACGTTCGTTGATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGATGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGGGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCgg < 2:113560/250‑1 (MQ=255) cgcTGTCCTGCGCTGATTTTGGCATTTCGCCGAAGTTGATTTTATAGAGCAGTTCCGCGCCCAACGTACGTTGATAATAGGCAATCGCGGCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATgc < 1:55365/251‑1 (MQ=255) gcTGTCCTGCGCTGATTTTGGCATTTCGCCGAAGTTGATTTTATAGAGCAGTTCCGCGCCCAACGTACGTTGATCATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGCCTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGGAGTCGGCACTGTTGCCGGATgcg > 2:286919/1‑251 (MQ=255) tCCTGCGCTGATTTTGGCATTTCGCCGAAGTTGATTTTATAGAGCAGTTCCGCGCCCAACGTACGTTGATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGt > 1:57431/1‑251 (MQ=255) gcgcTGATTTTGGCATTTCGCCGAAGTTGATTTTATAGAGCAGTTCCGCGCCCAACGTACGTTGATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGCTAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTaagc > 2:104283/1‑249 (MQ=255) tGGCATTTCGCCGAAGTTGATTTTATAGAGCAGTTCCGCGCCCAACGTACGTTGATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATcc < 2:76122/250‑1 (MQ=255) ccGAAGTTGATTTTATAGAGCAGTTCCGCGCCCAACGTACGTTGATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACgg > 1:302313/1‑249 (MQ=255) gAAGTTGATTTTATAGAGCAGTTCCGCGCCCAACGTACGTTGATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGGAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAggg > 1:272496/1‑251 (MQ=255) gAAGTTGATTTTATAGAGCAGTTCCGCGCACCACGTACGTTGATAATAGGCAATCGCGACGGAACCGTTACCGGCAAAAGAGAGGTAGGGCCTTAACGGCATGCTGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGGGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAAAGCCTTATCCGGCCTACGGAggg > 2:361771/1‑251 (MQ=255) aTTTTATAGAGCAGTTCCGCGCCCAACGTACGTTGATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGa < 1:76394/251‑1 (MQ=255) ttATAGAGCAGGTCCGCGCCCAACGTACGTGGATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCTAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGTGTGCGGGAAt < 1:265760/250‑1 (MQ=255) gCAGTTCCGCGCCCAACGTACGTTGATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGGATTTGTAGGc > 2:288171/1‑251 (MQ=255) gatCCGCGCCCACCGTACGTTGATCATAGGCAATCGCGTCGGAACAGTTACCGGCACAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGAAGTTCGAACTTTATACAGATGAGAGGCGGCCTGATAAGACGCGAGAGCGTCGCATCAGGGAGTCGGCACTGTTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTTGGCCTg > 2:86780/3‑251 (MQ=37) cccGCGGCCAACGTACGTTGATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGGGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGAt < 2:124827/250‑1 (MQ=255) ccAACGTACGTTGATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcgc > 1:132705/1‑251 (MQ=255) gtacgtTGATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCa > 1:1897/1‑249 (MQ=255) cgtTGATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGAAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCAATGTGGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCgg > 1:103200/1‑250 (MQ=255) gATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGc < 1:140853/250‑1 (MQ=255) gATAATAGGCAATCGAGGCGGCCCAGTTACCGGCAACAGAGAGGTAGGGACTTAACGGCATGAAGGTGCCCTCAGTTAAGAGAAGACAGTTCAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTAGCATCCGGTAGACGGCACTGTTGCCGGATGAGGCGGAAACGCCTTATCCGGCCTACGGATGGTGCGGGAAATTGTAGGCCTGATCAGAcccgacaacgtaga > 2:335168/1‑237 (MQ=21) taataGGCAATCGCGTCGGAACAGTTACAGGCAAAAGAGAGGCAGGGACTTAACGGCATGATGGTGACATCAGTTAAGAGAAGCCAGTTAAGTGTAGGTCGAAATTTATACAGATGAGAGGCGGACTGATAAGACGCGCGAGCGTCGCATCCGGAAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGGATGTGTCGGCCTGATAAGACCCACAAGCACCGCATc > 2:77417/1‑251 (MQ=25) gCAATCGCATCGAAACAGTTACAGGCCAAAGAGAGGTAGGGACTTAACGGCATGATGGGGACCTCCGTTAAGAGCAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGCGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTCAACGCCTTATCCGGCCTACGGAGGGGGCGGGGATTTGTAGGCCTGATAAAACGCGCAAGCGTCGCATCCGGc > 2:184206/1‑249 (MQ=255) cAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGt < 1:350403/251‑1 (MQ=255) aaTCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTc < 1:184206/251‑1 (MQ=255) cgTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCAc > 1:236842/1‑251 (MQ=255) tACCGGCAAAAGAGAGGTAGGGACTTAACGTCATGATTGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTTCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCTGTCGGCACCATTGCCGGAt < 1:382563/250‑1 (MQ=255) aaaGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGGGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTa > 1:162802/1‑250 (MQ=255) aaGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAAACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGGGCGGGCATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCCAGCAGTCGGAACCATTGCCGGATgcggcggaa > 2:350140/1‑247 (MQ=25) agagagGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAAc < 1:303463/251‑1 (MQ=255) cTTAACGGCATGATGGAGACCTCAGTTAAGAGAAGCCAGATCAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTCGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGAGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGGAAACGCCTTACCCGGcc > 2:138487/1‑251 (MQ=18) aaCGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTGCGAAATTTATACAGATGAGAGGCGGCCTGAGAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc < 2:57431/251‑1 (MQ=255) aCGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTAAACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGGAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACg < 2:309228/251‑1 (MQ=255) tgatgGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGt > 1:284573/1‑251 (MQ=255) aaGAGAAGCCAGCTAAGTGTAGTTCGCAATTTATACAGATGAGAGGCGGCCAGATAAGACGCCCGAGCGTCGCATCAGATAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTCGGCCTGCTAAGAAGCGCAAGCGTCGCACCAGGCAGTCGGCACCATTGCCGGCTGCGGCGCAAAAGCCTAATCCGGCCTACGGAGGGGGCGGGCATTTGTAGGcc > 2:47552/1‑251 (MQ=17) agagAAGACAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGCTGCGGCGTAAACGCCTTATCCGGCATACGGAGGGTGCGGGAATTTGTAGGCCt > 1:345466/1‑251 (MQ=255) aGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGCTACGACGCGCGAGCGTCGCATCAGGAAGTCGGCACTGTTGCCGGCTGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCCTCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTCTCCGGCCTACGGAGGGCGCGGGCATTTGTAGGCTTGATTAGAcg > 2:50858/1‑251 (MQ=17) aGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcg > 1:42837/1‑251 (MQ=255) aGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCCCCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGCTAAGACGCGCa > 2:190882/1‑250 (MQ=255) aGTTCTAAATTGTTACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCTGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGTCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAATCGTCGCATCAGGCAGTCGGCACCATTGCCGTATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTc < 1:238027/251‑1 (MQ=14) aTTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAgg > 1:64887/1‑251 (MQ=255) aCAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGAGCGGGAATTTGTAGGCCTGATAAGAAGCGCAAGCGTCGCATCAGGCAGTCg > 1:23847/1‑251 (MQ=255) tGAGAGGAGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGGGCGGGAATTTGTAGGCCTGTTAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCAcc > 2:265533/1‑251 (MQ=255) agGCGGACTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTAGCCGGCCTACGGAGGGTGCGGGAAGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTg < 1:104283/251‑1 (MQ=255) cggcCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCg > 1:58565/1‑251 (MQ=255) gcCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCCTCCGGCCGTAGGCACCGTTGCCgg > 2:280900/1‑250 (MQ=255) gATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATgcg < 1:190882/251‑1 (MQ=255) aTAAGCCGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGACTTATCCGGCCTCCGGAGGGTGCGGGACTTTGTAGACCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATACGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGACAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATgggg > 2:197092/1‑248 (MQ=14) aaGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTCAACGCCTTATCCGGCATAAGGAGGGTGCGGGCATTTGTAGGCATGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGCATTTGTAGGACTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGCTGCCGGATgcggcg > 1:253720/1‑251 (MQ=14) aaGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACCCGCACGCGTCGCATCAGGCAGGCGGCACCGTTGCCGGTTgcggcg > 2:110458/1‑251 (MQ=255) aaGACGCGCGAGCGTCGCATCAGGGAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATgcggc < 1:335168/250‑1 (MQ=255) gcgcgAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAAc < 1:288171/251‑1 (MQ=255) | GTTCTCGGCGCTGTCCTGCGCTGATTTTGGCATTTCGCCGAAGCTGATTTTATAGAGCAGTTCCGCGCCCAACGTACGTTGATAATAGGCAATCGCGTCGGAACAGTTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAAC > NC_000913/4325601‑4326068 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |