| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,322,605 | C→T | intergenic (‑183/+731) | phnF ← / ← phnD | putative transcriptional regulator PhnF/phosphonate/phosphate ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,322,605 | 0 | C | T | 98.4% | 187.3 / NA | 62 | intergenic (‑183/+731) | phnF/phnD | putative transcriptional regulator PhnF/phosphonate/phosphate ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base T (39/21); minor base G (1/0); total (40/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 | |||||||||||
CAAGTTTTGCGGCTATCTCTTGATAGCGTGTTGGGTAGCTGGTCGGATGTGTAGACAAGTGCATAGATATCAATGCCTCGCTTATCAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGC > NC_000913/4322359‑4322846 | cAAGTTTGGCGGCTATCTCTTGATAGCGTTTTGGGTAGCTGGTCGGATGTGTAGACAAGGGCATAGATATCAATGCCTCGCTTATCAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCg < 2:121220/251‑1 (MQ=255) aGTTTGGCGGCTATCTCTTGATAGCGTGTTGGGTAGCTGGTCGGATGTGTAGACAAGTGCAAAGATATCAATGCCTGGCTTATCAGATAAAGGGCTTACGCAACCGTTGAGAGAGGAAACCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGTTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAg < 1:255509/251‑1 (MQ=255) tttGCGGCTATCTCTTGGTAACGTGTTGTGTAGCTGGTCGGATGTGTAGTCAAGTGCATAGATATCAATGCCTCGCTTATCAGATAACGGGCTTACGCATCCGTTTAGAGAGGATATCCAGCAGGCTGACCGTGACGATGACAAGCACCATC‑AGGGAGCAGGTTTGTTGGAAATGGAAACCACGAATCGCTTACCACAGGGTGACGTCGATCCCGCCTGCGCCTACCATGCCGACGACGGTTGCCGAGctg > 2:17725/1‑249 (MQ=255) ggCTATCTCTTGATAGCGTGGTGGGTAGCTGGTCGGATGTGTAGACAAGTGCATAGATATCAATGCCTCGCTTATCAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGtt < 1:279419/251‑1 (MQ=255) gggTAGCTGGTCGGATGTGTAGACAAGTGCATAGATATCAATGCCTCGCTTATCAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGTTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAg < 1:177778/251‑1 (MQ=255) aGCTGGTCGGATGTGTAGACAAGTGCATAGATATCAATGCCTCGCTTCTCAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCAGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAGGCGATAGAGGGAGTAgg > 1:32707/1‑251 (MQ=255) ggTCGGATGTGTAGACAAGTGCATAGATATCAATGCCTCGCTTATCAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGAGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGgagtt > 2:298330/1‑249 (MQ=255) ggTCGGATGGTTAGCCAAGTGCATAGATATCAATGCCTCGCTTATCAGATAAAGGGCTGCCGCAACCGTTGAGAGAGGAAAGCCAGCAGGTTGACGGTGACGATTATAAGCACCAGC‑AGGGCGCAGGTTTGGTGGAATGGGAATCCGGGATTCGCTTCCCACAGGGGGCCGCGGATCCCGCCTTCGCCGACCATGCTGACGACGGTTGCCGAGCGGACGTTGGAGTCGAAGCGATAGAGTGAGTAGGAGAt < 2:52763/251‑1 (MQ=255) cggttgtgTAGACAAGTGCTTAGATATCAATGCCTCGCTTATCAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCTCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATcag < 1:191338/247‑1 (MQ=255) cGGATGTGTAGACAAGTGCATAGATATCAATGCCTCGCTTATCAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGCTTCGAAGCGCTAGAGGGAGTAGGAGATc > 2:93921/1‑249 (MQ=255) tgtgTAGACAAGTGCATAGATATCAATGCCTCGCTTATCAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGt > 1:198569/1‑251 (MQ=255) aGACAAGGGCATAGATATCAATGCCTCGCTTATCAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGCCGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACATGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGATGCGTTAGTGGGCGTAGGAGATCAGCAGTGGCAt > 2:140038/1‑251 (MQ=255) cAAGTGCATAGATATCAATGCCTCGCTTATCAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATAAAGAAGGCTGACCGTGACGATGATAAGCACCATA‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGACTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCAc > 1:33242/1‑251 (MQ=255) aaGTGCATAGATATCCATGCCTCGCTTATCAGATAAAGGGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCCTC‑AGGGCGCAGGTTTGTTGGAACTGGACACCGCGAATCGCTTCCCACAGGGGGACGCCGATCCCGCCTACGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTAGCAGCGCTAGAGGGAGTAGGAGAACAGCAGAGGAATCAcc > 1:271171/1‑251 (MQ=255) aaGTGCATAGATATCAATGCCTCGCTTATCAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCAcc < 1:376240/251‑1 (MQ=255) gTGCATAGATATCAATGCATCGCTTATCAGATCAAGTGCTTACGAAACCGTTGAGAGAGGAAATACAGCAGGACGACCGTGACGATGATAAGCAACATC‑AGGGCGCAGGATTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGACGACGACGGTTGCCGGGCGGACGGTGGATTCGAAGAGAGAGAGGGAGTAGGAGATCAGAAGAGGCATCACCtg > 1:93447/1‑251 (MQ=255) cATAGATATCAATGCCTCGCTTATCAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACGGGGACGAGGAAAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTgg < 2:362275/251‑1 (MQ=255) tAGATATCAATGCCTCGCTTATCAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGgc > 1:169781/1‑250 (MQ=255) taccAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAAACCAGCAGGCTGACCGTGACGATGATAAGCCCCATC‑AGGGCGCAGGTTTGGTGGAACTGGAACCCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGAtc < 2:83104/246‑1 (MQ=255) cAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGCTGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGCCGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTCGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTc > 2:130238/1‑251 (MQ=255) cAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTc > 1:313708/1‑251 (MQ=255) aGATAAAGTGCTTACGCAAACGTTGAGAGAGGAACTCCAGCAGGCTGACAGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGAACCCGCCTGCGCCGACCATGCCGACGACGGTGGCCGAGCGGACGTTGGATTCGAAGCGATGGCGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGGAGAGGATCGCTTCg > 2:266401/1‑251 (MQ=255) cTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTgg > 1:217650/1‑251 (MQ=255) ttACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATACGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTCGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGc > 2:28257/1‑251 (MQ=255) ttACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGc > 1:253498/1‑251 (MQ=255) caccgctaCCGTGGAGAGAGGAAATCCAGCTGGTTGAACGGGACGATGATAAGCACCAGC‑AGGGCGCAGTTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCGCAGTGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCTGTCGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGTAGCGCCTGTGGCAGCACGCCGGGGAGTATCGCTTAGAGTTTGTTGGc < 2:233866/244‑1 (MQ=255) cGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGAGGATAAGCCCCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCAcc < 1:128027/251‑1 (MQ=255) cAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCgg > 2:252248/1‑251 (MQ=255) cGTTGAGCGAGGACATCCAGCAGGCTGACCCGGACGATGATATGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTACCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGTCGACGGTTGTCGAGCGGACGTTGGATTCGATGCGATAGAGGGAGTAGGAGTTCAGCATCGGCATCACCTGTGGCAGCACTCCGTCGAGGCTCTCTTCGTGCTTGTTGGCACCGGTgtc > 2:249345/1‑249 (MQ=255) cGTTGAGCGAGGAAATACAGCAGGCTGACCGTGACGATGCTAAGCAC‑ATCCAGCGAGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTACCAACGGGTGACGCCGATCCCGCAAGCGCCGACCATGCCGACGACGGATGCCGCGCGGCAGTTGGATTTGAAGCGCAAGAGGGAGCAGGAGATCAGCCGTGGCATCACCTGTGGACGCACGCCGTAGAGGATCTCTTCGAGCTTGTGGGCaacgcaggc > 2:402379/1‑243 (MQ=255) gagagTAAATCCAGCAGGCTGACCTTGACGATGAAAAGCCCCATC‑AGGGCGCAGGTTTGTTGGAACTGAAAACCGCCAATCGCTTCCCCCGGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGTTGGCGCGAAt < 2:64596/251‑1 (MQ=255) taaTCCAGCAGGCTGACCGTCACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGATCTTGTTGGCACCGGTGGCGCGAATGCCTTc > 2:85025/2‑251 (MQ=255) cggCTGACCGTGACGATGATAAGCCCCACC‑AGGGCGCAGGTTTGTGGGAACTGGCACCCGCGAATCGCTTCCCACAGGTTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTGCTAGCTTGTTGGCACCGGTGGCTCGAATGCCTTCCTccgggcc < 2:24566/250‑1 (MQ=255) tGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACcgggccgggc > 1:306680/1‑251 (MQ=255) taCCGTGACGATGATAAGCACCATC‑AGGGCTCAGGTTTGTTGGACCTGGAAACCGCGAATCGCTTCCCTCAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCTCCGGTGGCGCGAATGCCTTCCACcgggccgggc < 1:237642/249‑1 (MQ=255) gTGACGCTGAGAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGCGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGGGGCGCGAATGCCTTCCACCGGGCCGGGCTCaac > 2:41189/1‑250 (MQ=255) gTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACAGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGACGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGCGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAAt > 1:378587/1‑251 (MQ=255) tGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCCCCGGGCCGGGCTCAATc > 1:313296/1‑251 (MQ=255) tGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATc > 1:220017/1‑251 (MQ=255) aGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGc > 2:201173/1‑251 (MQ=255) accttC‑AGGGCGCAGTTTTGTTGGAACTGGAAACCGCGAACCTCTTCCCACAGGGTGACGCCGAGCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTc < 1:68191/247‑1 (MQ=255) cccatgggggCGCAGGTTGGTTGGACCGGGAACCCGCGAATCGCTTCCCAAAGGGGGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTc < 2:182809/244‑1 (MQ=255) cATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCgg > 1:147042/1‑251 (MQ=255) ggCGCATGTTTGTTGGAACTGGAACCCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGTCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAagca < 1:379755/251‑1 (MQ=255) cAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCtt > 1:308509/1‑251 (MQ=255) gttgGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGc > 1:7244/1‑251 (MQ=255) aaCTGGAACCCGCGACTCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGTCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGTAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTGCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGcc < 1:170657/251‑1 (MQ=255) agtGGAAACCGCGAACCGCTTCCCACAGGGGGACGCCGATCCCGCCTGCGCCGACCAGGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGGAGGAGATCAGCAGTGGCATCACCGGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCg < 2:198569/249‑1 (MQ=255) gAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGCTAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCCCCGCTTCGGAAAGCAGCTTGGAGAGCACGCCggggg > 2:29470/1‑248 (MQ=255) aCCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCAACGGCGGCCCGAATGCCTACCACCGGGCCGGGCCCAATCGCTTCCACCGCTTCGAAAAGCAGCTTGGAGAGCACCCCGgtggtgg > 2:315661/1‑250 (MQ=255) cTTCCCACAGGGTAACGCCGATCCCGCCTGCGCCGACCCTGCCGACGACGGTTGGCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGAACCGGAGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTACACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGTGGTGTGGATCAACAgg > 2:258925/1‑250 (MQ=255) tCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATCGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGCGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAAAAgcgc > 2:118419/1‑251 (MQ=255) tCCCACAGGGTGACGCCGATCCAGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAgcgc > 2:364783/1‑251 (MQ=255) aGGGTGACACCGATCCCGCCTGCGCCGACCAAGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCAACTGTGGCAGCACGCCGTCGAGGATCTCTTCGAGATTGTTGGCACCGGTGGCGCGAGTGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGCAAGCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGcgccagcac > 2:203971/1‑251 (MQ=255) aCGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGCACGATGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGAGGCATCACCTGTGGCAGCACGCAGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGCATGACTTCCACCGGGCCGGGCTCAATCGATTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGTGGGGTGGATAAACAGcgccagcacgccagc > 1:34511/1‑251 (MQ=255) ccGACCCCGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGccagcacgccagcacg < 1:130238/251‑1 (MQ=255) tCCCGCCTGCGCCGACCATGCCGCCGACGGTTGCCGAGCGGACGTTGAATTCGAAGCGGTAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGGGGTGTGGATAAACAGCGCCagcacgccagcacgcc > 1:227733/1‑249 (MQ=255) cGCCTGCGCCGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCCTCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGTGGTGTGGCTAAACAGCGCCAGCACGCCAGCCCGCCAGCg > 2:343562/1‑250 (MQ=255) cGCCTGCGCCGACCACGCCGACGACTGTTGCCGAGGGGAGGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGa < 1:140038/251‑1 (MQ=255) tccGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGGGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCCGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCCGCACGCCAGCCCGCCAGCGCCCGggcc > 2:180479/2‑251 (MQ=255) cGACCATGCCGACGACGGTTGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGTGGGGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGggccg > 2:307924/1‑250 (MQ=255) gcggacgGTTGCCGAGCGATCGTTGATTTCGAGGAGATAGAGGGAGTAGGGTATGAGCAGAGGCATCCCCTGTGGCAGCTCGCCGTAGAGGATCGCTGCGAGCTTTTTGGCACCGGTGGCGCGAATGCCTTCCACCGTGACGGGCTCAATCGCTTCCGCCGCTCCGGAAAGCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGc < 2:1911/248‑1 (MQ=255) | CAAGTTTTGCGGCTATCTCTTGATAGCGTGTTGGGTAGCTGGTCGGATGTGTAGACAAGTGCATAGATATCAATGCCTCGCTTATCAGATAAAGTGCTTACGCAACCGTTGAGAGAGGAAATCCAGCAGGCTGACCGTGACGATGATAAGCACCATC‑AGGGCGCAGGTTTGTTGGAACTGGAAACCGCGAATCGCTTCCCACAGGGTGACGCCGATCCCGCCTGCGCCGACCATGCCGACGACGGTCGCCGAGCGGACGTTGGATTCGAAGCGATAGAGGGAGTAGGAGATCAGCAGTGGCATCACCTGTGGCAGCACGCCGTAGAGGATCTCTTCGAGCTTGTTGGCACCGGTGGCGCGAATGCCTTCCACCGGGCCGGGCTCAATCGCTTCCACCGCTTCGGAAAGCAGCTTGGAGAGCACGCCGGTGGTGTGGATAAACAGCGCCAGCACGCCAGCACGCCAGCGAACGGGCCGAGGCCGACGGC > NC_000913/4322359‑4322846 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |