| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,193,820 | C→T | G129R (GGA→AGA) | thiE ← | thiamine phosphate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,193,820 | 0 | C | T | 94.9% | 145.7 / ‑4.9 | 59 | G129R (GGA→AGA) | thiE | thiamine phosphate synthase |
| Reads supporting (aligned to +/- strand): ref base C (0/3); new base T (28/28); total (28/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCTGCAATTTCCAGCAACTGTGCCGTTGCCAAA‑CGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTG‑CTATCACC‑GCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCC > NC_000913/4193585‑4194061 | ccggCAATTTCCAGCACCTGGGCCTTTGCCAAA‑CGCCGGCCTGCGGCTTGAGTAATGGCGCTGCCGAGGGCGATACTGCCGACACCCGTTG‑CTATCACC‑GCAGGCGCGCGTGCCAGACGGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATaa < 1:187778/246‑1 (MQ=255) cAATTTCCAGCAACTGTGCAGTTGCCAAA‑CGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTG‑CTATCCCC‑GCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACAACTGTCTCAGCGCGATATAAGAgggg > 1:331507/1‑251 (MQ=255) aTTTCCAGCCACTCTGCAGTTGCCAAA‑CGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGACGATACTGCCGACACCCGTTG‑CTATCACC‑GCAGGCGCACGTGCCAGACTGATACCGCCAATCGCCCCGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCTGTGCAGACGGCATCTGTTTGGTTTGCGTCGGGAACACCTTTCTCAGCGCGCTATCAGAggtgct > 2:204557/1‑247 (MQ=255) tCCAGCAACTGTGACGTTGCCAAA‑CGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGAAACCCGTTG‑CTATCACC‑GCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGGGGGATAATCCGCCAGTCGATCACCATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGGACACATGTCTAAGCGCGATATAAGATGGGCGtgc > 1:61177/1‑251 (MQ=255) cAGCACCTGTGCCGT‑GCCAAAACCCCAGTCTGCGGCTGGAGTAAGGGCGCGGAGGACGGCGAGACTGCCGACACC‑GTTGGCAATCCCC‑CCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTTCGGTGCAGAAGGCATCTGTTTGGGTGGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGTGGCGtgctg < 2:395282/251‑1 (MQ=255) cAGCAACTGTGCCGTTGCCAAA‑CGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTG‑CTATCACC‑GCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGGGCAGAAGGCATCTGGTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGGTATAAGAGGGGCGtgctg > 2:293740/1‑251 (MQ=255) tgtgCAGTTGACAAA‑CGCCAGTCTGCGGCTTGAGTAATGGCGGTGACGACGGCGATACTGCCGACACCCGTTG‑CTATCACC‑GCAGGCGCGCGTGCCAGCCTGCTACCGCCAATCGCCACGGGGGGCTAATCCGCCAGTCGCTAACCATGCCGTGCCAGCTGTTCCAGCCCCTCCGGCGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACCCATTTCTCAGCGCGATATAAGAGGGGCGTGCTGCCCgcgc > 2:371619/1‑251 (MQ=255) tgCCGTTGCAAAA‑CGCAAGTATGCTGCTTCAGTCATGGCGCTGCCGACGGCGATACTGCCGACAACCGTTG‑TTATCACC‑GCAGGCGCGCGTGCCAGACTGATAACGCCACTCGCCACGGTGGGATAATCAGACAGTCGCTCAACATGCCGTGCCAGCTGTTCCAACCCCTGCGGTGCCGAAGGCCTATGTTTGGTTGACGTGGGGGACACATGACTCCGAGCGGTATAAGAGAGGCGTGCTGCCAGagcg > 2:234920/1‑250 (MQ=255) cGTTGCCAAA‑AGACAGTCTGCGGCTTGAGTAATAGCGCTGACGACGGCGATACTGCCGCCACCCGTTG‑CTATCACC‑GCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGGGGGGTAATCCGCCAGTCGCTCAACATGCCGTGCAAGCTGTTCCCGCCCCTGCGGTGCAGAAGGCATCTGTTTGGGTTGCGTCGGGAACACCTGTCTCAGCGCGATATAAGAGGGGCGGGCTGCCAGCGCGCCGt > 2:244250/1‑251 (MQ=255) ttGCCAAA‑CGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTG‑CTATCACC‑GCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGGGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCg > 2:7836/1‑251 (MQ=255) gCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTG‑CTATCACC‑GCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCat > 2:13057/1‑250 (MQ=255) tagCGGCTTGAGAAAGGGCGCTGACGAGGGCGATACTGCCGACCCCCGTTG‑CTATAACC‑GCAGGAGCGCGTGCCAGACTGATACCGCCAATCGCCAAGGTGGGCTAATCCGCCGGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTTGTTGATTTTCGTCGGGAACACCTGTCTCAGCGCGCTATAAGGGGGGCGTGGTGCCAGCGCGCCGTCGTTTTCCATATCGTct > 2:129383/3‑250 (MQ=255) cTGCGGCGTGAGGAATGGCGCTGACGACGGCGATACTGCAGACACCCGTTG‑CTATCACC‑GCAGACGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCATCGGGAACACATGTATCAGCGACATATAAGAGGGGCGTGCTGCAAGCGCCACGACTGTTTCCATATcctc > 2:129381/1‑247 (MQ=255) cGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTG‑CTATCACC‑GCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCACCGCGACGTCGATTTCCATATCGTCAtgt > 2:214392/1‑251 (MQ=255) ggCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTG‑CTATCACC‑GCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCAtgtg > 2:101920/1‑251 (MQ=255) ggCTTGAGTAAGGGCGCTGACGACGGCGATACTGCCGACACCCGTTG‑CTATCACC‑GCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCAtgtg < 1:351872/251‑1 (MQ=255) tggagtatgggctcTGAGGACGGCAGTACTGCCGCCACCCTTTG‑ATA‑CACCCGCAGGCCCGCGTGCCAACCTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCAGCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTc < 2:325276/237‑1 (MQ=255) tGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTG‑CTATCACC‑GCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCg > 1:319301/1‑250 (MQ=255) aTGGCGCTGACGACGGCGATACTGCCGACACCCGTTG‑CTATCCCC‑GCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGcc < 1:54383/251‑1 (MQ=255) tacgacgGCGCTACTGCCGACACCCGTTG‑CTATCACC‑GCAGGCGCGAGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCCGCGAGACGTCGCTTTCCCTATCGTCATGTGTCGCACCTCCCAGCCGcc > 2:250342/2‑250 (MQ=255) acgGCGATACTGCCGACACCCGTTG‑CTATCACC‑GCATGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGCTATAAGAGGGGCGTGCTGCCAGCGCGAAGTCGATTTCCATATCGTCATGTGTCGAAAAGCCCAGCCGCAGGcc > 2:309095/1‑251 (MQ=255) gggcgttacccccgccacCCGTTC‑CTACCCCC‑GCAGGCGCGCTGGCCAAACTAATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGAGTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCt < 2:137707/236‑1 (MQ=255) gggCGATCCTCCCGACCCCCGTTG‑CTATCCCC‑GGAGGAGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCt < 2:221082/250‑1 (MQ=255) cggCCGACCCCCGTTG‑CTATCCCC‑GCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCcgcgcg < 1:313430/249‑1 (MQ=255) cccccccgtggctacccccccagccgcgcgTGCCAGACTGACCCCGCCAATCGCCACGGGGGGATAATCCGCCAGTCGCGCAACATGCCGTGCCAGCTGTGCCAGCCCCTGTGGTGCAGAAGGCATCTGTTTGGTTTGCGGCGGGAACACATGTCTCAGCGGGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTGATGTGTCGAAACGCCCAGCTGCAGGCCTGCCGCGCGGATgg < 2:175441/227‑1 (MQ=255) cGTTG‑CGATCACC‑GGAGGCCCGCGTTCCAGATAGATCCCGCCAATCGCCCCGGTGGGATAACCTGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGTCGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTga < 2:353725/251‑1 (MQ=255) gTTG‑CTATCCCC‑GCAGGCGCGCTTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTgag < 1:222857/251‑1 (MQ=255) tcccc‑GCAGGCGCGCGTGCCAGACGGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGt < 1:121131/247‑1 (MQ=255) gcgccggtcccagcttaactccGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTGCCATATCGTCATGTGTCGAAACGCCCAGCAGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCaaa < 2:226624/231‑1 (MQ=255) gcgggTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATc < 1:210808/247‑1 (MQ=255) cagacagctacagCCAATCGCCAAGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCAAGCGCCTGCGGTGCCGAAGCCATCTGTATGGTTTGGGTCGGTAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGCCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAAGCCTGCCGGGCGGATGGCATTGAGATAGGGGGCTTGCACATCTTACTGcc > 2:404279/13‑251 (MQ=255) cAGACGGATACCGCAAATCGCCTCGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGcc < 1:181369/251‑1 (MQ=255) aGACTGATACCGCCAATCGCCGCGGTGGAATAATACGCCAGTCGCTCAACAGGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGccc < 1:174745/251‑1 (MQ=255) tGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCaa > 2:307711/1‑250 (MQ=255) taTCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCCGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGCTTTCCATATCGTCATGTGTCGACACTCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATAGGTGGCTTGCAAATCTTCCTGCCCCCATTGGACGcctt > 2:70390/2‑249 (MQ=255) gCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGTGAACACATGGCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATGGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATCCGc < 1:242015/251‑1 (MQ=255) gCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGc > 1:70369/1‑251 (MQ=255) ggttggATAAACCGCCGGTGGCTCAACATGCGGTGGCAGCTGTTCCAGACCCTGCGGTGCAGAAGGTATCTGTTTGGTTTGCGTCTGGAACACATGTCTCAGCGCGCTATAAGAGGGGCGAGCTGCCAGCGCGATGTCGATTTCCATATCGTCATGTGGCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGAGCGGTGTATTGCAAATCTTCCGGCCTCAGAGGTACGCCATACGCCTGAt < 2:249029/247‑1 (MQ=255) gggctAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGGTCCAGCCCCTGCGTTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGTACGCCATACGCCTGATGCt < 2:64688/247‑1 (MQ=255) aaTCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGAt < 1:83431/250‑1 (MQ=255) aggcGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAgtcg < 2:170348/248‑4 (MQ=255) aGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAgccg < 2:4909/251‑1 (MQ=255) cgagcAACAGGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCGTCTGTTTGGTTTGCGTCGGGAACACAGGTCCCAGCGCGATATAAGAGTGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCa < 2:342864/247‑1 (MQ=255) aCATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATc > 1:90640/1‑251 (MQ=255) catcccGTGCCAGCGTTTCCAGCCCCTGCGGTGCAGAAGGCATCTGGTGGTTTTGCGTCGGGAACACATGGTCCAGCGCGATATAAGAGGGGCGTGCGTCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGTATGGCATTGAGATCGGTGGCTTGCAAAGCTTCCTGCCCCAAATGGACGCCATACTCCTGATGTTTGATCGCCAGCCGCCAGTAATCg < 2:21968/247‑1 (MQ=255) gCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATaa < 1:293740/250‑1 (MQ=255) cAGCTGTTCCCGCCCCTGCGGTGCCGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGACAGAGCGACGTCGCATTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCTCCAGAAATCGTTGATAAAc > 2:189236/1‑250 (MQ=255) cAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAAc > 2:134726/1‑250 (MQ=255) gctttcccAGCCCCTCCGGTGCAGAAGGAATTTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGGGCTGCCAGCGCGACGTCGATTTCCAGATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCCTCCGGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGAGAAACAAt < 2:287602/245‑1 (MQ=255) tGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCggcggc > 1:23589/1‑251 (MQ=255) cTGTTTGGTTTGCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGAGTTATAGCGGCGGCCCAGCGCAATTg > 2:191376/1‑251 (MQ=255) gtttgCGTCGGGAACACAGGTCTCAGCGCGATATAAGAGGGGCGTGCGGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACCCCCAGCCGCAGGCCTGCCGCGCGGATGGAATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCAc < 1:116791/251‑1 (MQ=255) ttgCGTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACg > 1:366586/1‑250 (MQ=255) gCGTCGGGAACACATGCTTCAGCGCAATATAAGAGGGGCGGGCTGCCAGCGCGACGTCGATTCCCATATCGTAATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGATTGCAAATCTCCCTGCCCCAAATTGACGCCACACTCCTTATGCTTGACCGCCAGCCGCCAGTAATCTTTGATAAACAATCGCGCGTTATAGCGGTGGCCCAGCGCAATTGCCGCCACGAc < 1:29245/250‑1 (MQ=255) gTCGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCATGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATAGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCAGCCACGACATc > 1:198582/1‑251 (MQ=255) cGGGAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATAGCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCg < 1:45887/250‑1 (MQ=255) gggAACACATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGc < 1:253462/251‑1 (MQ=255) acacATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCACATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTcc > 1:280346/1‑251 (MQ=255) acacATGTCTCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTcc < 1:214392/251‑1 (MQ=255) | CCTGCAATTTCCAGCAACTGTGCCGTTGCCAAA‑CGCCAGTCTGCGGCTTGAGTAATGGCGCTGACGACGGCGATACTGCCGACACCCGTTG‑CTATCACC‑GCAGGCGCGCGTGCCAGACTGATACCGCCAATCGCCACGGTGGGATAATCCGCCAGTCGCTCAACATGCCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCC > NC_000913/4193585‑4194061 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |