| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,256,157 | C→T | Q165Q (CAG→CAA) | cyuA ← | putative L‑cysteine desulfidase CyuA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,256,157 | 0 | C | T | 98.6% | 227.1 / ‑4.8 | 70 | coding (495/1311 nt) | cyuA | putative L‑cysteine desulfidase CyuA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (38/31); minor base . (0/1); total (38/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01 | |||||||||||
GATGAAGAGAGATCTTTCGCCAGCAAACCGCGCTCGCACTGTTTTTCCAGCGTCGCGCCAATATGCAGCCCCCACTTACCGCTCAAACCTTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCA > NC_000913/3255912‑3256388 | gATGAAGAGAGATCTTTCGCCAGCAACCCGCGCTCGCACTGTTTTTCCAGCGTCGCGCCAATATGCAGCCCCCCCTTACCGCTCAAACCTTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGt < 2:15527/251‑1 (MQ=255) tGAAGAGAGATCTTTCGCCAGCAAACCGCGCTCGCACTGTTTTTCCAGCGTCGCGCCAATATGCAGCCCCCACTTACCGCTCAAACCTTCCTGCGATAACGCACGATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTa > 1:329504/1‑250 (MQ=255) cAGCAAACCGCGCTCGCACTGTTTTTCCAGCGTCGCGCCAATATGCAGCCCCCACTTACCGCTCAAACCTTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCg < 1:192716/251‑1 (MQ=255) gCAAACCGCGCTCGCACTGTTTTTCCAGCGTCGCGCCAATATGCAGCCCCCACTTACCGCTCAAACCTTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGCTCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTCACCACCACACCATCGTGCGtc > 1:204658/1‑251 (MQ=255) aaCCGCGCTCGCACTGTTTTTCCAGCGTCGCGCCAATATGCAGCCCCCACTTACCGCTCAAACCTTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCg < 1:344762/251‑1 (MQ=255) cgcTCGCACTGTTTTTCCAGCGTCGCGCCAATATGCAGCCCCCACTTACCGCTCAAACCTTCCTGCGCTAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATAGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTACACACCACACCATCGTGCGTCTCGATATg > 1:373470/1‑251 (MQ=255) cGCACTGTTTTTCCAGCGTCGCGCCAATATGCAGCCCCCACTTACCGCTCAAACCTTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGcac < 1:258242/250‑1 (MQ=255) tGTTTTTCCAGCGTCGCGCCAATATGCAGCCCCCACTTACCGCTCAAACCTTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGtt > 1:132558/1‑251 (MQ=255) tttCCAGCGGCGCGCCAATATGCAGCCCCCCCTTACCGCTCAAACCTTCCTGCGATAACGCCCAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGGCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGt < 1:172287/250‑1 (MQ=255) ttCCAGCGTCGCGCCAATATGCAGCCCCCACTTACCGCTCAAACCTTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTa < 1:21308/250‑1 (MQ=255) ttCCAGCGTCGCGCCAATATGCAGCCCCCACTTACCGCTCAAACCTTCCTGCGATAACGCACAATTTAGCTGCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTa < 1:75888/250‑1 (MQ=255) gCGTCGCGCCAATATGCAGCCCCCACTTACCGCTCAAACCTTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCccg < 1:365633/251‑1 (MQ=255) cgcgCCAATATGCAGCCCCCACTTACCGCTCAAACCTTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCccgccg > 1:149922/1‑250 (MQ=255) gcgcCAATATGCAGCCCCCACTTACCGCTCAAACCCTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCcgac > 1:106750/1‑251 (MQ=255) cgcCAATCTGCCGCCCCCACTTACCGCTCAAACCTTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGCATAAAGCGGATCGCCGAAAACGGGACTTCATTGTCGACCTTCAGCATCTCAGCCAGCGTCGCTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGACCTCTGCCACACACCCC‑TGTTGGGTAAACACCACACCATCGTGAGTCTCGATATGCACAATGTTGGTCTGCACGCcgacg > 2:165983/1‑251 (MQ=255) cgcCAATATGCAGCCCCCACTTACCGCTCAAACCTTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCcgacg < 1:80353/251‑1 (MQ=255) tatGCAGCCCCCACTTACCGCTCAAACCTTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTg > 1:165172/1‑251 (MQ=255) tatGCACCCCCCACTTACCGCTCAACCCTTCATGCGCTAACGCACAATTTACCTTCGCGGAATCGAGAATAAAGCGCATCGCCGCAAACGGCACTTCATTGACGCACTTCAGGATCTGAGCCAGCGTCGTTCTGGATAGCACCGTCAGCGGAGCCTCTTGCTCGCCCTCTGCCGCAAACGCC‑TGTTGCGCAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACTATGGTg > 2:107119/1‑251 (MQ=255) cACTTACCGCTCAAACCTTCCTGAGATAACGCACAACTTAGCTTCGCGGAATCGAGAATAAATCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGCAAGCACCGTCAGCGGAGCCTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACAATCGTGCGTCTCGCTATGCACAATGTTGGTATGCCCGCCGACGATGGTGGCACACGccc > 2:238947/1‑250 (MQ=255) aCTTACCGCTCAAACCTTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCACAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGCTATGCACAATGTTGGTCTGCCCGCCGCCGATGGCGCCCCACGCCCAc > 2:43602/1‑251 (MQ=255) tacagCTCAAACCTTCCAGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGCCTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGAAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGCTATGCACAATGTTGGTATGCCCGCCGCCGATGGTGACACACGCCCACTtc > 2:227609/5‑251 (MQ=255) tACCGCTCAAACCTGCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACtt < 1:294314/250‑1 (MQ=255) accgctacaaCCTTCCTTCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGCCGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGTCCCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACCCACGCC‑TGTTTGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTtc < 1:81178/242‑1 (MQ=255) gCTCAAACCTTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCTTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCAc < 1:141495/251‑1 (MQ=255) actttccggctatatcGCACAAAATAGCTTAGCGGAACCCAAAATAAAGAGGATCGCCGCAAACAGGACTACATTGACGAACTTCAGGATCTCTTCCCGCGGCGTTCTGGAAAGCACCGTCAGCGGAGACTTTTGCTCGACCGCTCCCACCCCCGCC‑TGTTGGTTAATCACCACACCAGCGTGCGCCTCCATATGCACAATTTTGTTATGCCCGCCGACGATGGTGACACACGCCAACTTCTCACCGTTcc < 2:401759/236‑1 (MQ=255) ttCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGCTGGTGACACACGCCCACTTCTCACCGTTCCAgc > 2:96294/1‑250 (MQ=255) cTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCACCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACtt > 1:138161/1‑251 (MQ=255) cTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATAGCCGCAACAGGGACTTCATTGACGAACGTCAGAATCTCAGCCCGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACCCGCC‑TGTTGGGCACACACCACACCATCCTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGCCGATAGTGACACACGCCCACTTCTCACCGTTCCAgcatt > 2:354072/1‑247 (MQ=255) cGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCGCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTgg < 1:240403/251‑1 (MQ=255) aTAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGgcg < 1:269284/251‑1 (MQ=255) aaCGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGcgcg > 1:310773/1‑251 (MQ=255) cacaATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTg > 2:144173/1‑249 (MQ=255) aaTTTAGCTTCGCGGAATCGAGACTAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTgaga > 2:368079/1‑249 (MQ=255) tAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATATCAGCCAGCGTCGTTCTTGAAAGCACCGTCAGCGGAGACTCTTACTCGCCCTCTGCCACACACGCC‑TGTTGGGTCAACACCACACCATCGTGCGTCTCGATCTGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGCCTTTGGCGCGAGAGAAGAggc > 1:180919/1‑250 (MQ=255) cTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCCCAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGCCTTTGGCGCGTGAGAAGAGGAttt > 1:199630/1‑251 (MQ=255) tCGCGGAATCGAGCATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGCACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGAAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCACCGACGATGGGGACACACGCCCACTTCTCACCGTTCCCGACTTTGGCGCGTGAGAAGAGGATTTc > 1:339027/1‑250 (MQ=255) cgcgGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCAt > 1:100237/1‑251 (MQ=255) gggAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTGGGCGCGTGAGAAGAGGATTTCATCg < 2:320057/250‑1 (MQ=255) gAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGc > 2:298127/1‑250 (MQ=255) aaTCGAGAATAAAGCGGCTCGCCGCAAATGGGCCTTCATTGTCGAACTTAAGGATCTCAACCAGCGTCCTTCTGGAAAGCACCGACAGCGGAGACTCTTGCACGCCCTCTGCAACACACGCC‑TGTTGGGTAAACAACACACCATCGTGCATCTCGATATGCACCATGTTGGAATGCCCGACGACGATGGTGCCACACGCCCACTTCTCACCGTTCCAGACTTTGACGCGTGAGAAGCGGATTTCATCGCa > 2:338761/1‑250 (MQ=255) aTAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTg > 2:44513/1‑251 (MQ=255) aaaGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACCCCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAATGTTCCTgg < 1:92573/250‑1 (MQ=255) aaGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCCGCCAGCGTCGTTCTGGCAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGAt > 2:203847/1‑251 (MQ=255) cgccgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGATCCTGGATCTTAACgg > 1:324630/1‑251 (MQ=255) cAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGACt > 1:296541/1‑251 (MQ=255) gACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCccg > 1:357166/1‑251 (MQ=255) cTTCATTGACGAACTTCAAGATCTCAGCCAGCGTCGTTCTGGCAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCCCAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTAGCGCGTGAGAAGAGGATTTCCTCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCccgcc > 2:143820/1‑251 (MQ=255) ttCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCccgccg > 1:37238/1‑251 (MQ=255) cATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCCCgccgcc > 2:383847/1‑251 (MQ=255) gtGACGAACTCCAGGAGCCAAGCCAGCGTCGTTCTGGAAAGCACCGCCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑GGTGGGGTAAACACCACCCCATCGTGCGTCTCGATATGCACAATGTTGGTAGGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCACCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCCCGCCGCcag < 1:144173/250‑1 (MQ=255) ccGAACTTCAGGTTCTCAGCCAGCGACGTTCTGGAAAGCTCCGGCAGCGGAGACTCTTGCGCTCCCTCTGCCTCTCACGCC‑TGTTGGGTAAACCCCACACCAGCGTGCGTCGCGATATGCACAATGTGGGTATGCCCGCCGACGATGGTGTCACACGCCCACTTCTCGCCGTCCCAGTCGTTGGCGCGTGAGAAGAGGATTTCAGCGCAAGGTTCCTGGATCTTAACGGAGACTTGCCCCGCCGCcagcag < 1:257582/250‑1 (MQ=255) agccagctgctgtCTGGAAACCACCGTCGGCGGAGCCTCTTGCGCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACCCCACACCATCGGGCGTCTCGATATGCAAAATGTTGGTAGGCCCGCCGACGATGGGGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGTTTCCTGGATCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCaa < 2:347838/239‑1 (MQ=255) cgtcgtCCTGGAAAGCCCCGGCAGCGGGGACTCTTGCTCGCCCTCTGCCACCCACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGTTCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCt < 2:57086/251‑1 (MQ=255) gtcgtTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCACGGTTCCTGGATCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTg > 1:27052/1‑251 (MQ=255) cgtccTGGAAAGCACCGTCAGCGGAGACTCTTGCCCGCCCTCTGCCCCACCCGCC‑TGTTGGGTAAACCCCACCCCTTCGTGCGTCCCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCCCCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTgc < 2:106750/246‑1 (MQ=255) ccccttCAGCGGGGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCCAAATGTTGGAATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGTTTTCATCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCtt < 1:192219/246‑1 (MQ=255) ccccGTCAGCGGAGACCCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACCCCATCGTGCGTCTCGATATGCACAAGGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCTTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCt < 1:36945/239‑1 (MQ=255) cACCGTCAGCGGAGACTCTTGCTCGCACTCTGCCACACACGCC‑TGTTGGGTCAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCCCGCCGCCAGCCGTGCTTTGGCATCGGCAATTGCCTGCGCt > 2:36945/1‑241 (MQ=255) cGTCAGCGGAGCCTCTTGCTCGCCCTTTGCCACCCACGCC‑GGTTGGGTAAACACCACACAATCGTGCGTCTGGATATGCACAATGTTGGAATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGGGAGAAGAGGATTTCATCGCAAGTTTCCTGGATCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCa < 2:143859/251‑1 (MQ=255) cGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTc > 1:153533/1‑250 (MQ=255) cAGCGGAAACTCTTGCTAGCCCTCTGCCACACCCGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCACGCCGCCAGCAGTGCTTTGGCATCGGCACTTGCCTGCGCTGTTGCGTCTTTCAGc > 1:286844/1‑250 (MQ=255) gagtctcttccgcGCCCCCTGCCACACACCCC‑TTTTGGGGAACCACCACACCAACGTGCGTCTCGATATGCACAATGTGGGGAGGCCCGCCGACGATGGGGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCAGCGCAAGGTTCCTGGATCTTACCGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTcc < 2:132558/239‑1 (MQ=255) gaCTCTTGCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTcc > 2:185847/1‑249 (MQ=255) gaCTCTTGCCCTCCCTCTGCCACACACGCC‑TTTTGGTTAACCCCCACACCACCGTGCGTCTCGATATGCACATGGTGGGTATGCCCGCCGACGATGGTGACACACGCCCGCTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGATTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAg < 1:282961/251‑1 (MQ=255) accacgtctcacccTCTGCCCCACGCCCC‑TTTTGGGTAAACCCCACCCCATCGGGCTACTCTATTTGCTAAAGGTTGGTATGCCCGGCGACGAGGGGGACACACGCCCCCGTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCatc < 2:51556/240‑3 (MQ=255) cgtGCTCGCCCTCTGCCACACACTCC‑TGTTGGGTAAACACCACCCCATCGTGCGGCTCGATATGCAAAATGTTGGTATGCCCGCCGGCGATGGTGACACACGCCCACTTCCCACCGTTCCAGACTGTGGCGCGGGAGAATAGGATTTCATCTCAAGGTTCCTGGATCTTACCGGATACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGccc < 1:250270/248‑1 (MQ=255) tGCTCCCCCTCGGCCACACACGCC‑TGTTGGGTAAACCCCACCCCATCGTGCGTCTAGATAGGCAAAATGTTGGTATGCCCGCCGACGATGGGGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCGGGATCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCTCTTCCAGCCCg < 2:288143/249‑1 (MQ=255) gCTCGCCCTCTGCCACACACGCC‑TGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCg > 1:96746/1‑251 (MQ=255) gCTCCCCCTCTTCCACACTCGCC‑TGTTGGGTAAACCCCACCCCATCGTTCGTCTCGATATGCACAATTTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAAAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGc < 2:26256/250‑1 (MQ=255) ccTCTGCCACACACGCCGTG‑TGGTTAAACACCACCCCAGCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACGTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGCCTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACGTCCAGCCCGTCGTTGGCa < 2:248072/251‑1 (MQ=255) | GATGAAGAGAGATCTTTCGCCAGCAAACCGCGCTCGCACTGTTTTTCCAGCGTCGCGCCAATATGCAGCCCCCACTTACCGCTCAAACCTTCCTGCGATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCC‑TGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGAGACTTTCCCCGCCGCCAGCAGTGCTTTGGCATCGGCAATTGCCTGCGCTGTTGCGTCTTTCAGCACTTCCAGCCCGGCGTTGGCA > NC_000913/3255912‑3256388 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |