| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,046,506 | G→T | V523V (GTG→GTT) | yeeJ → | inverse autotransporter adhesin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,046,506 | 0 | G | T | 96.5% | 72.9 / NA | 30 | V523V (GTG→GTT) | yeeJ | inverse autotransporter adhesin |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base T (17/11); total (17/13) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
CAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTGGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCTCGGTATCGTTAAGT‑ACCCAAACATTG‑AACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGG‑AAAGATAATGGTGACGGAAGCTATACCCAGATCCTGACCACAGGAGCGATGTCTG > NC_000913/2046265‑2046750 | cAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCGGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCGGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCa < 1:193050/250‑1 (MQ=255) ggAAATCACTGGTTTCGTCGCTACAAACCAAATATGCACTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGAAAAGTGATCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGTCAAGTGGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACg < 2:322605/250‑1 (MQ=255) gCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCAACGCACTGGAAGCTGCCGGTGGCAAAGTGGACACAACGGGCAAAAATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCt > 1:190017/1‑251 (MQ=255) aaCCAAAGATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGTTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCAATTTTTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCTCGGTAt < 2:206356/251‑1 (MQ=255) aCCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGCAGCTGCCGGTGGCAAAGTGGTAACAACGGGTAAAGCTATTCTGGTTACCTTGCCGGCTTACCGGTTCACCAGTACGCCTGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAACGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTACTCGGTATc > 1:374095/1‑251 (MQ=255) aCCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGACGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCTCGGTATc > 1:396913/1‑251 (MQ=255) cAAATATCCACTGGAAGGCTATAACGACGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTAGTCACCAAGGGTAACGATATTCTGGTTACCCTGCCGGCTTACCGGCTCACCAGTACGCCAGACACCGATCACACCTGGCAGCTTGACGTC‑ACCGCCGAAGATGCCAAAGGAAATTTGTAGAATCGTGAACAGAGCCTGGATGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCTCGGTATCGt > 2:354947/1‑251 (MQ=255) attcccTGAAATGCTATATCGTCGAAGCAACCGCACTGGTAGCTGCCGGGGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGTGTCACCATTACGCAAGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCACGTTGTCGAAGCGTGAACAGAGCATGGTAGTCGTTCCGGCACCTACGCGAAGCCAGAAAG‑CTTCTTCGGTATCGTTAAg < 2:371715/247‑1 (MQ=255) tGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCTCGGTATCGTTAAGT‑ACCCa > 1:10179/1‑250 (MQ=255) gCTATAACGTCGAAGCCACCGCACTGGAAACTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGCTATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGATGTCGTTCAGGCACCAACGCTAAACCAGAAAG‑ATTCCTCCGTATCGTTAAGC‑ACCCCAACATTg > 2:126529/1‑251 (MQ=255) cTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCTCGGTATCGTTAAGT‑ACCCAAACATTg > 1:54957/1‑250 (MQ=255) tataACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCTCGGTATCGTTAAGT‑ACCCAAACATTG‑a > 2:134326/1‑250 (MQ=255) cACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTCCCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ACTCCTCGGTATCGTTAAGT‑ACCCAAACATTG‑AACGCGGATTCCCAtt < 1:93460/251‑1 (MQ=255) gcccTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCCGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTC‑GCCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCCCCTACGCTAAGCCAGAAAG‑ATTCCTCGGTATCGTTAAGT‑ACCCAAACATTG‑AACGCGGATTCCCATTCAAc < 1:354947/248‑1 (MQ=255) cACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCTCGGTATCGTTAAGT‑ACCCAAACATTG‑AACGCGGATTCCCATTCAAcc > 1:24085/1‑251 (MQ=255) cTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCTCGGTATCGTTAAGT‑ACCCAAACATTG‑AACGCGGATTCCCATTCAACCGCCACACTg > 2:116318/1‑251 (MQ=255) cGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCTCGGTATCGTTAAGT‑ACCCAAACATTG‑AACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATgcagc > 1:92461/1‑250 (MQ=255) atatTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCTCGGTATCGTTAAGT‑ACCCAAACATTG‑AACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCt > 1:231653/1‑251 (MQ=255) tCACCAGTACGCAAAAACCCGAAACCACTGGGCCGTTAGAAGCC‑ACCGCGGAAGATGTCAAGGGAAATTTTTCAAATGGTGAACAAGGCATGGTTGTCGTTCAGCCCCCTACGCTAAGCCAAAAAT‑ATTCCTGGGTATCGTTAAGT‑ACCCAAACATTG‑ACCGCGGATTCCAATTAAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCa < 2:83484/250‑1 (MQ=255) aaCCGATAACACCTGGCAGATTGAAGTC‑ACCGCCGAAGCTGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCTCGGTATCGTTAAGT‑ACCCAAACATTG‑AACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGGGTTCAGGAc > 2:368969/1‑250 (MQ=255) ccgggctgtttgactcctccgccgAAGATGAAAAGGGCAATTTGTAGAATCGTGAACAGAGCGTGGTTGTTATTCAGGCCCTTACGCTAAGTCAAAAAG‑ATCCCTCGGTGT‑GTTTAGTTACCAAAACATTG‑AACGCGTTTTCCCTTTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCt < 1:31322/233‑1 (MQ=255) cgggcggatGAAGTCCACCGCCGAAGAGGCAAAAGGAAATTTGTCAAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCAAAGCAAAAAAG‑ATTCCTCGGTATCGTTAAGT‑ACCAAACCATGG‑AACGCGGATTCCCATCCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTg < 1:134326/243‑1 (MQ=255) gagtagAAGCC‑ACGGCCGAAGATGAAAAAGGAAATTTGTCGAATCGTGAACAGAGAATGGTTTTCTTTCAGGCCCCTCCGTTAAGCCAGAAAT‑ATTCCTCGTTATCGTTAAG‑‑ACCCCAACCTTGGACCGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTgg < 1:287229/246‑1 (MQ=255) cGATTGAAGTC‑CCCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCAAAGCCAGAAAG‑ATTCCTCGGTATCTTTAAGT‑ACCCAAACATTG‑AACGCGGATCCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCtctc < 1:801/208‑1 (MQ=255) cGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCTCGGTATCGTTAAGT‑ACCCAAACATTG‑AACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCtctc > 2:801/1‑208 (MQ=255) gAAGATGTCAAAGGCAATTTGTAGAACCGAAAACACCGCATGGTTGTCGTTCAGGAACCTTCGCTAAGCCAGAAAG‑ATTCCTCGGTATCGTTTAGT‑AACCAAACATTG‑AACGAGTATTCCCATTAAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGTAAATCACACTTTTTGAATGGCAAAG‑TAATGGTGaggg > 2:238508/1‑248 (MQ=255) aaaGGAAATTTGGTGAACCGTGACCAGAGCATTTTTGTGGTTCATGCACCACCGCTAAGCCA‑AAAGTATTCCTAGGTATCTTTAAGT‑CCCCAAATATGG‑ACCGCGTATTCCAGTTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCGCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGG‑AAAGATAATGGTGACGGAAGCTATAc < 1:21965/251‑1 (MQ=255) aaTCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCTCGGTATCGTTAAGT‑ACCCAAACATTG‑AACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGG‑CAAGATAATGGGGACGGAAGCTATACCCAGATCCTGACcac > 2:217801/1‑251 (MQ=255) agagCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCTCGGTATCGTTAAGT‑ACCCAAACATTG‑AACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGG‑AAAGATAATGGTGACGGAAGCtata > 2:2029/1‑225 (MQ=255) agagCATGGTGGTCTTTCAGGCCCCTCCGCTAAGCCAGAAAG‑ATCCCTCGGTATCGTTAAGT‑CCCCAAACATTG‑AACGCGGATCCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGG‑AAAGATAATGGTGACGGAAGCtata < 1:2029/225‑1 (MQ=255) tggttgTCGTCCAGCCACCAACGCAAAGCAAAAAAG‑ATTCCCCGGTATCGTAAAGT‑‑CCCAAAAATTGGAACGCGGATCCCCATTCACCCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGG‑AAAGATAATGGTGACGGAAGCTATACCCAGATCCTGACCACAGGAGCGATGTCTg < 2:231653/249‑1 (MQ=255) | CAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTC‑ACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTGGTCGTTCAGGCACCTACGCTAAGCCAGAAAG‑ATTCCTCGGTATCGTTAAGT‑ACCCAAACATTG‑AACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGG‑AAAGATAATGGTGACGGAAGCTATACCCAGATCCTGACCACAGGAGCGATGTCTG > NC_000913/2046265‑2046750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |