Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	579,671	0	T	C	67.3%	59.2 / 35.1	52	intergenic (‑77/‑209)	ybcV/ybcW	DUF1398 domain‑containing protein YbcV/uncharacterized protein YbcW
Reads supporting (aligned to +/- strand):  ref base T (10/6);  new base C (18/15);  total (30/22)
Fisher's exact test for biased strand distribution p-value = 7.60e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.17e-01
Rejected as consensus: Frequency below/above cutoff threshold.

CTTTTATTAACACGGTGTTATCGTTTTCTAACACAATGTGAATATTATCTGTGGCTAGATAGTAAATATAATGTGAGACATTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTTTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGCTTCAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAGTAATATTTTAACCGCTAGATGAAGAGCAAGCGCATGGAGCGACAAAATGAATAAAGAACAATCTGCTGATGATCCCTCCGT  >  NC_000913/579423‑579914                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                    cttttactaatactggggtaaagatttCTAACACAAGGTGAATATTATTTGTGGCTAGATAATACATATCATGAGAGACATTGTGATGTTTTAGTTCAGAATAAAACAATTCACAGTTTAAATATTTTCGCACTTGATATAATATTTATTTAAAAATGGCTACCTGAGCCATTGGTAGAATCTTCAATGTGATACGAAAGAGCGATGTTTGCATTATAGTATTTATCGCTTCATTCTGGATTGACCTCttt                                                                                                                                                                                                                                                   >  2:282502/25‑251 (MQ=255)            acGGTGTTATCGTTTTCTAACACGATGTGAATATTATCTGTGGCTAGATAGTAAATATAATGTGAGACGTTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTttgttg                                                                                                                                                                                                                                        >  2:94036/1‑251 (MQ=255)               gtgtTATCGTTTTCTAACACAATGTGAATATTATCTGTGGCTAGATAGTACATATAATGTGAGACATTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTTTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATCAGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGCTTCAATCTGGTCTGACCTCTTTGTGTTTTGTtgatg                                                                                                                                                                                                                                     >  1:46086/1‑251 (MQ=255)                       gTTTTCTAACACGATGTGAATATTATCTGTGGCTAGATAGTAAATATAATGTGAGACGTTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGt                                                                                                                                                                                                                             >  1:312229/1‑251 (MQ=255)                         tttCTAACACGATGTGAATATTATCTGTGGCGAGATAGTAAATATAATGTGAGACGTTGTGACGTTTTAGGTCAGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTGCTTTAAAAATGGCAACCTGAGCCAGTGGTAAAACCTTCCAGGTGATACGAGGGCGCGTAGTTTGCATTATCGGTTTTATCTTTTCAATCTGGTCTGACCGCCTTGTGTTTTGTTGATGATTTATGTc                                                                                                                                                                                                                            <  2:363574/250‑1 (MQ=255)                                        gAATATTATCTGTGGCTAGATAGTAAATATAATGTGAGACGTTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGCGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCTTTTTCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAATTATTAGGAATGtt                                                                                                                                                                                                            >  1:94536/1‑251 (MQ=255)                                        gAATATTATCTGTGGCTAGATAGTAAATATAATGTGAGACGTTGTGAAGTTTTAGTTCAGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTCAAAAATGGCAACCTGAGCAATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACATCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGTATGtt                                                                                                                                                                                                            >  1:264422/1‑251 (MQ=255)                                          atatTATCTGTGGCTAGATAGGAAATATAATGTGAGACGTTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGtttt                                                                                                                                                                                                          >  1:19839/1‑251 (MQ=255)                                               atCTGTGGCTAGATAGTAAATATAATGTGAGACGTTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCact                                                                                                                                                                                                      <  2:4991/250‑3 (MQ=255)                                                      gCTAGATAGTAAATATAATGTGAGACATTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTTTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTAGCGCTTCAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTa                                                                                                                                                                                              <  1:211433/251‑1 (MQ=255)                                                        tAGATAGTAAATATAATGTGAGACGTTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTAtt                                                                                                                                                                                            >  1:201989/1‑251 (MQ=255)                                                             aGTAAATATAATGTGAGACGTTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTa                                                                                                                                                                                                                    >  2:283015/1‑222 (MQ=255)                                                             aGTAAATATAATGTGAGACGTTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTa                                                                                                                                                                                                                    <  1:283015/222‑1 (MQ=255)                                                                           gagaCGTTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGCATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCaacta                                                                                                                                                                                                                       >  2:66394/1‑202 (MQ=255)                                                                           gagaCGTTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAACTGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTCGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCg                                                                                                                                                                         >  1:268781/1‑251 (MQ=255)                                                                           gagaCGTTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAata                                                                                                                                                                                                                       <  1:66394/205‑1 (MQ=255)                                                                            agaCGTTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCgg                                                                                                                                                                        >  2:165803/1‑251 (MQ=255)                                                                                           ttAGTTCAGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGTCATTGGTAAAACCTGCCATGTGATACGAGGGCTCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTTGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTTAAAGATTTGGAATGTTTTCACTTAATAGTAGTGTTTGCGTAACAGAGTGTGGTCCTGCTGGCATTc                                                                                                                                                          <  2:180148/250‑1 (MQ=255)                                                                                               ttCATAATAAGACAATTCACAGCCTAAATGTTTTCGCACTTGATCGAATATTTCTTTAAACATGGCAACCTGAGACATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTATTGGTTGAGTAACAAAGTGAGGTCCTGATGGAATTCTgg                                                                                                                                                       >  2:351702/1‑249 (MQ=255)                                                                                                 cAGAATAAAACAGTTCAAAGTTTAAGTATTTTCGCACTTGATCGGCTATTTCATTAAAAATGGCAACATGAGCCATTGGTCAAACCTTCCATGTGATTCGAAGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTATGACCTCATTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTCTTGGTTGCGTAACAATGTGCGGTCCTGCTGGCATTCTGGAggg                                                                                                                                                   >  2:392673/1‑251 (MQ=255)                                                                                                          aCAATTCACAGTCTCAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCCACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAc                                                                                                                                          >  2:146390/1‑251 (MQ=255)                                                                                                          aCAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAc                                                                                                                                          <  1:351327/251‑1 (MQ=255)                                                                                                            aaTTCACAGTTTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGCTTCAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCg                                                                                                                                        >  1:36344/1‑251 (MQ=255)                                                                                                               tCACAGTTTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGCTTCAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGAc                                                                                                                                      >  1:186780/1‑250 (MQ=255)                                                                                                                      ttAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGCTTCAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTa                                                                                                                                                                                                                    >  1:91349/1‑165 (MQ=255)                                                                                                                      ttAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGCTTCAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTa                                                                                                                                                                                                                    <  2:91349/165‑1 (MQ=255)                                                                                                                      ctAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAAAATGCGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGCTTTATGTCAAATATTCGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTATGGAGGGAACTACAACCGACAGatgtat                                                                                                                              >  1:181145/2‑251 (MQ=255)                                                                                                                       tAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGTGACATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGCTTCAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGTCATTCTGGAGGGAAATACAACCGACAGatgtatg                                                                                                                             >  2:305032/1‑251 (MQ=255)                                                                                                                         aaTCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTTATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgtatgt                                                                                                                            >  1:250016/1‑250 (MQ=255)                                                                                                                           tctattCGCACTTGGTCGAATCTTTCTTTAAAAATTGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGAGTAGTTTGCATTATCGTTTTTATCGCTTCAATCTGGTCTGACATCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTATTAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGGtgtatgta                                                                                                                           >  2:94068/5‑249 (MQ=255)                                                                                                                               tgcgctcTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGCTTCAATCTGGTCTGACCTCTTTGTGTTTTGTTGAGGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGAGGTATGTAAGGcc                                                                                                                      <  2:41226/244‑1 (MQ=255)                                                                                                                                  tcACTTGATCGAATATTTCTTTAAAAATGGCAACCTGGGCCATTGGTAAAACCATCCATGAGATACGAGGGCGCGTAGTTTGCATTATCGTTTTAATCGCTTCAATCTGGTCTGACCTATTTGTGTTTTGTTGATGATTTATGTCAAATATTGGGAATGTTTTCAATTAATATTATTGGTTGAGTAACAAAGTGCGGTCCTGCTGGCATTCTGGCGGGAAATAAAACCGAAAGTTGCATGTAAGTCCAACg                                                                                                                  >  2:94089/2‑251 (MQ=255)                                                                                                                                         aTCGAATATTTCTTGAAAAATGGAAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGCTTCAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGACCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTACGGCCAACGCGCTCa                                                                                                            >  2:90284/1‑250 (MQ=255)                                                                                                                                             aatctttCTTTAAAAATGGCAACATGCGCCATTGGTAAAACCTTCCATGTGATACGAGAGCGAGTAGTTTGCATTATCGTTTTTATCGTTTAAATCTGGTCTGACCTACTTGAGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaaatct                                                                                                       >  2:155208/5‑248 (MQ=255)                                                                                                                                                atTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGATGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAATCTTc                                                                                                     <  2:94791/250‑1 (MQ=255)                                                                                                                                                  ttCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCCTGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAATCTTCAt                                                                                                   >  2:347991/1‑250 (MQ=255)                                                                                                                                                      ttAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAATCTTCATACa                                                                                                <  1:152820/249‑1 (MQ=255)                                                                                                                                                            agggCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAATCTTCATACAGAAAGAtt                                                                                        <  1:262699/249‑1 (MQ=255)                                                                                                                                                                      gAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGTGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAATCTTCATACAGAAAGATTTGAAGTAata                                                                              <  1:123702/251‑1 (MQ=255)                                                                                                                                                                                    aCCTTCCGTGTGATACGAGGGCGCGTAGTTTACATTATCGTTTTTATCGATTCCATCTGGTCGGACCTCATTGTGTTTTGTTGATGATTTATGTCAAATATTAGGGATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCGGGCCTGCTGGCAATCTGGAGGGAAATACAACCGCCAGATGTATGTAAGGCCACCGTGCTCCAATCTTCATACAGAAAGATTTGAAGTAATATTTTAACCGCt                                                                   >  2:110651/1‑248 (MQ=255)                                                                                                                                                                                           aTGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAATCTTCATACAGAAAGATTTGAAGTAATATTTTAACCGCTAGATGAagag                                                         <  1:94036/251‑1 (MQ=255)                                                                                                                                                                                            tgtgATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGCTTCAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAGTAat                                                                               <  1:233590/228‑1 (MQ=255)                                                                                                                                                                                            tgtgAAACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGCTTCAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAACCCTTCATACAGAAAGATTTGAAGTAat                                                                               >  2:233590/1‑228 (MQ=255)                                                                                                                                                                                               gATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAATCAGGTCTGACCTCCTTGTGTTTTGTTGTTGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAATCTTCATACAGAAAGATTTGAAGTAATATTTTAACCGCTAGATGAAGAGCa                                                       >  1:383800/1‑249 (MQ=255)                                                                                                                                                                                                       ggctcgTAGTTTGCATTATCGTTTTTATCGTTTCAATCTGTGCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAATCTTCATACAGAAAGATTTGAAGTAATATTTTAACCGCTAGATGAATAGCAAGCGCATGGa                                             <  1:99402/247‑1 (MQ=255)                                                                                                                                                                                                          gcgTAGTTTGCATTATCTTTTTTATCGTTTCAATCTGGTCTGACCTCCGTGTGTATTGTTGATGATTTATGTCAAATAGTAGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAATCTTCATACAGAAAGATTTGAAGTAATATTTTAACCGCTAGATGAAGAGCAAGCGCATGGAGCg                                          <  2:311087/251‑1 (MQ=255)                                                                                                                                                                                                              aGTTTGCATTATCGTTTTTATCGCTTCAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAGTAATATTTTAACCGCTAGATGAAGAGCAAGCGCATGGAGCGACa                                       <  1:303771/250‑1 (MQ=255)                                                                                                                                                                                                               gTTTGCATTATCGTTTTTATCGCTTCAATCTTGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAGTAATATTTTAACCGCTAGATGAAGAGCAAGCGCATGGAGCGACaaa                                     <  1:362775/251‑1 (MQ=255)                                                                                                                                                                                                                        aTCGTTTTTATCGTTTCAATCTGGTCTGACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGACTGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAATCTTCATACAGAAAGATTTGAAGTAATATTTTAACCGCTAGATGAAGAGCAAGCGCATGGAGCGACAAAATGAATaa                             >  1:62937/1‑250 (MQ=255)                                                                                                                                                                                                                               ttATCGCTTCAATCTGGTCTGTCCTCGTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAGTAATATTTTAACCGCTAGATGAAGAGCACGCGCATGGAGCGACAAAATGAATAAAGAACaa                      <  1:222862/250‑1 (MQ=255)                                                                                                                                                                                                                                   cGCTTCAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAGTAATATTTTAACCGCTAGATGAAGAGCAAGCGCATGGAGCGACAAAATGAATAAAGAACAATctgc                 >  1:37885/1‑251 (MQ=255)                                                                                                                                                                                                                                                   gACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTTCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAATCTTCATACAGAAAGATTTGAAGTAATATTTTAACCGCTAGATGAAGAGCAAGCGCATGGAGCGACAAAATGAATAAAGAACAATCTGCTGATGATCCCTCCGt  <  2:201989/250‑1 (MQ=255)                                                                                                                                                                                                                                                   gACCTCCTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCACTTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAATCTTCATACAGAAAGATTTGAAGTAATATTTTAACCGCTAGATGAAGAGCAAGCGCATGGAGCGACAAAATGAATAAAGAACAATCTGCTGATGAGCCCTCCg   <  2:238765/249‑1 (MQ=255)                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                    CTTTTATTAACACGGTGTTATCGTTTTCTAACACAATGTGAATATTATCTGTGGCTAGATAGTAAATATAATGTGAGACATTGTGACGTTTTAGTTCAGAATAAAACAATTCACAGTTTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGGCAACCTGAGCCATTGGTAAAACCTTCCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGCTTCAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAGTAATATTTTAACCGCTAGATGAAGAGCAAGCGCATGGAGCGACAAAATGAATAAAGAACAATCTGCTGATGATCCCTCCGT  >  NC_000913/579423‑579914

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑