Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	578,831	0	T	C	47.6%	‑5.6 / 59.3	43	T21T (ACA→ACG)	borD	prophage lipoprotein BorD
Reads supporting (aligned to +/- strand):  ref base T (10/12);  new base C (8/12);  total (19/24)
Fisher's exact test for biased strand distribution p-value = 7.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.00e-01
Rejected as consensus: E-value score below prediction cutoff.
Rejected as consensus: Frequency below/above cutoff threshold.

GATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTG  >  NC_000913/578582‑579073                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                   gaggggCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATg                                                                                                                                                                                                                                                   <  2:86327/248‑1 (MQ=255)            cATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTACAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGAGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGCACAGTAAACGTCTGTTGAGc                                                                                                                                                                                                                                         >  2:285966/1‑250 (MQ=255)            cATGCAATTATTTTGAGAAATACACACGCGCTGCCAGCGGAGTAGAAATGCCGAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCGGGGGGTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGTCAGTTGTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGca                                                                                                                                                                                                                                        <  1:273839/251‑1 (MQ=255)               gCAATTATTTTGAGCAATACACACGCGCTTCCATCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGcaca                                                                                                                                                                                                                                      <  2:315289/250‑1 (MQ=255)               gCAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTGTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACAt                                                                                                                                                                                                                                     <  1:45285/251‑1 (MQ=255)               gCAATTATTTTGAGAAAAACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTGGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTTTTTTGAACAGTAAACGGCTGTTGAGcaca                                                                                                                                                                                                                                      <  2:236941/250‑1 (MQ=255)                cAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATc                                                                                                                                                                                                                                    <  2:341607/251‑1 (MQ=255)                cAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATc                                                                                                                                                                                                                                    >  1:99849/1‑251 (MQ=255)                              aaTACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCACTTCCAGACACGAAGACATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACCGTACACGTCTGTTGAGCACATCCTGTACTAAGCAgg                                                                                                                                                                                                                      >  2:147874/1‑251 (MQ=255)                                          cTTCCAGCGGAGTTTAAACGGCCAACGCAGTAAAACCGGGCAATCCTTTTCCGACTGTTTACCGGGCTTCAGTTTTAACAACCTTTTCTGCGCCCCCACACATTTTAGCTGCATCGACAGTTTTCTTCTGCCAACTTCCAGACACGAAGAAATGATGGGTGATGGTTTCCTTTAGTGCTATTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTATTACGCAGGGCCCGCGCAga                                                                                                                                                                                                           >  2:185825/1‑249 (MQ=255)                                                gCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGt                                                                                                                                                                                                    <  2:157070/251‑1 (MQ=255)                                                  ggaggaTAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGTGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGt                                                                                                                                                                                                    >  1:220940/1‑249 (MQ=255)                                                  ggAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAg                                                                                                                                                                                                  <  2:116995/251‑1 (MQ=255)                                                          aaTGCCTAACGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTGTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCAtttttt                                                                                                                                                                                          <  2:58571/251‑1 (MQ=255)                                                             gCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCa                                                                                                                                                                                       <  1:314973/251‑1 (MQ=255)                                                               cTAAAGTAATAAAACCGAGCAATCCATTTACGCCTGTTTGCTGGGTTTATGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCAAGAAACGACGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTCAATGTCTGTTGAGCGCAGCCTGTAATAAGCAGGGCCAGCGCAGATGCGAGTAGCATTTTTTTCATg                                                                                                                                                                                     >  2:213797/1‑251 (MQ=255)                                                                 aaaGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCATCGCAGTTTCGAGTAGCATTTTTTTCATGgt                                                                                                                                                                                   <  1:110003/251‑1 (MQ=255)                                                                       ataaaaccggataaTCCGTTTTCGAATGATTGCTGGTTGTATTTTTTAACAACATTTTCCGCGCCTCCACAAAGTTTTGCTGCATCGACAGTTTTCTTCTGCCCAATTCCTGAAACGAAGAAATGATGGTTGATGGTATCCTTTGGTGCTACTGGTGCCGGTTTGGTTTGAACAGTAAACGACTGTTGAGCAGTTCATGTAATAAGCAGGGCCAGCGTAGTAGGGAGTTGCATGTATTTCATGGTGTTAtt                                                                                                                                                                             <  2:333746/239‑1 (MQ=255)                                                                            aCCGAGCAATCCATTTACGACTGTTTGCTGGGTTTCTGTTTTCACAACATTTTCTGCGCCGCCAAAAATTTTAGCTGCATCGACCGTTTTCTTCTGCCCAATTCAAGAAACGACGAAATGATGGGTCATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAAAGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGCAGCATTTTTTTCATGGGGTTATTCCCg                                                                                                                                                                         >  1:151601/1‑250 (MQ=255)                                                                                              gAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGCAGTTCGc                                                                                                                                                       >  2:46868/1‑250 (MQ=255)                                                                                                         gtgTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAAGTTTAGCTGCATCGACAGTTTTCTGCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTTCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCGGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTAt                                                                                                                                             <  1:261114/247‑1 (MQ=255)                                                                                                         gggTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTAtgt                                                                                                                                           >  2:349827/1‑251 (MQ=255)                                                                                                                       acaacaTTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTaaac                                                                                                                             >  1:177357/1‑251 (MQ=255)                                                                                                                                      ccgccACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATg                                                                                                              >  1:294974/1‑251 (MQ=255)                                                                                                                                        gccACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAg                                                                                                            <  1:12910/251‑1 (MQ=255)                                                                                                                                        gccACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGcc                                                                                                                                                                                                                   >  2:3226/1‑148 (MQ=255)                                                                                                                                        gccACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGcc                                                                                                                                                                                                                   <  1:3226/148‑1 (MQ=255)                                                                                                                                                        gCATCGACAGTTTTCTTCTGCCCAATGCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAACCCCTAAACAATGAGTTGAAATTGCATAtt                                                                                             <  2:127358/250‑1 (MQ=255)                                                                                                                                                               cAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAGATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAatat                                                                                     <  1:147874/251‑1 (MQ=255)                                                                                                                                                               cAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACGGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTGCATAGTGTTAatat                                                                                     <  2:212717/251‑1 (MQ=255)                                                                                                                                                                   tttCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAAtatttat                                                                                 >  1:300433/1‑251 (MQ=255)                                                                                                                                                                     tcttctGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAAtatttatt                                                                                <  1:293765/250‑1 (MQ=255)                                                                                                                                                                              cAATTCCAGAAACGAAGCAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAAAAGTAAGTGTCTGTTGAGCACATCATGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCCTGGTGTTATTCCCGATGATTTTTGAGGTTCGCAGAATc                                                                                                                                                 >  2:399609/1‑176 (MQ=255)                                                                                                                                                                              cAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTGGTTTTGAACAGTAAATGTCTGTTGATCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATc                                                                                                                                                 <  1:399609/176‑1 (MQ=255)                                                                                                                                                                                   ccAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGt                                                                  <  1:73555/250‑1 (MQ=255)                                                                                                                                                                                    cAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGTCAGGTGc                                                                <  2:177357/251‑1 (MQ=255)                                                                                                                                                                                             agaaATGATGGGTGATGGTTTCCTTTGGTTCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGTGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGa                                                                                                                                                              <  2:326705/148‑1 (MQ=255)                                                                                                                                                                                             agaaATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGa                                                                                                                                                              >  1:326705/1‑148 (MQ=255)                                                                                                                                                                                                 atgatgGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACCTCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTaaacaaac                                                                                                                         >  2:64820/1‑181 (MQ=255)                                                                                                                                                                                                 atgatgGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTaaacaaac                                                                                                                         <  1:64820/181‑1 (MQ=255)                                                                                                                                                                                                                           cTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCCGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGTCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCcac                         >  2:155188/1‑251 (MQ=255)                                                                                                                                                                                                                                        tatgtattGAAAAGTAAATGTATGTTAAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTCTTACCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAAAAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGACAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACgggg            >  2:267021/7‑251 (MQ=255)                                                                                                                                                                                                                                                  aCAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGTCAGGTGCGATGAATCGTCATTGTATTCCGGGATTAACTATGTCCACAGCCCTGACGGGGCACTTCTCTg  >  2:94741/1‑251 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                   GATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTG  >  NC_000913/578582‑579073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑