Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913578,8110TG47.8% 8.6 / 52.6 46Q28P (CAG→CCG) borDprophage lipoprotein BorD
Reads supporting (aligned to +/- strand):  ref base T (10/14);  new base G (9/13);  total (19/27)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.77e-01
Rejected as consensus: E-value score below prediction cutoff.
Rejected as consensus: Frequency below/above cutoff threshold.

TAGAGCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCAC  >  NC_000913/578566‑579050
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                               
aagagcgtaCCAGATCGATGGGCAACTCATGCAATTATTTGGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCTTAAAGTAATAAAACCGATCAATCCATTTACGAATGTTTGCTGGGTTTCTGTGTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCtgtttg                                                                                                                                                                                                                                            <  2:334592/243‑1 (MQ=255)
 agagCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCtgtttgt                                                                                                                                                                                                                                           >  1:86327/1‑251 (MQ=255)
        aCCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAAc                                                                                                                                                                                                                                    >  2:293765/1‑251 (MQ=255)
             gcgactccgatattcaggCAATTATTTTGAGCAATGCTCACTCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGCGCAATCCATTTTCGAATTTTTTCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCAGCGACAGTTGTCTTCTGCCCAATTCCAGAAACGAATAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGACGGTTTGCTTTGACCAGTaa                                                                                                                                                                                                                               <  2:189424/234‑1 (MQ=255)
             atCGATGGGCAACTTATGCAATTATTTTGAGCAATACACACGCGCTGCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCGGGTTTTCGGTTTGAACAACATTTTCTTCGCCGCCACAAAGTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGAGGGGCGATGGTTTCCTTTGGTGCTACGGCTGTCTGTTTGTTTTGAACAGTa                                                                                                                                                                                                                                <  2:40816/250‑1 (MQ=255)
             atCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGGTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTaa                                                                                                                                                                                                                               <  1:131642/251‑1 (MQ=255)
                gaggggCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATg                                                                                                                                                                                                                            <  2:86327/248‑1 (MQ=255)
                          tCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCCATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGCAACGACGAAATGATGGGTGATGGTTTCCTTTGGAGCTACTGCTGCCGGTTTGTTTTGAACAGTaa                                                                                                                                                                                                                               >  1:189424/1‑238 (MQ=255)
                           cATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTACAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGAGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGCACAGTAAACGTCTGTTGAGc                                                                                                                                                                                                                  >  2:285966/1‑250 (MQ=255)
                           cATGCAATTATTTTGAGAAATACACACGCGCTGCCAGCGGAGTAGAAATGCCGAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCGGGGGGTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGTCAGTTGTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGca                                                                                                                                                                                                                 <  1:273839/251‑1 (MQ=255)
                              gCAATTATTTTGAGCAATACACACGCGCTTCCATCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGcaca                                                                                                                                                                                                               <  2:315289/250‑1 (MQ=255)
                              gCAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTGTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACAt                                                                                                                                                                                                              <  1:45285/251‑1 (MQ=255)
                              gCAATTATTTTGAGAAAAACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTGGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTTTTTTGAACAGTAAACGGCTGTTGAGcaca                                                                                                                                                                                                               <  2:236941/250‑1 (MQ=255)
                               cAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATc                                                                                                                                                                                                             <  2:341607/251‑1 (MQ=255)
                               cAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATc                                                                                                                                                                                                             >  1:99849/1‑251 (MQ=255)
                                             aaTACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCACTTCCAGACACGAAGACATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACCGTACACGTCTGTTGAGCACATCCTGTACTAAGCAgg                                                                                                                                                                                               >  2:147874/1‑251 (MQ=255)
                                                         cTTCCAGCGGAGTTTAAACGGCCAACGCAGTAAAACCGGGCAATCCTTTTCCGACTGTTTACCGGGCTTCAGTTTTAACAACCTTTTCTGCGCCCCCACACATTTTAGCTGCATCGACAGTTTTCTTCTGCCAACTTCCAGACACGAAGAAATGATGGGTGATGGTTTCCTTTAGTGCTATTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTATTACGCAGGGCCCGCGCAga                                                                                                                                                                                    >  2:185825/1‑249 (MQ=255)
                                                               gCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGt                                                                                                                                                                             <  2:157070/251‑1 (MQ=255)
                                                                 ggaggaTAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGTGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGt                                                                                                                                                                             >  1:220940/1‑249 (MQ=255)
                                                                 ggAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAg                                                                                                                                                                           <  2:116995/251‑1 (MQ=255)
                                                                         aaTGCCTAACGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTGTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCAtttttt                                                                                                                                                                   <  2:58571/251‑1 (MQ=255)
                                                                            gCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCa                                                                                                                                                                <  1:314973/251‑1 (MQ=255)
                                                                              cTAAAGTAATAAAACCGAGCAATCCATTTACGCCTGTTTGCTGGGTTTATGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCAAGAAACGACGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTCAATGTCTGTTGAGCGCAGCCTGTAATAAGCAGGGCCAGCGCAGATGCGAGTAGCATTTTTTTCATg                                                                                                                                                              >  2:213797/1‑251 (MQ=255)
                                                                                aaaGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCATCGCAGTTTCGAGTAGCATTTTTTTCATGgt                                                                                                                                                            <  1:110003/251‑1 (MQ=255)
                                                                                      ataaaaccggataaTCCGTTTTCGAATGATTGCTGGTTGTATTTTTTAACAACATTTTCCGCGCCTCCACAAAGTTTTGCTGCATCGACAGTTTTCTTCTGCCCAATTCCTGAAACGAAGAAATGATGGTTGATGGTATCCTTTGGTGCTACTGGTGCCGGTTTGGTTTGAACAGTAAACGACTGTTGAGCAGTTCATGTAATAAGCAGGGCCAGCGTAGTAGGGAGTTGCATGTATTTCATGGTGTTAtt                                                                                                                                                      <  2:333746/239‑1 (MQ=255)
                                                                                           aCCGAGCAATCCATTTACGACTGTTTGCTGGGTTTCTGTTTTCACAACATTTTCTGCGCCGCCAAAAATTTTAGCTGCATCGACCGTTTTCTTCTGCCCAATTCAAGAAACGACGAAATGATGGGTCATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAAAGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGCAGCATTTTTTTCATGGGGTTATTCCCg                                                                                                                                                  >  1:151601/1‑250 (MQ=255)
                                                                                                             gAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGCAGTTCGc                                                                                                                                >  2:46868/1‑250 (MQ=255)
                                                                                                                        gtgTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAAGTTTAGCTGCATCGACAGTTTTCTGCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTTCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCGGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTAt                                                                                                                      <  1:261114/247‑1 (MQ=255)
                                                                                                                        gggTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTAtgt                                                                                                                    >  2:349827/1‑251 (MQ=255)
                                                                                                                                      acaacaTTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTaaac                                                                                                      >  1:177357/1‑251 (MQ=255)
                                                                                                                                                     ccgccACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATg                                                                                       >  1:294974/1‑251 (MQ=255)
                                                                                                                                                       gccACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAg                                                                                     <  1:12910/251‑1 (MQ=255)
                                                                                                                                                       gccACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGcc                                                                                                                                                                                            >  2:3226/1‑148 (MQ=255)
                                                                                                                                                       gccACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGcc                                                                                                                                                                                            <  1:3226/148‑1 (MQ=255)
                                                                                                                                                                       gCATCGACAGTTTTCTTCTGCCCAATGCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAACCCCTAAACAATGAGTTGAAATTGCATAtt                                                                      <  2:127358/250‑1 (MQ=255)
                                                                                                                                                                              cAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAGATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAatat                                                              <  1:147874/251‑1 (MQ=255)
                                                                                                                                                                              cAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACGGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTGCATAGTGTTAatat                                                              <  2:212717/251‑1 (MQ=255)
                                                                                                                                                                                  tttCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAAtatttat                                                          >  1:300433/1‑251 (MQ=255)
                                                                                                                                                                                    tcttctGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAAtatttatt                                                         <  1:293765/250‑1 (MQ=255)
                                                                                                                                                                                             cAATTCCAGAAACGAAGCAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAAAAGTAAGTGTCTGTTGAGCACATCATGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCCTGGTGTTATTCCCGATGATTTTTGAGGTTCGCAGAATc                                                                                                                          >  2:399609/1‑176 (MQ=255)
                                                                                                                                                                                             cAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTGGTTTTGAACAGTAAATGTCTGTTGATCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATc                                                                                                                          <  1:399609/176‑1 (MQ=255)
                                                                                                                                                                                                  ccAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGt                                           <  1:73555/250‑1 (MQ=255)
                                                                                                                                                                                                   cAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGTCAGGTGc                                         <  2:177357/251‑1 (MQ=255)
                                                                                                                                                                                                            agaaATGATGGGTGATGGTTTCCTTTGGTTCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGTGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGa                                                                                                                                       <  2:326705/148‑1 (MQ=255)
                                                                                                                                                                                                            agaaATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGa                                                                                                                                       >  1:326705/1‑148 (MQ=255)
                                                                                                                                                                                                                atgatgGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACCTCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTaaacaaac                                                                                                  >  2:64820/1‑181 (MQ=255)
                                                                                                                                                                                                                atgatgGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTaaacaaac                                                                                                  <  1:64820/181‑1 (MQ=255)
                                                                                                                                                                                                                                          cTACTGCTGCCGGTTTGTTTTGAACAGTAAACGTCTGTTGAGCACATCCTGTAATAAGCCGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGTCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCcac  >  2:155188/1‑251 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                               
TAGAGCTGACCATATCGATGGGCAACTCATGCAATTATTTTGAGCAATACACACGCGCTTCCAGCGGAGTATAAATGCCTAAAGTAATAAAACCGAGCAATCCATTTACGAATGTTTGCTGGGTTTCTGTTTTAACAACATTTTCTGCGCCGCCACAAATTTTAGCTGCATCGACAGTTTTCTTCTGCCCAATTCCAGAAACGAAGAAATGATGGGTGATGGTTTCCTTTGGTGCTACTGCTGTCTGTTTGTTTTGAACAGTAAATGTCTGTTGAGCACATCCTGTAATAAGCAGGGCCAGCGCAGTAGCGAGTAGCATTTTTTTCATGGTGTTATTCCCGATGCTTTTTGAAGTTCGCAGAATCGTATGTGTAGAAAATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCAC  >  NC_000913/578566‑579050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑