Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,542,042 IS1 (+) +8 bp coding (6‑13/597 nt) fimE → regulator for fimA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3583428 =NA (NA)25 (0.660) 22/486 0.6 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 4542049 0 (0.000)coding (13/597 nt) fimE regulator for fimA
* ? NC_000913 = 3584195NA (NA)53 (1.400) 46/488 0.1 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 4542042 = 0 (0.000)coding (6/597 nt) fimE regulator for fimA

TTTTAAGCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCA  >  NC_000913/4541802‑4542299
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                          
gacgtgttgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaattcgctgtctttctcaaaatcgggggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggaggcagtaccTAaacgtctt                                                                                                                                                                                                                                                          <  2:371076‑M2/10‑3 (MQ=255)
   tAAGCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgat                                                                                                                                                                                                                                                      <  1:283994‑M2/251‑7 (MQ=255)
      gtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTa                                                                                                                                                                                                                                                   <  1:47417‑M2/17‑1 (MQ=255)
        gatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctggcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTAcc                                                                                                                                                                                                                                                 <  1:76497‑M2/19‑1 (MQ=255)
           atggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaaggcatcgggcattagctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCgg                                                                                                                                                                                                                                               <  2:196064‑M2/21‑1 (MQ=255)
             ggatgacggatggaaggccgctgtatgaagcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgacttgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaacaactatcactaagttggtgtaattaccTAAACGTCGTTATCTTAccggaa                                                                                                                                                                                                                                             >  2:98182‑M2/228‑248 (MQ=255)
                               tgctgtaagaatccagcctgaagagaaagctgcacgtactcagcaagcgatatacgcagcgaattgagcggcataacatgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaataggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactctcaataagttggagtcattaccTAAacatcgttatattaccggtagagcatttccgtccatgat                                                                                                                                                                                                                          >  2:51955‑M2/210‑232 (MQ=255)
                               tCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatg                                                                                                                                                                                                                           <  1:179608‑M2/250‑34 (MQ=255)
                                gctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAaag                                                                                                                                                                                                                                          <  1:161295‑M2/26‑1 (MQ=255)
                                gctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCatgatg                                                                                                                                                                                                                         >  1:401473‑M2/209‑251 (MQ=255)
                                gctgtatgaatcccgcctgaagagaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggaggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAaag                                                                                                                                                                                                                                          >  2:161295‑M2/209‑234 (MQ=255)
                                  aTTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATTTCTCAGTTAGGAGTACTACTATTGTGATTAAACGTCggtgatgctgccaacttactgatttagtgtatg                                                                                                                                                                                                                           >  1:239138‑M2/1‑214 (MQ=255)
                                       tataTTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtt                                                                                                                                                                                                                   >  1:220691‑M2/1‑209 (MQ=255)
                                         atcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGtt                                                                                                                                                                                                                >  1:324869‑M2/200‑251 (MQ=255)
                                                 tgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTTTACgg                                                                                                                                                                                                        >  1:116804‑M2/192‑251 (MQ=255)
                                                  gaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACgg                                                                                                                                                                                                        <  1:351961‑M2/60‑1 (MQ=255)
                                                    agggaaagccgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcaccgggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcagcgggcattatctgatcataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGTTTTGTTACGGGGc                                                                                                                                                                                                     <  2:391469‑M2/63‑1 (MQ=255)
                                                         cagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggcgctgcatgacaaagtcatcgggcattatctgaacataacacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACgg                                                                                                                                                                                                >  2:9140‑M2/184‑251 (MQ=255)
                                                         aagctgcacgtaaaaagcaagcgagatacgcagcgaattgagcggcataacctgaatatgaggcagcacctggcacggctgagacggaagtcgctgtcgttctcaaactcggtggagctgcatgacaaagtcatcgggcattatctggacataaaacactatcaataagttggagtcattaacTCAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAAGGGGCCACgg                                                                                                                                                                                                >  1:76415‑M2/184‑251 (MQ=255)
                                                           gctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGa                                                                                                                                                                                              <  1:269451‑M2/70‑1 (MQ=255)
                                                            ctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACggg                                                                                                                                                                                               >  1:68827‑M2/181‑249 (MQ=255)
                                                                acgtaatcagcaagtgaactacgcagacaattgagcggcataacctgaatctgaggcagcacctggcccggctgggacggaagtcgctgtcgttctcaacatcggcggagctgcacgacaaagtcatcgcgaattctctgaacataaaacactataaataagctggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTTTACGGGGCCACGGGCGCCa                                                                                                                                                                                          >  2:170628‑M2/177‑250 (MQ=255)
                                                                 cgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggccgcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCaga                                                                                                                                                                                        <  1:64428‑M2/76‑1 (MQ=255)
                                                                 cgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcaccttgcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTGCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCaga                                                                                                                                                                                        <  1:363348‑M2/76‑1 (MQ=255)
                                                                  aTGTTGTTACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCCCTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTTCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttcctgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc                                                                                                                                                                                       >  2:305842‑M2/1‑182 (MQ=255)
                                                                       gtCACATCAGTGATATTTTATTTTTGTATGATCTTTAATGTAATTGACTGATAGCCACATCACTCCGGGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc                                                                                                                                                                                   <  2:198022‑M2/250‑74 (MQ=255)
                                                                       cagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGatta                                                                                                                                                                                   <  1:331370‑M2/81‑1 (MQ=255)
                                                                        agcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGCGattatt                                                                                                                                                                                 >  1:147618‑M2/169‑251 (MQ=255)
                                                                         gcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTg                                                                                                                                                                                <  1:73302‑M2/84‑1 (MQ=255)
                                                                            agcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggcgctgcatgacaaagtcatcgggaattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAAagggagccaaagaataatcgct                                                                                                                                                                             >  1:23381‑M2/165‑242 (MQ=255)
                                                                                  atacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCt                                                                                                                                                                       <  1:382560‑M2/93‑1 (MQ=255)
                                                                                       cagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGATTGTTACGGGGCAACGGGAGCAAGAGGTTTTTGTCTTTTTCtgtttg                                                                                                                                                                  >  2:116517‑M2/154‑249 (MQ=255)
                                                                                             attgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATc                                                                                                                                                            <  2:339719‑M2/104‑1 (MQ=255)
                                                                                                 agcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGc                                                                                                                                                         >  1:37840‑M2/144‑250 (MQ=255)
                                                                                                    ggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAg                                                                                                                                                                                             <  1:400808‑M2/71‑1 (MQ=255)
                                                                                                     gtattTAACGTAATTAACTGATAGCCAAATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgttttagtgtatgatggtgtttttgaggtgctacagtgtcttctgtttctatcagctgtccctcctgttcagatactgacgggg                                                                                                                                                    <  2:339593‑M2/250‑105 (MQ=255)
                                                                                                      cataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaagcggttgagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGa                                                                                                                                                   <  2:183146‑M2/113‑1 (MQ=255)
                                                                                                              gTAATTGACTGCTAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTCCTTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgcccacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttca                                                                                                                                                                 <  2:164450‑M2/229‑92 (MQ=255)
                                                                                                              gTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttca                                                                                                                                                                 >  1:164450‑M2/1‑138 (MQ=255)
                                                                                                                    gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGCCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAg                                                                                                                                         <  1:214619‑M2/123‑1 (MQ=255)
                                                                                                                    gACTGATAGCCACATCACTCATTGTGTTGTTATCTTGTTATCTAGTTGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATTTCTCAGGTAGGAGTACTACTATTGTGAGTAAACGTCtgtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctacagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggc                                                                                                                                      >  2:113487‑M2/1‑132 (MQ=255)
                                                                                                                       gcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTg                                                                                                                                  <  1:108660‑M2/130‑1 (MQ=255)
                                                                                                                         agcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCt                                                                                                                                <  2:324869‑M2/132‑1 (MQ=255)
                                                                                                                         aTAGCCACCTCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTCCTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggttcgtaacggcaaaagc                                                                                                                                >  1:12611‑M2/1‑127 (MQ=255)
                                                                                                                         aTAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagc                                                                                                                                <  1:212038‑M2/251‑125 (MQ=255)
                                                                                                                         aTAGCCACATCACTCCGAGTGTGGCTATCTTTTTATCTATTGCGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATCTCTCAGTTAGGAGTACTCCTATTGTGCGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttccgctactgacggggtggtgcgtaacggcacaagc                                                                                                                                <  2:387043‑M2/251‑125 (MQ=255)
                                                                                                                            gCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcacc                                                                                                                             >  2:212038‑M2/1‑124 (MQ=255)
                                                                                                                            acctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGGTGCGGATTTGTGAACTGCTTg                                                                                                                              >  1:314491‑M2/117‑250 (MQ=255)
                                                                                                                            acctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGGATTAGTGAACTGCTTg                                                                                                                              >  1:151447‑M2/117‑250 (MQ=255)
                                                                                                                                    cggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGTAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGATCTGCTTGATCTGCAtt                                                                                                                     <  1:343700‑M2/143‑1 (MQ=255)
                                                                                                                                       ccGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatc                                                                                                                   >  2:188503‑M2/1‑113 (MQ=255)
                                                                                                                                         gggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTTCATTATc                                                                                                                  >  1:373285‑M2/104‑249 (MQ=255)
                                                                                                                                         gggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATc                                                                                                                  <  1:241776‑M2/146‑1 (MQ=255)
                                                                                                                                            acggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGgac                                                                                                             <  1:119300‑M2/151‑1 (MQ=255)
                                                                                                                                            acggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcagtatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTGATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGgac                                                                                                             <  1:158518‑M2/151‑1 (MQ=255)
                                                                                                                                             gtgGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgct                                                                                                             >  1:294693‑M2/1‑107 (MQ=255)
                                                                                                                                              ggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAAAGGGAGCCAGCGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAAATGCTTGATCTGCATTATCAGgacct                                                                                                           >  1:367307‑M2/99‑251 (MQ=255)
                                                                                                                                                      tttttATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGCGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctc                                                                                                   <  1:371076‑M2/251‑154 (MQ=255)
                                                                                                                                                        gtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTa                                                                                                   <  2:362399‑M2/161‑1 (MQ=255)
                                                                                                                                                          cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATg                                                                                                <  1:135066‑M2/164‑1 (MQ=255)
                                                                                                                                                                     ctcatttTGAACGATTGAGGTTTCCTATAGGTATTCATTCAACTATATCTCAGTTAGGAGTACTACTATTGTGAGTAACCGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggaggcgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaacc                                                                                    <  2:357219‑M2/248‑169 (MQ=255)
                                                                                                                                                                     cTAATTTTGACCGATTGAGGTTTCCTATAGGAATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttattgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctactgttcagctcctgacggggaggtgcgtaacggccaaagcaccgccggacttcagcgctatctctgctctcactgccgtaaaa                                                                                     <  2:357216‑M2/250‑168 (MQ=255)
                                                                                                                                                                             gACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTCAACGTCgacgatgctgccaacttactgatttagtgtatgatggtgtttttgcggtgctccagtggcttctctttctatcatctgtccctcctgttcagctactgacggggtggtacgtcacggcaaacgcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatgtcaac                                                                            <  1:207275‑M2/251‑177 (MQ=255)
                                                                                                                                                                                 catgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGAc                                                                        <  2:116804‑M2/188‑1 (MQ=255)
                                                                                                                                                                                          ttCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTCCTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcactt                                                                <  1:94804‑M2/250‑189 (MQ=255)
                                                                                                                                                                                               cgggcattatctgaacagaaaacactatcaataagttggagtcattgccTAAACGGCGTTAGCGTATCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGTAAAGGGAGCCAGAGATTATTGTCGTATTCTGGTGGCAGATCGGCATGGGATGCGTATGAGTGAACTGCTTGATCGGCATTATCAGGGCCTTGACCTGAATGAAGTTAGAATAAATATTCGCCGACTGAAGAACGGAtt                                                           <  1:51381‑M2/201‑1 (MQ=255)
                                                                                                                                                                                                         attcaAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacc                                                >  1:135478‑M2/1‑47 (MQ=255)
                                                                                                                                                                                                          tgaacataaaacactatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGGGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGGTGCGTATTAGTGAACTGCTTGATCTGCCTTATCAGGACCTTTAACTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTtcc                                               >  1:89829‑M2/39‑250 (MQ=255)
                                                                                                                                                                                                                 aaaacaatatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTTTTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGGAGGGAGAATAAATATTTGCCGACTGAGGAACGGATTTTCTACCGTTCACCCgttt                                        >  1:95977‑M2/32‑250 (MQ=255)
                                                                                                                                                                                                                  tatCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgc                                        <  1:119331‑M2/250‑213 (MQ=255)
                                                                                                                                                                                                                  aaacactatcaataagttggagtcatgaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTAc                                       <  2:12769‑M2/221‑1 (MQ=255)
                                                                                                                                                                                                                      actatcaataagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGttt                                   <  1:116517‑M2/225‑1 (MQ=255)
                                                                                                                                                                                                                         gTTAGGAGTACTCCTATTGTGAGTAAACGTCggtgctgctgccaacttactgatttagtgtatgatggtgtatttgcggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaa                                 <  2:398116‑M2/250‑220 (MQ=255)
                                                                                                                                                                                                                              taagttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGGTGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGGAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCCACCGTTACGTTTTGATGagg                           >  1:44428‑M2/19‑250 (MQ=255)
                                                                                                                                                                                                                                agttggagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGGATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGGCCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGcgg                         >  2:313351‑M2/17‑250 (MQ=255)
                                                                                                                                                                                                                                     gagtcattaccTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGACATGATGCAGGCGGTTTGTTACGGGGCAACGGGGGCAAGAGATTATTGTCTTATTCTGTTGGCATATCGGAATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAAGAAGGTAGAATAAATATTCGCCGCCTGAAGAAAGGATTTTCTACCGGTCACCCGTTACGTTTTGATGGGCGTGAAGc                    >  1:164785‑M2/12‑251 (MQ=255)
                                                                                                                                                                                                                                     actaTTTTGAGTAAACGTCggtgatgctgccaacttactgatttagtgtatggtggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatg                    <  2:94289‑M2/251‑233 (MQ=255)
                                                                                                                                                                                                                                      agtcattatcTAAACGTTGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCATCGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGATTGAAGAACGGACTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGcc                   <  1:307432‑M2/241‑1 (MQ=255)
                                                                                                                                                                                                                                                 aaaCGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTAGTGTCTTATTCTGTTGGCATAGCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCTACTGAAGAACGGATTTTCTTCCGTTCACCCGTTACGTTTTGATGAGCGTTAAGCCGTGGAACGCt         <  2:401473/250‑1 (MQ=255)
                                                                                                                                                                                                                                                       cgtTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGGTGTGAGGAGCGTGAAGCCGTGGAACGCGGGACCCa  <  2:265230/251‑1 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                          
TTTTAAGCAACTGGAAGTTAATCCACTGCAATCTATTGTTATATTGAATCAAATCAATGAAAATAGATGTTGTCACATCAGTGATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAATATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCA  >  NC_000913/4541802‑4542299

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.