Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,434,629 IS1 (–) +8 bp coding (1930‑1937/1944 nt) cpdB ← 2',3'‑cyclic‑nucleotide 2'‑phosphodiesterase/3'‑nucleotidase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1978503 =NA (NA)37 (0.970) 35/488 0.2 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 4434636 0 (0.000)coding (1930/1944 nt) cpdB 2',3'‑cyclic‑nucleotide 2'‑phosphodiesterase/3'‑nucleotidase
* ? NC_000913 3583428 =NA (NA)25 (0.660) 24/488 0.5 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 4434629 = 0 (0.000)coding (1937/1944 nt) cpdB 2',3'‑cyclic‑nucleotide 2'‑phosphodiesterase/3'‑nucleotidase

CTCACGCCGCTGGGCGAGCAGGTGAGCGAAAAGGTTGCTGCACTGGCGGACTGGATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACGCTGCGGCTTTATCTGACGGAGAGGTTTCGAAACGGATATCCAGTTTCTTATCGCCAGCTATCGGTGCTAAACGCCAGTTGTTATCTGCCGCCGGGTGAATTTCCCCCGCACGTTTCGACTCATCAGCAATCCACGCTGCCAGCACCGAGCGGTTCTCATCCGGTGAAGCA  >  NC_000913/4434386‑4434883
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                       
ccattcatggccatatcaatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagccgagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcaggagctgcacaggagggaacgctgatagaaacagaagccactggagcacctaaaaaacaccttcataaacaaaatcagtaagttggcagaatcaacCTCAAATc                                                                                                                                                                                                                                                         >  2:392502‑M2/244‑251 (MQ=255)
 ccgcgcgtgtgggcgggcaGGTGGGCGAAAAGGTTGCTGCATTGGCGGTCTGGATGGAGTTGAATTTGCCCGGGGTGTTGGGGGTGCGGGATGAACGTGCGGAATAATTGCCGGATGCGCTGAGCTTTTCTGGTCTCCGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGAATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCg                                                                                                                                                                                                                                                        >  2:131093‑M2/10‑250 (MQ=255)
         cggggcgggcagGGGAGCGAAAAGGTTGCTGCACGGGGGGGCTGGATGGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgac                                                                                                                                                                                                                                                >  2:67806‑M2/3‑242 (MQ=255)
              agcaatgatgttctggtgcgtaccgtgtttagaagcggtgtaagtgaactgcagtttccatgttttacggcagtgagagcagagatagcgcttatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagccgaacaggaggcacagctgatagaaacagaagccactggagcacctcaaaaacaccatcagaccctaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATc                                                                                                                                                                                                                                            <  1:389402‑M2/21‑1 (MQ=255)
                   aGGTGAGCGAAACGGTTGCTGCACTGGCGGACTGGATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAAATGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAACTGCCGGCTGCGGTTGATGATTTATAGGCCGAAAAAAAAGAGTTTTACTTACTCAAATCggtaatgaatccaacttat                                                                                                                                                                                                                                      <  2:229497‑M2/251‑20 (MQ=255)
                    gtgaaGCGAAAAGGTGGCTGCTTTGGCGGCCGGGATTGAGTTGAAGTTGCTCGAGGTGTTGGCGGTGCGGGATGAACGGGAGTAATAACTGCCGGAGGCGCGGAGCTTACCTGGTTTACGGTTTATGGTTTGTAGGGCGGATAAGATGCGCCAGCATCGCAACCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATctgtaatgactccaacttatt                                                                                                                                                                                                                                     <  1:72936/247‑21 (MQ=255)
                          cGAAAAGGTTGCTGCACGGGGGGACTGGATTGAGTGGAAGTTGCCCGAGGTGTTGGGGGTGCGGGATGAAGGGGGGGCATAACGGCGGGAGGCGCTGAGCTTACCTGGTCGACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCGGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagt                                                                                                                                                                                                                               >  2:114139‑M2/1‑225 (MQ=255)
                              aaGGTTGCTGCACTGGCGGACTGGATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttt                                                                                                                                                                                                                           <  2:152980‑M2/251‑31 (MQ=255)
                                   tgctgcACTGGCGGACTGGATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGCTGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattggtagtgttttatgt                                                                                                                                                                                                                      <  2:108746‑M2/251‑36 (MQ=255)
                                    gctgcACTGGCGGACTGGATTGAGTGAAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACGGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatattgttttatgt                                                                                                                                                                                                                      >  1:123201‑M2/1‑215 (MQ=255)
                                     cggcatgggcggactgGATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGGGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttc                                                                                                                                                                                                                    >  1:107345‑M2/8‑214 (MQ=255)
                                     cggcacTGGCGGATGGGATTGAGTTGAATTGGCCCGGGGGGTTGGAGGTGCGGGATGACCGTGCGGTATAACTGCCGGAGGCGTTGAGTTTATCTGGTCTACGGGGCATGTTTTGTAGGGGGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttgtatgttc                                                                                                                                                                                                                    >  2:310012‑M2/3‑214 (MQ=255)
                                             gaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTAtt                                                                                                                                                                                                            <  2:300442‑M2/53‑1 (MQ=255)
                                             gCGGACTGGTTTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGGGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatg                                                                                                                                                                                                            >  2:276896‑M2/1‑206 (MQ=255)
                                              gggaCTGGATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGAGGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgc                                                                                                                                                                                                           >  1:108746‑M2/2‑205 (MQ=255)
                                               ggACTGGCTTGAGTTGAATTTGCACGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCAAGGCTTGTAGGGCGGATAAGATGCGCCAGCCTCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGCGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttaagataatgcc                                                                                                                                                                                                          <  2:1540‑M2/251‑48 (MQ=255)
                                                gACTGGATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgccc                                                                                                                                                                                                         <  1:308607‑M2/251‑49 (MQ=255)
                                                  ggtgtaagtgaactgcatttgacatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttctgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcaccccaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAATCCCGATATCATCGGTCGCGACTGCATTCATCg                                                                                                                                                                                                       <  2:181973‑M2/58‑1 (MQ=255)
                                                     gtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGAt                                                                                                                                                                                                    <  2:102392‑M2/61‑1 (MQ=255)
                                                         gAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                                                                                                                                <  1:348184‑M2/251‑58 (MQ=255)
                                                          aGTTGAATTTGCCCGAGGTGTTGGCGTTGCGGGATGAACGGGCGGCATATCTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGTGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg                                                                                                                                                                                               >  1:272275‑M2/1‑193 (MQ=255)
                                                                gcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcatctcaaaaacgccatcatacactaaatcagtaagttggcagcagcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCtt                                                                                                                                                                                           <  1:364067‑M2/70‑1 (MQ=255)
                                                                gcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCttt                                                                                                                                                                                          <  2:143048‑M2/71‑1 (MQ=255)
                                                                         aGGTGTTGGCGGTGCGGGATGAACGTGCGGCCTAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGAAGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc                                                                                                                                                                                <  1:131707‑M2/251‑74 (MQ=255)
                                                                               tGGCGGGGCGGGATGAACGTGCGGCATAACTGCCGGATGCGATGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGCTTTATAGGCCGACAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                                                                                                                                          <  2:237409‑M2/251‑80 (MQ=255)
                                                                                  ggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACGCTGCg                                                                                                                                                                       >  2:16049‑M2/162‑251 (MQ=255)
                                                                                     agtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACGCTGCGGCt                                                                                                                                                                    >  2:390829‑M2/159‑251 (MQ=255)
                                                                                                    gggaatatcggccgtatgcgcTGAGCTTATCTGGTCTAGGGTGCATGGCTTTTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgt                                                                                                                                                     >  2:348184‑M2/11‑151 (MQ=255)
                                                                                                       gctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTACTAAACGCTGCGGCTTTATCTTACGGAGAGGtt                                                                                                                                                  >  1:88663‑M2/141‑251 (MQ=255)
                                                                                                       gctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACGCTGCGGCTTTATCTGACGGAGAGGtt                                                                                                                                                  >  2:103429‑M2/141‑251 (MQ=255)
                                                                                                          aaCTGCGGGATGCGCTGAGTTTATCTGGTCGAGGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccag                                                                                                                                                >  2:131707‑M2/1‑145 (MQ=255)
                                                                                                                    ggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACGCTGCGGCTTTATCTGACGGAGAGGTTTCGAAACGGatat                                                                                                                                     <  1:103742‑M2/124‑1 (MQ=255)
                                                                                                                          tttgccgttacgcaccaccccggcagtagctgaacaggaggtacagctgagagaaacagaagccacgggagcacctcaaaatcaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACGCTGCGGCGTTATCTGACGGAGAGGTTTCGAAACGGATATCCAg                                                                                                                                 <  2:356966‑M2/128‑1 (MQ=255)
                                                                                                                                  cTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattc                                                                                                                       <  1:197442‑M2/251‑131 (MQ=255)
                                                                                                                                       accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaactccatcatacactaaaccagtaagttggcagcatcaccCGCAAATCCACCTGATAAATCGCAAACCCTATATCATCGGGCGCGACTGTATTCATCGGATACTGCCCt                                                                                                                                                                                            <  2:38868‑M2/69‑1 (MQ=255)
                                                                                                                                       accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCt                                                                                                                                                                                            >  1:38868‑M2/109‑177 (MQ=255)
                                                                                                                                        ccaccccgtcagtcgctgaacaggatggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcataccctaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCCATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATACACGCTGCGGCCTTATCTGATGGAGAGGTTTCGAAACGGATATCCAGTTTCTTATCGCCAGCt                                                                                                                 <  1:106187‑M2/144‑1 (MQ=255)
                                                                                                                                           ccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTGTAATAAACGCTGCGGCTTTATCTGACGGAGAGGTTTCGAAACGGATATCCAGTTTCTTATCGCCAGCTATc                                                                                                              <  1:260583‑M2/147‑1 (MQ=255)
                                                                                                                                            gggaagggcttgtaGGTCGGATAAGATGTGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgcc                                                                                                             >  1:146071‑M2/7‑111 (MQ=255)
                                                                                                                                             ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACGCt                                                                                                                                                                          <  2:394472‑M2/87‑1 (MQ=255)
                                                                                                                                             ccgtcagtagctgaacaggagggacagctgatagaaacagaagcaactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACGCt                                                                                                                                                                          >  1:394472‑M2/103‑189 (MQ=255)
                                                                                                                                               cATGGCTTGTAAGGCGGATAAAATGCGCCAGCCTCGCATCCGCCAATAAATGCCGGATGCGGTTGATGGTTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAAGCggtaatgactccaacttattgatagtgatttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccccgccgggccaggtgatgcatcagatacaggttatgccgct                                                                                                          <  2:291895‑M2/251‑144 (MQ=255)
                                                                                                                                                  agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACGCTGCGGCTTTATCTGACGGAGAGGTTTCGAAACGGATATCCAGTTTCTTATCGCCAGCTATCGGTGCTa                                                                                                       <  1:103429‑M2/154‑1 (MQ=255)
                                                                                                                                                              ggATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtat                                                                                           <  2:136482‑M2/251‑159 (MQ=255)
                                                                                                                                                               gATAAGATGGGCCAGAATCGCGTCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtata                                                                                          >  2:343341‑M2/1‑92 (MQ=255)
                                                                                                                                                               aataaaagggccaagcatcgcatccgcCAATAAAGGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtata                                                                                          >  2:159072‑M2/14‑92 (MQ=255)
                                                                                                                                                                             gcatcgcatcCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgatta                                                                            >  1:136482‑M2/1‑78 (MQ=255)
                                                                                                                                                                                aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACGCTGCGGCTTTATCTGACGGAGAGGTTTCGAAACGGATATCCAGTTTCTTATCGCCAGCTATCGGTGCTAAACGCCAGTTGTTATCTgcc                                                                                   >  1:368711‑M2/68‑241 (MQ=255)
                                                                                                                                                                                aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGAGATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACGCTTCGGCTTTATCTTACGGAGAGGTTTCGAAACGGATATCCAGTTGCTTATCGCCAGCTATCGGTGCTAAACGCCAGTTGTGATCTgcc                                                                                   <  2:368711‑M2/174‑1 (MQ=255)
                                                                                                                                                                                               agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACGCTGCGGCTTTATCTGACGGAGAGGTTTCGAAACGGATATCCAGTTTCTTATCGCCAGCTATCGGTGCTAAACGCCAGTTGTTATCTGCCGCCGGGTGAATTTCCCCCGCACGtt                                                          >  1:225069‑M2/53‑251 (MQ=255)
                                                                                                                                                                                                           ggTTGATGATTTATAGGCCGAAAAAGAAGTTTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcat                                              >  2:103417‑M2/1‑48 (MQ=255)
                                                                                                                                                                                                              tgatgaTTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatac                                            <  1:130687‑M2/250‑206 (MQ=255)
                                                                                                                                                                                                                     ttATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggcc                                     <  1:224540‑M2/250‑213 (MQ=255)
                                                                                                                                                                                                                       ataGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactacaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagc                                  <  1:173678‑M2/251‑216 (MQ=255)
                                                                                                                                                                                                                         aGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagcc                                 <  2:89144‑M2/250‑217 (MQ=255)
                                                                                                                                                                                                                            ccGAAAAAGAAGTGTTTTACTTACTCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatcc                             <  1:331852‑M2/251‑221 (MQ=255)
                                                                                                                                                                                                                               agtaagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCAGATATCATCGGACGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAAAGATGCGGCTTTATCTGGCGGCGAGGTTTCGAAACGGATATCCAGTTTCTTATCGCCAGCTATCGGTGCTAAACGCCAGTTGTTATCTGCCGCCAGGTGAATTTCCCCCGCACGTTTCTACTAATTCGCAATCcacgctgcaatcacc                          >  2:340176‑M2/21‑244 (MQ=255)
                                                                                                                                                                                                                                  aagttggcagcatcaccCTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACGCTGCGGCTTTATCTGACGGAGAGGTTTCGAAACGGATATCCAGTTTCTTATCGCCAGCTATCGGTGCTAAACGCCAGTTGTTATCTGCCGCCGGGTGAATTTCCCCCGCACGTTTCGACTCATCAGCAATCCACGCTGCCAGCACCGa                        <  1:218625‑M2/233‑1 (MQ=255)
                                                                                                                                                                                                                                           tttACTTACTCACATAggtaatgcctccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcctgcagctccaacgattttgagcacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgctttctgattacgtgcagctttcccttcagtcgggattcatacagcagccagccctccgtcatccatatcacc              <  2:251746‑M2/251‑236 (MQ=255)
                                                                                                                                                                                                                                               cttactCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgt          <  1:324572‑M2/251‑240 (MQ=255)
                                                                                                                                                                                                                                                ttactCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtc         <  1:103492‑M2/251‑241 (MQ=255)
                                                                                                                                                                                                                                                 tactCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtc         <  1:303493‑M2/250‑241 (MQ=255)
                                                                                                                                                                                                                                                   ctCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACGCTGCGGCTTTATCTGACGGAGAGGTTTCGAAACGGATATCCAGTTTCTTATCGCCAGCTATCGGTGCTAAACGCCAGTTGTTATCTGCCGCCGGGTGAATTTCCCCCGCACGTTTCGACTCATCAGCAATCCACGCTGCCAGAACCGAGCGGTTCTCATCCGGTg       >  1:404100/1‑250 (MQ=255)
                                                                                                                                                                                                                                                    tCAAATCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtcaa       <  1:336561‑M2/249‑243 (MQ=255)
                                                                                                                                                                                                                                                       aaTCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACGCTGCGGCTTTATCTGACGGAGAGGTTTCGAAACGGATATCCAGTTTCTTATCGCCAGCTATCGGTGCTAAACGCCAGTTGTTATCTGCCGCCGGGTGAATTTCCCCCGCACGTTTCGACTCATCAGCAATCCACGCTGCCAGCACCGAGCGGTTCTCATCCGGTGAAGCa  <  1:79018/251‑1 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                       
CTCACGCCGCTGGGCGAGCAGGTGAGCGAAAAGGTTGCTGCACTGGCGGACTGGATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAACTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAATCGCAAACCCGATATCATCGGTCGCGACTTTATTCATCGGATACTGCCCTTTCTCTTTAATAAACGCTGCGGCTTTATCTGACGGAGAGGTTTCGAAACGGATATCCAGTTTCTTATCGCCAGCTATCGGTGCTAAACGCCAGTTGTTATCTGCCGCCGGGTGAATTTCCCCCGCACGTTTCGACTCATCAGCAATCCACGCTGCCAGCACCGAGCGGTTCTCATCCGGTGAAGCA  >  NC_000913/4434386‑4434883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.