| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,993,231 | IS5 (–) +4 bp | coding (1138‑1141/1377 nt) | ygeH → | putative transcriptional regulator YgeH |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 30 (0.790) | 30/488 | 0.3 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 2993234 | 0 (0.000) | coding (1141/1377 nt) | ygeH | putative transcriptional regulator YgeH | |||||
| * | ? | NC_000913 | 2993231 = | 0 (0.000) | 26 (0.680) | 26/488 | 0.4 | 100% | coding (1138/1377 nt) | ygeH | putative transcriptional regulator YgeH |
| ? | NC_000913 | 3130146 = | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
ATTTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGG‑TCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAA‑CTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACC > NC_000913/2288677‑2289162 | aTTTGATCACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGG‑ACCCCTAAACCCGCTGGGTATTTTTTTTCAGGACAACACCATCAA‑CTGTCTCACCATACTCACCCTTTTTTTCCAATGCTATTGGGGACTATaaggaacgggc > 2:242000/1‑246 (MQ=255)aTTTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGG‑TCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAA‑CTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGc < 1:242000/251‑1 (MQ=255) ccGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCACTGTACTGATACACTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCTG‑TCCCCTAAACCATCTGTATATCTTTTTTCAGGCCAACACCCTCAAACT‑TCTCACCAAACTCCACAGTTTGTGTCAATGCTTTGGGTGCATTTAATGGAGGTGCCAATaaa > 2:381461/1‑248 (MQ=255) gAGTATTCTGCGGCGACATTCATTTCAATGTAATGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGG‑TACCCTAAACCAGCTGGATATTTTTTTCCAGGACAACACCATCAA‑CTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGGGGATATAAGGAAGGTGCGAATAAGCGGGGGAATTCTTCTCg > 1:302236/1‑251 (MQ=255) aTTCTGCGGCGCCATTCATTTCAATTTACTGATTCCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGG‑TCCCATAAACCAGCTGGATATCTTTTTCCAGGATAACACCATCAA‑CTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTg < 1:166147/251‑1 (MQ=255) tCTGCGGAGCCATCCATTTCATTTTACTGATACCCTCCCTTCATTTCAGCATTATTACTTACACCACATTCTTCTATATGCTGTTATCCGCCAGGATTGATTTTCGTATTATTGGCGGCTCCC‑CAAACCCGCTGGGTATTTTTTTTCCGGACACCACCATCCA‑ATCTCTCACCCTACTCCACAGTTGTTGTCAATGCATTGGGGGGATATCAGGACGGAGCGACAAAACGGGGAAAttattttccggtgac > 2:167044/1‑238 (MQ=255) attTCAATGTACTGATTCACTTCTTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGTCGG‑TCCCATAAACCAGCTGGATATCTTTGTCCATGACAACACCAGCAA‑CTGTCTTACCATACTCAACAGTTGATGCCAAGTCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGTGGAAATGCTTCTCGGCTGGATCAGCcatttcattt < 2:51329/251‑1 (MQ=255) atttACTGATACCCTCCGTTAATTTCAGTATTATTACTTACCCCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGG‑TCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAA‑CTGTCTCACCATACTCAACAGGTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACGCAGTCATTGCATTTCTTCAt < 2:155585/248‑1 (MQ=255) gATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGG‑TCCCATAAACCAGCTGGATATCTTTTTCCCGGACAACACCATCAA‑CTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGCATAAGCGGGGAAATTCTTCTCGGCTGGCTCAGTCATTTCATTTCTTTATGTTTg > 1:216551/1‑249 (MQ=255) cAAATTCTTTTATCTGCTATTCTCCGCCAGGATTGATTTTCGTATTATTGGCGG‑TCCCCTAAACCCGCAGGATATCTTTTTCCCGGACCACACCAACCA‑CTGTCTCACCATAATCCACAGTTTATGCCAATGCTATGGGTGAATATTAGGAAGGGGAGCATAAGGGGGGGAATTCTTCTCGGGTGAATTCGTCATTTCATTTCTTCCTGTTTGGGCCGGTTTTTTTTCCCGTAAATTCCTTTAATCAGCCt > 2:383006/1‑251 (MQ=255) ccTTTTATATGCTGTTCTCCGCCAGGAGTGATTTTCGTATTATTGGCGG‑TCCCATAAACCAGCTGGATATCTTGTTCCAGGACAACACCATCAA‑CTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTGTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTa < 1:167044/250‑1 (MQ=255) tttATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGG‑TCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAA‑CTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAg < 2:377328/249‑1 (MQ=255) gTTCTCCGCCAGGATTGATGTTCGAGTTATAGGCGG‑TCGCATAAACCAGTTAGATATCTTTTTCCATTACAACCCCATCAA‑CCTTCTCACCATACTCAACAGTTGATGCCAATGCGATGGGTGAATATAAGGAAGGTGCGAATAATCGGGGGAATTCTTCTCTGCTGACTCAGTCATTTCATGTCTGCATGTTGGAGGCGATTTTTCCTCCAGTGAATGTCGTGATTGAGACTATTTTTACCGTTTCTTCg < 2:336526/251‑1 (MQ=255) aGGATTGATTTTCGTATTATTGGCGG‑TCCCATAACCCAGCTGGATATCTTTTTCCAGGACAACACCATCAA‑CTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAgg < 1:337225/251‑1 (MQ=255) ttgattTTCGTATTATTGGCGG‑TCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACCCCATCAA‑ATGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGGGGATATAAGGAAAGTGCGAATAAGCGGGGAAATTCTTATCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTTTTCCGTAAATGCCTTTAATCATCCTATTTAGAACGTTTTTTCGCCATTTTAggagct > 1:58476/1‑247 (MQ=21) ttttCGTATTATTGGCGG‑TCCCCTAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAA‑CTGTCTCACCATACTCAACAGTTGATGCCAATGTTATGGGGGAATATAAGGAAGGTGCGAATAAACGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCCTTTTTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATACCTTGTATCAGCCTATTTAGACCCTTTCTTTGCCATTTAAGGAGTTATcc > 1:217277/1‑251 (MQ=21) ggCGG‑TCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAA‑CTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGt < 1:6030/250‑1 (MQ=255) aTAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAA‑CTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGAtctctc > 2:50369/1‑251 (MQ=255) gTCTCACCATACTCAACTGTTGATGCCAAGTCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGTGAAATTCTTCGCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGATATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTTGCCAg < 1:387982/250‑1 (MQ=14) cATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATa < 2:122316/251‑1 (MQ=255) tACTCAACAGTTGATGCGAATGCTATGGGTGAATATAAGGAAGGTGCGAATGAGCGGAGACATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCCTGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTAAATCCGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGCAACAGGCTGGCCAGCGTGAATAAc > 2:393425/1‑251 (MQ=14) tGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGtt > 2:26971/1‑251 (MQ=39) gCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGtt > 1:311155/1‑250 (MQ=39) gCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGttt > 1:142251/1‑251 (MQ=35) aaTATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAAcc < 1:50369/251‑1 (MQ=31) | ATTTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGG‑TCCCATAAACCAGCTGGATATCTTTTTCCAGGACAACACCATCAA‑CTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACC > NC_000913/2288677‑2289162 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |