Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	2,174,359	IS5 (+) +4 bp	coding (205‑208/285 nt)	gatB ←	galactitol‑specific PTS enzyme IIB component

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2101749 =	NA (NA)	14 (0.370)	13/488	1.2	100%	noncoding (1195/1195 nt)	IS5	repeat region
	?	NC_000913	2174359 =	0 (0.000)					coding (208/285 nt)	gatB	galactitol‑specific PTS enzyme IIB component
*	?	NC_000913	= 2174362	0 (0.000)	27 (0.710)	24/488	0.5	100%	coding (205/285 nt)	gatB	galactitol‑specific PTS enzyme IIB component
	?	NC_000913	= 2290113	NA (NA)					noncoding (1/1195 nt)	IS5	repeat region

CACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCATGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGGTCACCCCTGTAAGATAGTCAGAATTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAACGGAATATCGCCAAAACTACGATCCACTTTGGCAGTGGTGCATATCAAATGCACACCATCCATATAGGTTTCTATTTCATTAACCCGACACTGGATTAATTCAACAGGAATATTATGATTCTGACACAACTCTTTAATTTCTTCCGCCGCCATCGTAGAGGTCGCAACCGCGCCTCCGCAAGCGACAATAATCTTGCGTTTCATAAATAGTCCTTTTTATTGTTACAGAGGGATTTATTC  >  NC_000913/2174120‑2174602                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                 cacaAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCATGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGGTCACCCCTGTAAGATAGTCAGAATTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAAggaaggtg                                                                                                                                                                                                                                          <  2:364327‑M1/251‑9 (MQ=255)         aaatGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAACACAATCGCCTGCCTTCATGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATAACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGGTCACCCCTGTAAGATAGACAGAATTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAACGGCATTCCGTGCACTAAggaaggtgcgaaca                                                                                                                                                                                                                                    >  2:34037‑M1/2‑235 (MQ=255)               ccaactggcgatgttagtcacgctggccaacctgtttcgggcgggccaaatgagacgtcagtgggagagatctcactaaaaactggggataacgccttagatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttatgcgcaccttccCGAACGGAATATCGCCAAAACTACGa                                                                                                                                                                                                                            <  2:376013‑M2/26‑1 (MQ=255)                            cccGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCATGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGGTCACCCCTGTAAGATAGTCAGAATTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcat                                                                                                                                                                                                                <  1:261676‑M1/250‑35 (MQ=255)                                 cacgctggccaacctgattcgggcggaccaaatgatacgtcaggtggagaaatctcactaaaaactggggagaacgccttaaatggcgaagaaacgttctaaataggctgatgcaaggcaattacgggagaaaaaatcggctaaaactttaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattctctccttcaCTAACGGAATATCGCCAAAACTACGATCCACTTTGGCAgtggt                                                                                                                                                                                                           <  2:221697‑M2/43‑1 (MQ=255)                                    gctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgctccttccCTAACGGAATATCGCCAAAACTACGATCCACTTTGGCAGTGGTGCat                                                                                                                                                                                                       <  1:92976‑M2/47‑1 (MQ=255)                                    ccgggccaaccttgttcgggcggcccaaatgatacttcagtgggagagatctccctaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgatgcaaggcatctccgggagacaaaatcggctcaaacatgaagaaatgaattgactgagtcagccgagaagaattgccccgcttattcgtaccttccCTAACGGAATATCGCCTAAACTACGATCCACTTTGGCAGTGGTGCat                                                                                                                                                                                                       <  2:213334‑M2/47‑1 (MQ=255)                                                         ggaccaaatgatacgtcagtgggagagatcgcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaattcccccgcttattcgcacctgccCTAACGGAATATCGCCAAAACTACGATCCACTTTGGCAGTGGTGCTTATCAAATGCACACCATCCata                                                                                                                                                                                  <  2:71228‑M2/68‑1 (MQ=255)                                                                atgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGAATATCGCCAAAACTACGATCCACTTTGGCAGTGGTGCATATCAAATGCACACCATCCATATAGGttt                                                                                                                                                                           <  1:172556‑M2/75‑1 (MQ=255)                                                                       ccTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGGTCACCCCTGTAAGATAGTCAGAATTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc                                                                                                                                                                    >  1:155775‑M1/1‑173 (MQ=255)                                                                         tAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGGTCACCCCTGTAAGATAGTCAGAATTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcac                                                                                                                                                                  >  1:14131‑M1/1‑171 (MQ=255)                                                                          agtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaatatgctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTGAATGTCGCTAAAGCTACGACCCACTGTGGCAGTGGTGCATATCAAATGCACACCATCCATATAGGTTTTTATTTCAtt                                                                                                                                                                 <  1:371395‑M2/85‑1 (MQ=255)                                                                           gtgagagagatcgcactaaaaacagtggagaacgccttacatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGAATATCGCCAAAACTACGATCCACTTTGGCAGTGGTGCATATCAAAGGCACACCATCCATATAGTTTTCTATTTCATTa                                                                                                                                                                <  1:298850‑M2/86‑1 (MQ=255)                                                                                  aGAAAAAATAATGATGACAAGCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGGTCACCCCTGTAAGATAGTCAGAATTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccta                                                                                                                                                          <  2:319298‑M1/250‑89 (MQ=255)                                                                                      aaaaTAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGGTCACCCCTGTAAGATAGTCAGAATTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg                                                                                                                                                     >  1:303798‑M1/1‑158 (MQ=255)                                                                                          ctaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGAATATCGCCAAAACTACGATCCACTTTGGCAGTGGTGCATATCAAATGCACACCATCCATATAGGTTTCTATTTCATTAACCCGACACTGGAtt                                                                                                                                                 >  2:76848‑M2/151‑251 (MQ=255)                                                                                            atgatgACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGGTCACCCCTGTAAGATAGTCAGAATTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg                                                                                                                                               <  2:104817‑M1/251‑100 (MQ=255)                                                                                                  aCAATCGGCAGCATCACCGTAGGGCAGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGGTCACCCCTGTAAGATAGTCAGACTTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttagccgacagtgaattc                                                                                                                                          >  1:30875‑M1/1‑146 (MQ=255)                                                                                                        ggCAGCATCACCGTAGGGCCGAGGTCGCGAATCTAACGCATGACTTCTAAAAACATAGGTCACCCCTGTAAGATAGTCAGAATTTTATTTTGTAATGATTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagt                                                                                                                                    >  2:390115‑M1/1‑140 (MQ=255)                                                                                                              cttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGAATATCGCCAAAACTACGATCCACTTTGGCAGTGGTGCATATCAAATGCACACCATCCATATAGGTTTCTATTTCATTAACCCGACACTGGATTAATTCAACAGGAATATTATg                                                                                                                             >  1:96755‑M2/131‑251 (MQ=255)                                                                                                                        ggCCGTGGTCGAGAATATAACGAATGACTTCTGCCAACATAGGTCACCCCTGTAAGATAGTCAGAATTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAAAGTCATGACGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatccacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc                                                                                                                     >  1:308538‑M1/1‑124 (MQ=255)                                                                                                                            gAGGTCGAGAATATAACGCATGACTTCGGAAAACATAGGTCACCCCTGTAAGATATTCAGAATTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcattagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa                                                                                                               <  1:132891‑M1/251‑132 (MQ=255)                                                                                                                            aaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGAATATCGCCAAAACTACGATCCACTTTGGCAGTGGTGCATATCAAATGCACACCATCCATATAGGTTTCTATTTCATTAACCCGACACTGGATTAATTCAACAGGAAGATTATGATTCTGACACAAct                                                                                                               <  1:272934‑M2/135‑1 (MQ=255)                                                                                                                               gTCGAGAATATAACGCATGACTTCTGAAAACATAGGTCACCCCTGTAAGATAGTCAGAATTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt                                                                                                                                                               >  1:348295‑M1/1‑117 (MQ=255)                                                                                                                               gTCGAGAATATAACGCATGACTTCTGAAAACATAGGTCACCCCTGTAAGATAGTCAGAATTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt                                                                                                                                                               <  2:348295‑M1/200‑84 (MQ=255)                                                                                                                                                                     aCCCCTGTAAGATAGTCAGAATTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggc                                                                       >  2:293798‑M1/1‑79 (MQ=255)                                                                                                                                                                      aaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGAATATCGCCAAAACTACGATCCACTTTGGCAGTGGTGCATATCAAATGCACACCATCCATATAGGTTTCTATTTCATTAACCCGACACTGGATTAATTCAACAGGAATATTATGATTCTGACACAACTCTTTAATTTCTTCCGCAGCCATCGTAGAGGTCGCAACCgcgc                                                                     >  1:69142‑M2/75‑251 (MQ=255)                                                                                                                                                                               gATAGGCAGAATTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtg                                                            <  2:303798‑M1/251‑183 (MQ=255)                                                                                                                                                                                   caggaagaaatgaaaggcctgagccagccgagaagaactgccccgcttattcgccccttccCTAACGGAATATCGCCAAAACTACGACCCACTTTGGCAGTGGTGCATATCAAATGCACACCATCCATATAGGTTGCTATTTCATTAACCCGACACTGGATTAATGCAACAGGAATATTATGATTCTGACACAACTCTTTAATTTCTTCCGCCGCCATCGTAGAGGTCGCAACCGCGCCTCCGCAAGCGAc                                                        <  2:30472‑M2/190‑1 (MQ=255)                                                                                                                                                                                            ttattttGTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagc                                               >  1:13403‑M1/1‑56 (MQ=255)                                                                                                                                                                                              tttttgTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcaatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagcccagaaaagagattttcttgtcccgcatggagcagcttctgccatggcaaaacatggtggaagtcatcgagccg                                             >  2:219141‑M1/2‑54 (MQ=255)                                                                                                                                                                                                aatgactgatccagccgagaagaatttccccgcttattcgcaccttccCTAACGGAATATCGCCAAAACTACGATCCACTTTGGCAGTGGTGCATATCAAATGCACACCATCCATATAGGTTTCTATTTCATTAACCCGACACTGGATTAATTCAACAGGAATATTATGATTCTGACACAACTCTTTAATTTCTTCCGCCGCCATCGTAGAGGTCGCAACCGCGCCTCCGCAAGCGACAATAATCTTGCGt                                           <  1:334624‑M2/203‑1 (MQ=255)                                                                                                                                                                                                            cgataccgatacCAGAAATAAAAGGCCTGCCGTGAACTCAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcctgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgcgccgttttacccccaggc                               >  2:191310‑M1/1‑40 (MQ=255)                                                                                                                                                                                                                  cgataccAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggta                          >  2:179731‑M1/1‑34 (MQ=255)                                                                                                                                                                                                                     taccAGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtctctgatatgagatcatgtttgtcatctggagccatagaccagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaacagagattttcttgtcccgcctggagcagattctgccatggcaaaacatggtggcagtcatcgagccgttttaccccaagtctggtaatgg                      >  2:7812‑M1/1‑31 (MQ=255)                                                                                                                                                                                                                         aGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccgg                  >  1:293851‑M1/1‑27 (MQ=255)                                                                                                                                                                                                                         aGAAATAAAAGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccgg                  <  2:155775‑M1/251‑225 (MQ=255)                                                                                                                                                                                                                                aaaGGCTTGCCGTGAACTAAggaaggtgctaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagatattttcttgttccgcatggagcatattctgacatggcaaaacatggtggaagtcatcgagccgtttttccccaaggctggtaatggccggcgacctt           <  2:159078‑M1/251‑232 (MQ=255)                                                                                                                                                                                                                                  aGGCATGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga                                                                                                                       >  1:402690‑M1/1‑18 (MQ=255)                                                                                                                                                                                                                                      aTGCCGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggatggtaatggccggcgaccttatccgc     >  2:118659‑M1/1‑14 (MQ=255)                                                                                                                                                                                                                                          cGTGAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggggccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgctgg  >  1:112131‑M1/1‑10 (MQ=255)                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                 CACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCATGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGGTCACCCCTGTAAGATAGTCAGAATTTTATTTTGTAATGCTTCGATACCGATACCAGAAATAAAAGGCATGCCGTGAACTAACGGAATATCGCCAAAACTACGATCCACTTTGGCAGTGGTGCATATCAAATGCACACCATCCATATAGGTTTCTATTTCATTAACCCGACACTGGATTAATTCAACAGGAATATTATGATTCTGACACAACTCTTTAATTTCTTCCGCCGCCATCGTAGAGGTCGCAACCGCGCCTCCGCAAGCGACAATAATCTTGCGTTTCATAAATAGTCCTTTTTATTGTTACAGAGGGATTTATTC  >  NC_000913/2174120‑2174602

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.