| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,061,935 | G→A | S46N (AGC→AAC) | torD → | trimethylamine‑N‑oxide reductase‑specific chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,061,935 | 0 | G | A | 92.7% | 144.1 / ‑5.4 | 56 | S46N (AGC→AAC) | torD | trimethylamine‑N‑oxide reductase‑specific chaperone |
| Reads supporting (aligned to +/- strand): ref base G (0/1); major base A (28/23); minor base C (0/4); total (28/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.15e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCG‑TCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGAT > NC_000913/1061691‑1062181 | ggtggAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCG‑TCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAAcc < 2:128215/251‑1 (MQ=255) ggAAATTGAGAAGGACGACGGAAGTGTGGAGCAGGTGACGGCGTTCAACGGCCCTGTGGAGATGGGGGCGCAGTGCGAATATGTTCCCGCG‑TCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGAGTGCCTGTGTTTACGCCTGGCTAGCGCTGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCATTG‑C‑GCATATGGCTG‑AATGGTTTTCGTG‑GCTTATAAACGAAccgcc < 2:323391/251‑1 (MQ=255) aaaTTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCACGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCG‑TCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACcgccgc > 2:400232/1‑251 (MQ=255) aaTTGAGCAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCG‑TCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACcgccgcc > 1:341261/1‑250 (MQ=255) gagaAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCG‑TCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACt > 2:247792/1‑251 (MQ=255) agaAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCG‑TCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTg > 1:113988/1‑251 (MQ=255) aaGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGGGGAGATGGTGGCGCAGTGCGAATATGTCCCCGCG‑TCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCTTGTGTTTACGCCTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACGGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTgcg < 1:68785/251‑1 (MQ=255) ggaacggtggggtgggTGGCGGCGTTAAACGCCCCCGGGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCG‑TCGCAGGTAAAATCAGGCCCCCGCTGACAGCACAACAGATTGCCTGTTTTTACGCCTGGTTAGCGCAGTT‑GTTCTCCCGGGAGCTGAACGATGAACAACTGACGAAAATCGCCAGTG‑C‑GCAGAGGGCTG‑AATGTTTTTCGTT‑GCTAAAAAACGAACCGCCGCTCACTGCGGCGGTGAAc < 2:391076/237‑1 (MQ=255) ggAACAGTGGATCAGGTGACGGCGTTTAACGGCCCCGGGGAGATGGTGGCGCAGGGCGAATATGTCCCCGCG‑TCGCAGGTGAAATCATGACCACGCTGACAGCAAAACAGATTGCTTGTTTTTACGCCTGGCTAGCGCATTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGAAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCTTT‑GCTAAAAACCGAACCGCCGCTCACTGCGGCGGTGAAc < 1:97173/251‑1 (MQ=255) ggggtcgttaaagggCCCCGGGGAGATGGGGGCGAGGTGCAAATATGTTCC‑GCGGTCGCGGGGAAAATCATGCCCTCGCTGACATCACACAAGGTGGCGTGTGTTTACGCCTGGCGGGCGCATTT‑TTTCCCCCGTGAGCGGGATGATAAACAACTGACTAAATTCCCCAGTG‑C‑GCAGAGGGC‑G‑GATTGTTTTGGTTTGCTGAAAAACAAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTAt < 2:170123/238‑1 (MQ=255) gACGGCGTTTAACGGCCCCGTGGAGATGGGGGCGCAGTGCGAATATGTTCCCGCG‑TCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAACTGGAAAACCggat > 2:291029/1‑248 (MQ=255) cgttaaccGGCCCGGGGGAGATGGGGGCGCAGGGCGAATATTTTCCCGCG‑TCGCGGGTGAAATCATGACCACGCTGAAAGCACAACAGATTGCTTGTGTTTACGCCGGGCTAGCGCGGTT‑GTTCCCCCGGGAGCTGGACGATGAACAACTGACGCAAACCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCa < 1:163028/244‑1 (MQ=255) cGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCG‑TCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGGATTGCCACGCTgtc > 2:159508/1‑249 (MQ=255) ggtggCGCAGTGCGAATATGTTCCCGCG‑TCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGTTTGCCTGTGTTTACGCTTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATg < 1:98481/250‑1 (MQ=255) ggCGCAGTGCGAATATGTTCCCGCG‑TCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGcacc > 1:256766/1‑248 (MQ=255) cagggCGAATATGTTCCCGCG‑TCGCAGGTGAAATCATGCCCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCTGGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTg < 1:98666/247‑1 (MQ=255) cccGCG‑TCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTAATGCCACGCTTACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGAc > 1:167707/1‑251 (MQ=255) ccGCG‑TCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACt > 1:450960/1‑251 (MQ=255) ccgtGACCACGCAGACAGTACAAAGGATTGCTTTTTTTTACGCCTGGCTAGCGCAGTT‑TTTCTCCCGGGGGTGGGACGATGAACAACTGACAAAAACCGCCAGTG‑C‑GCAGGGGGCGG‑AATGGTTTGCGTG‑GCGAAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCtg < 2:371564/248‑1 (MQ=255) gACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGACGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGccaaac > 1:320708/1‑251 (MQ=255) aGCACAACAGATTGCCTGTGTTTACGCCTGACTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGACTGGAACTGGCCGCTGACTTTTGCGGCCTGTTTCTGATGACCGacaaaca > 1:366296/1‑249 (MQ=255) gcccaacaGTTTGCCTGTGTTGCCGCCGGGCTGGCGCAGTT‑GTTCCCCCGGGAGCTGGAAGATGAACAACGGACGAAAAGCGCAAGGG‑C‑GCAGATGGCTG‑AATGGTTTGCGTT‑GCGGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgc < 1:281719/248‑1 (MQ=255) cacaACAGATGGCCGGTGTTTCCGCCTGGCTAGCG‑AGTTTGTTCCCCCGGGGGCTGGACGATGAACAACTGCCGCAAATCGCCGGTG‑C‑GCAGATGGTTG‑AATGGTTTTGGTG‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgcg < 2:61278/251‑1 (MQ=255) aacaGATTGCTTGTGTTTCCCCCTGGCTAGCGCAGTT‑GTTCCCCCGTGAGCGGGACGATGAACAACGGACGCAAATCGCCAGGG‑C‑GCAGAGGTCTG‑AATGTTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGt < 1:43268/161‑1 (MQ=255) aacaGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGGACGCGCTGGAAAACCGt > 2:43268/1‑161 (MQ=255) agatggccggtttttacgccggagtAGCGCATTT‑GTTCTCCCGTGAGCGGGACGATGAACAAATGACGCAAATCGCCAGGG‑C‑GAAGAGGGTGG‑AATGTTTTTCGTT‑GCTGAAAACCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTg < 2:172683/227‑1 (MQ=255) aTTGCCTGTGTTTACGCCTGGCTGGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGGG‑C‑GAAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGcc < 1:195330/251‑1 (MQ=255) gCCTGTGTTTACGCCTGGTTAGCGCTGTT‑GTTCTCCCGTGAGCTGGACAATGAACAACGGACGAAAATCGCCGGTG‑C‑GCAGATGCCTG‑AAGGGTTTTCGTT‑GCGAAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGt < 1:275525/250‑1 (MQ=255) cctgacttttagcctagatAGCGCAGTT‑GTTCTTCCGCGCGCTGGACGATGCACAACTGACGCCACTCGCCGGTG‑G‑GAAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAAAGAGATGGAGACCCGAATTGCCACTCTTCAAGAACGTGAGGATGCCCGTCTGGGACTTGCCGCGGCCTTTTGCGGTCTGTTTCTGATGACCGACAAACAAGCGgcgccgcggga > 2:300552/19‑243 (MQ=255) cGCCTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCt > 1:140103/1‑251 (MQ=255) gggCTGGCGCAGGT‑GTCCCCCGGTGAGCGGGACGATAAACACCGGACGAAAATCGCCGGTG‑C‑GCAGAGGGTTG‑AATGGTTTTCGTG‑TATAAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACGGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAGCAAGCGGCGCTGCCGTATGCATCTGCCTACaa < 2:406226/250‑1 (MQ=255) ggCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGGATGCATCGGCCTACaa > 1:337524/1‑250 (MQ=255) gtcaggagcggtgttgctcCCTTGAGCTGGACGTTGACAAAGTGACGCAAATGGCCAGTG‑C‑TCAG‑TGGGTGGATTGTTTTTCGTT‑TCTGAAAACCTAACCGCCTCTCACTGCGGCTGTGAACTAGCGGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACAGGCCTCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACaaa < 1:274362/235‑1 (MQ=255) aGCGCAGTT‑GCTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑ACTGGTTTTAGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGGGCACGAGCTGGCAAACAGTATTGCCCCGCTGCCAGTCCGTGACGCTGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTCGTGCCCGACAAACAAGCGGCCCTGCCGGATGCATCAGCCTAccatcagg > 2:202898/1‑244 (MQ=255) gcgcAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGCTGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAgg > 1:385566/1‑250 (MQ=255) cgcAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGCAAACCGTATTGCCACGCCGACAGTACGTGACGATGCCCGCCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTTGTGACCGCCAAACAAGCGGCGCTGCCGTATGCATCGGGCTCCAAACAGGAc > 1:346700/1‑251 (MQ=255) cgcAGTT‑GTTCACCCGTGAGCTGGACGCTGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGAGGGGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGAGACGATACACGTCTGGCAATGGCCGCGGGCATTTGCGGCCTGGTTATGATGACCGACAAACAAAGGGAGCTGTCGTAATCATCGGGCTACAAAAAGGa > 2:261308/1‑250 (MQ=255) ttCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAACTGGAAAAACGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAAATGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGGCAAACAAGCGGCGCTGGCGGATGCATCGGCCTACAACCAGGACGAGCa > 1:281377/1‑248 (MQ=255) cccGTGAGCTGGACGATGAACAACTGACGAAAACCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACAAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAgaga < 1:74397/249‑1 (MQ=255) tggAGCTGGACGAGAAACAACTGACGCAAA‑CCCCCGTG‑CCGAAGATGGCTG‑AAGGTTTTTCGTT‑GCGGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTg < 2:329293/150‑1 (MQ=255) gTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTg > 1:329293/1‑152 (MQ=255) ggctggagtaTGAACAACTGCCGCAAACCGCC‑GTGGC‑GCAGAGGGCTG‑AAGGGTTTTCGTT‑TCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGc < 1:312127/242‑1 (MQ=255) gATGAACAACTGACGCAACTCGCCAGTG‑C‑GCATATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGAATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCCCGGACTTTTGCGGCCTGTTTCTGATGAACGACAAACAAGAGGCGCTGCCGTATGCATCGGCCTACCAACAGGACGAGCAAGAGCATAAACGCTTGGTAGt > 1:320406/1‑251 (MQ=255) aacaccTGACGAAAATCGCCAGTG‑C‑GCAGAGGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCtgatga < 1:52775/174‑1 (MQ=255) aacaacTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGGTAGTTg > 1:216142/1‑249 (MQ=255) aacaacAGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGCACTGGCCGCCGACTTTTGCGGCCTGTTTCtgatga > 2:52775/1‑174 (MQ=255) gCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGGACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGGATAAACGATTGGTAGTTGAGGCAGGGaagg > 2:368937/1‑248 (MQ=255) cgctaGTG‑C‑GCACATGGCGG‑AGTGTTTTTCGTT‑GCTAAAAACTGACCCGCCGCTCACTGCGGCGGTGAACGATCTTGATAACCGTCTTGCCACGCTTACAGTCCGTGACGATGCCCGTCTTGTACTGTCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTTTGCATCGGCCTACACACAGGACGAGCATGAGATTAAACGCTTGTTAGTTTAGGCatggctgttaccca < 2:120027/247‑14 (MQ=255) g‑AATGGTTTTGTTT‑GCTAAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAAc < 1:97846/250‑1 (MQ=255) aattGGTTTTCGTT‑TCTAAAAAACAAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAAcc < 1:260703/248‑1 (MQ=255) agatggttttggtggttaaaaaACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAAc < 2:349038/232‑1 (MQ=255) aTGGTTTTCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCgg < 1:247792/251‑1 (MQ=255) tttCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGCAATGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGCCTTTTTCGGCCTGTTTCTGATGACCGGCAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGCCGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCCGGGATGGAAACCAGCGGCCATTTTAACGAACCGGc > 2:239016/1‑247 (MQ=255) ttCGTT‑GCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAggg > 1:336656/1‑214 (MQ=255) gtGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGc < 2:303423/250‑1 (MQ=255) aaaaACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGat > 1:4176/1‑251 (MQ=255) | GGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCG‑TCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTT‑GTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTG‑C‑GCAGATGGCTG‑AATGGTTTTCGTT‑GCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGAT > NC_000913/1061691‑1062181 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |