| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,529,039 | C→T | G402D (GGT→GAT) | sgcC ← | putative PTS enzyme IIC component SgcC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,529,039 | 0 | C | T | 98.2% | 185.9 / NA | 57 | G402D (GGT→GAT) | sgcC | putative PTS enzyme IIC component SgcC |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (36/20); total (36/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGT > NC_000913/4528797‑4529284 | ggTCGATAACCCAGTTCACCCCCAACTGCGCACCAAAGCCCGGGGCGCCGGGCAATGCACGGAGATGGCACATGGCGATGACCGCTTTTTCCGCCCCAATAACCTCTTTCAGCCACCCCATTGAAAGTCCTCCTTATCCCGATAATTCCCTTTTATGTAAGAAAAGCACACCGCTGGCAACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACat < 2:88640/249‑1 (MQ=255) gATAACCCAGTTCATCCCCAACTGCGCTTCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGc > 1:69220/1‑251 (MQ=255) cccAGTTCATCCACACCTGCGCATAAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCACTAACCTATTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACCATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGCCCAATCGAACATATTGCCCACg > 2:332495/1‑251 (MQ=255) cAGTTCACCCCCAACGGCAAATCAAAACTCGGGACGCCGGTCAATGCCCGTAGAGGGCACATGGCGAGGACCGCTTTCCCCGCCCCAATAACCTCTTTCAGCAAACTCATGGAAAGTACTCCTGACACCGAAAATCCACTTTTCCGTAAGAACAGCACGACGCGGGCTACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACAGATTGCCCACGGa < 2:92585/251‑1 (MQ=255) cAACTGCGAATCAAACCTGGGGTCGCCGGCCAAGGCACGTAGATGGCACATGGCGGTGACCGTTGTTTCCGCACCAATACCCTCTTTCAGCCAACGAATGGAAAGTACTCCTTATTCCGATAATCCCCGTTTACGTAAGACCAGCACGACGCTGGCGACAATTCCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTgaga < 2:364848/251‑1 (MQ=255) aaCTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGAt < 1:6127/251‑1 (MQ=255) aCTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAATGTACTCCTTATTCCGATAATTCCCTTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGAtt < 1:9563/251‑1 (MQ=255) cGGGTCGCAGGGCCATGCACGAAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACACCGCCAATAATCCCAAGCGACATCAATTCAGAAATCGCCCAATCGAACATATTGCCAACGGACAACGCTGCGATTTGCGCACTTTCACCgg > 2:320495/1‑251 (MQ=255) gTCGCCGGGCAAAACCCGCAGAGGGCCCATGGCGTTGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACATAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGATATTTGCGCACTTTCACCgcca > 2:314215/1‑247 (MQ=255) ggCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCACCTCATTGAAAGTCCTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATCCCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCGCCGGCAAAACTGaa < 1:84032/251‑1 (MQ=255) cGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAACACTGAAACCGCCttt > 1:138583/1‑251 (MQ=255) tGGCACCTGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCACACTTTCACCGGCAAAACTGAAACCGCCTTTGAgcgc > 1:357060/1‑251 (MQ=255) cAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCtt > 1:258393/1‑213 (MQ=255) aaaaacccTCTTCCAGCAAACCCATAGAAAGTACTCCTTATCCCAATAATTCACGTTTACGAAAAAAAAGCACGACGCGGGCAACAAACCCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACTCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCtt < 2:258393/207‑1 (MQ=255) ccTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATc > 1:159111/1‑251 (MQ=255) ccTCTTTCAGCCAACGCATGGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAAAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATc < 1:7153/251‑1 (MQ=255) ctTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATcagc > 1:334054/1‑251 (MQ=255) gCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGAAGGACg > 1:76740/1‑251 (MQ=255) cTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAat > 2:127754/1‑251 (MQ=255) ttGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAatcatc > 1:157641/1‑251 (MQ=255) gTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATg > 1:430225/1‑251 (MQ=255) gTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATg > 1:452222/1‑251 (MQ=255) cTCCTTATTCCGCTAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGAcc > 2:54944/1‑251 (MQ=255) ccGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTAAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATc > 1:315242/1‑251 (MQ=255) aTTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGACGTAAGGCGCGAACTGGGTGGCGATCAGCAGGAAGGTAATCATCACGATGACCCCGCTTATCAACGTc > 2:18928/1‑251 (MQ=255) tACGTAAGAACAGCCCGCCGCTGGCAACAAACCCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAg < 1:438762/250‑1 (MQ=255) tAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGtctc > 1:8621/1‑251 (MQ=255) tAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGAAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACAATGACCCCGCTTATCAACGTCCTGACCAGGtctc > 1:369247/1‑251 (MQ=255) aaCAGCACGACGCTGACGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGACATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGCCGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCcgcg > 2:183502/1‑251 (MQ=255) cAGCACGACGCTGGCGACACTACCGACCGCCACGACAACGCCAATAATCCCACGCGACATCAATTCAGCAATCGCCCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCCCGATGACCCCGCTTATCAACGTCCAGACCAGATCTCCGCggg > 2:340609/1‑250 (MQ=255) aGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTg > 2:276022/1‑251 (MQ=255) cACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTgg > 1:228540/1‑250 (MQ=255) gacgCTGGCGACAATACCGCCCGACACGACAACGCCAATAATCCCACGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATa > 2:67138/1‑250 (MQ=255) gacgCCGGCGACAATACCGACCGCAACGACACCGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGCACATATTGCCCCCGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTACGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATa > 2:448710/1‑250 (MQ=255) ccgtagcccacaaaccccaccgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCAAACATATTGCCCACGGACACCGCTGAGATTTGCGCACTTTCCCCGGCAAAACTGAAACCGCCTGTGAGCGCCAGTTCAGTGAAGGAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACTATGACCCCGCTGATCAACGTCCTGACCAGGTCTCCGCGGTGGATAAc < 2:398180/233‑1 (MQ=255) cgCTGGCGACAATCCCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAAcc < 1:18928/251‑1 (MQ=255) ggCGAAAAAACCGACCCCCACGACAACGCCAAAAACCCCAAGCGACATGAATTCAGAAATCGACCAATCGAACAGATTGCCCACGTACATCGGGGAGATTTGCGCGCTTTCCCCGGCAAAACTGAAACCGCCTTTGAGCGCCATGTCATTGAAGTAAGGCGCGAGCTGTGTGTCGATCGGCGGGTCGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAg < 1:434801/251‑1 (MQ=255) gagacaaccccgcccgCCACGACAACGCCAATAAACCCAAGCGACAACAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGTTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCCATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGGCGCCGCGGTAGATATCCGTAGc < 2:315242/238‑1 (MQ=255) gACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGcc > 1:92274/1‑250 (MQ=255) aaTACCGAACGCCACGACAACGCCCATAATCCCAAGCGACATCAATTCCGAAATCGACCAATAGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGCAACCGCCTTTGAGAGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGCCGGCAATCATCCCGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGAAGCCATAc > 2:397374/1‑251 (MQ=255) accccacccgCCACCAAAACGCCAATAACCCCAAGCGACATCAATTCAGAAATCGACCAACCAAACAAATGGCCCCCGGACAACGTTGAGATTTGCTCACTTTCTCCGTCAAAACTGAAACCGCCGTTGAGCGCCTTTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCTGCATTACGGTAATCATCACGATGACCCCGCTTAGCAACGTCCTGACCAGGTCGCCGCTGGGGAGAACCGTAGTCATACa < 2:413337/244‑1 (MQ=255) tACCGACCGCCACGACAACGACAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATAc > 1:369508/1‑249 (MQ=255) gaccgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATaa < 2:213417/251‑1 (MQ=255) accgCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATaaa < 1:276022/251‑1 (MQ=255) gACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGACCGGTg > 1:2906/1‑251 (MQ=255) taatCCCAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGCCCAGGTCTCCGCGGTGGATAACCGTAGCCATCCAGATAAAGAACGGTGCTACCGGCAgg > 2:170478/1‑251 (MQ=255) ccAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGc < 1:157314/251‑1 (MQ=255) ccAAGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGGCTgg > 1:386532/1‑250 (MQ=255) aaGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGGCTGCgg > 2:335516/1‑250 (MQ=255) aGCGACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGCTAAAGAACGGTGCTACCGGCAgggttgcggg > 2:291707/1‑243 (MQ=255) gACATCAATTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAgggg > 1:368902/1‑251 (MQ=255) cAATACAGAAAGCGACCAATCGAACAGATGGCCCACGGACACCGCTGAGATTGGCGCACTCTCACCGTCAAAACAGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTACGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAac < 1:314215/250‑1 (MQ=255) aaTTCAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAgggggaaacc > 2:147673/1‑245 (MQ=255) cAGAAATCGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACttt < 1:30887/250‑1 (MQ=255) cGACCAATCGAACATATTGCCCGCGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCg < 1:211053/251‑1 (MQ=255) cGACCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCg < 1:248408/251‑1 (MQ=255) aCCAATCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGCGTGTGGGGGGCAACACTTTGTTGCCCggg > 2:137070/1‑250 (MQ=255) | TGTCGATAACCCAGTTCATCCCCAACTGCGCATCAAAACTCGGGTCGCCGGGCAATGCACGTAGATGGCACATGGCGATGACCGCTTTTTCCGTCCCAATAACCTCTTTCAGCCAACTCATTGAAAGTACTCCTTATTCCGATAATTCACGTTTACGTAAGAACAGCACGACGCTGGCGACAATACCGACCGCCACGACAACGCCAATAATCCCAAGCGACATCAATTCAGAAATCGACCAACCGAACATATTGCCCACGGACAACGCTGAGATTTGCGCACTTTCACCGGCAAAACTGAAACCGCCTTTGAGCGCCATTTCAGTGAAGTAAGGCGCGAACTGGGTGGCGATCAGCAGGACGGTAATCATCACGATGACCCCGCTTATCAACGTCCTGACCAGGTCTCCGCGGTGGATAACCGTAGCCATACAGATAAAGAACGGTGCTACCGGCAGGTCTGCGAGGGGTAACACTTTGTTGCCCGGT > NC_000913/4528797‑4529284 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |