| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 784,677 | G→A | A49A (GCC→GCT) | zitB ← | Zn(2(+))/Cd(2(+))/Ni(2(+))/Cu(2(+)) exporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 784,677 | 0 | G | A | 95.7% | 74.9 / NA | 23 | A49A (GCC→GCT) | zitB | Zn(2(+))/Cd(2(+))/Ni(2(+))/Cu(2(+)) exporter |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (12/10); minor base C (1/0); total (13/10) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAGGGCTATGGCATTCACAAACGCCGCGAGCGTGGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGACATCATACTGCTTTTAGAAGTGAAAAATTAAAAGGGAGAGACTCCGCTCTCCCATTAT > NC_000913/784439‑784920 | cGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAGGGCTATGGCATTCACAAACGCCGCGAGCGTGGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCAGCCAGCAATGcc > 1:377574/1‑251 (MQ=255) atGCCGCCCTCGACCGGACGCGGCGGGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGAAATTACCACGAGGGCTATGGCATTCACAAACGCCACGAGCGGGGTCAGTCTTAGCCAACCGAAAGTGTGGAGAATGGTGGGAGGACGACGTGAAAATTGCACGGAGAGTAGGGCGAAAAGCAGGGCGGAAGAATCGGTCAAAATATGACCCGCATCAGCCAGCCAGGCCAGAGAACCagaaagaa > 2:8781/1‑250 (MQ=255) cGACCGGACGAGGCGGGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAGGGCTATGGCATTCACAAACGCCGCGAGCGTGGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAGCCCCCaa < 2:204594/249‑1 (MQ=255) gTTCTATCGCCTCCCAGCCAATCAAAATGGCAATTACCACGAGGGCTATGGCATTCACAAACGCCGCGAGCGTCGTCAGTCTTAGCCCACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAACGCAGGGCGCCAGTATCGGACAACATATGCCCCACATACGCCAGCCATGCCAGAGAACCAGACAGCAAACACCCAACCACTCCTAccccaatacaccccgcc > 2:83519/1‑236 (MQ=255) cGCCTCCCAGACAATCAAAATGGTAATTACCACGAGGGCTATGGCATTCACAAACGCCGCGAGCGTGGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGc > 1:123500/1‑251 (MQ=255) tCCCAGACAATCAAAATGGTAATTACCACGAGGGCTATGGCATTCACAAACGCCGCGAGCGTGGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATTGGTCAACATATGACCCGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGa > 1:140786/1‑250 (MQ=255) cccAGACAATCAAAATGGTAATTACCACGAGGGCTATGGCATGCACAAACTCCGCGAGCGTGGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGTGCGGCAGTATCGGTCAACATATGACCCGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGaa < 1:306357/250‑1 (MQ=255) acaaacaaAAGGGTAGATACCACGAGGGCTATGGCAGTAACAAACGCCGCGAGCGTGGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCCCGGCGAGTAGGGCGAAAAGCAGGCCGGCAGTATCGATCAACATACGACCCGCATCAGCCAGCGATGCGAGAGAACCTTAAACAAAACCTCCAACGAATTCGACCAGCAAAAACCCGTCATTCACTCCGGAAGCATa < 2:41851/251‑1 (MQ=255) cAATCAAAATGGTAATTACCACGAGGGCTATGGCATTCACAAACGCCGCGAGCGTGGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTGCTACCAGCATAAACCCGGCAGGCACGCCGAAAGCATac < 2:377574/251‑1 (MQ=255) ttCAACATGGTAATTACCACGAGGGCTATGGCATTCACAAACGGCGCGAGCGTGGTCGGTCTAAGCCAACCGAGAGTGTGGCGAAGGGTGGGAGGACGACGTGAAAATTGCACGGCAGGTCGGGCGAGAAGCAGAGCGGCAGTAGCGATCAGCGTATGCCCCGCATCAGCCAGCAGTGCCATGGACCCAGGAAGAAAACCCCCAACAACTTCAACCAGCATAACCACGGCGGTCACGCCGAAAGccaaca > 2:122563/2‑245 (MQ=255) tACCACGCGGGCTATGGCATTCACAAACGCCGAGAGCGAGGTCAGTCTTAGCCAACCGAAAGTGAGGGGAATGGTGTGAGGACGACGTGAACATTGCACGGAGAGAAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCAGCCAGCAATGCACGAGAACCAGAAAGAAAACCACCAAAGACTTCTACCAGCATAAACCCGGACGTCACGCCGAAAGCATACAACAAGCGACTAGCat > 2:22055/1‑251 (MQ=255) ggCATTCACAAACGCCGCGGGTGGGGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCa < 1:83519/251‑1 (MQ=255) aGCGTGGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTgtgtga < 2:100910/251‑1 (MQ=255) gtgGCGAATGGAGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGAGTGCGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCt > 2:127271/1‑251 (MQ=255) gAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGCGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCAACCCTTAatt > 2:11336/1‑251 (MQ=255) aaaaGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGACATCATACTGCTTTTAGAAGTGa > 1:18140/1‑250 (MQ=255) aaaGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGACATCATACTGCTTTTAGAAGTGaa > 1:373024/1‑250 (MQ=255) gCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACt > 1:35540/1‑217 (MQ=255) gCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACt < 2:35540/217‑1 (MQ=255) cAACATATGACCCGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAGGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGACATCATACTGCTTTTAGAAGTGAAAAATTAAAAGGGAGAGACTCCGc < 2:109215/251‑1 (MQ=255) cAACATATGACCCGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTACCTTTATGACATCATACTGCTTTTAGAAGTGAAAAATTAAAAGGGAGAGACTCCg < 2:89981/250‑1 (MQ=255) tGACCCGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTAACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGCCGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGACATCATACTGCTTTTAGAAGTGAAAAATTAAAAGGGAGAGACTCCGCTCTccc > 1:302883/1‑250 (MQ=255) ccGCATCAGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGACATCATACTGCTTTTAGAAGTGAAAAATTAAAAGGGAGAGACTCCGCTCTCCCattat < 1:11336/251‑1 (MQ=255) | CGGCAATTGCCATCATCATGCCGCCCTCGACCGGACGCGGCGTGCGGAAGCGTTCTATCGCCTCCCAGACAATCAAAATGGTAATTACCACGAGGGCTATGGCATTCACAAACGCCGCGAGCGTGGTCAGTCTTAGCCAACCGAAAGTGTGGCGAATGGTGGGAGGACGACGTGAAAATTGCACGGCGAGTAGGGCGAAAAGCAGGGCGGCAGTATCGGTCAACATATGACCCGCATCGGCCAGCAATGCCAGAGAACCAGAAAGAAAACCACCAACGACTTCTACCAGCATAAACCCGGCAGTCACGCCGAAAGCATACAACAAGCGACGAGCATTATTATCTTCTGGCAGGTGTGAGGACGTGTGTGAGTGTGAGTGCGCCATGACGAGTCATCCCTTAATTATTCTCACTTAACTTTATGACATCATACTGCTTTTAGAAGTGAAAAATTAAAAGGGAGAGACTCCGCTCTCCCATTAT > NC_000913/784439‑784920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |