| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,560,119 | A→G | intergenic (+253/+503) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,560,119 | 0 | A | G | 98.7% | 217.3 / NA | 75 | intergenic (+253/+503) | rtcR/glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (33/41); minor base T (1/0); total (34/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
GTGGTCCGTCAGCACCTGCATCACGCTTACTGGCGGCGGGGCGTCGGTGTAGACGGCATCTACCATGCTGATGCTGCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGAACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCG > NC_000913/3559872‑3560364 | gtggtCCGTCAGCACCTGCATCACGCTTACTGGCGGCGGGGCGTCGGTGTAGACGGCATCTACCATGCTGATGCTGCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACt < 1:366475/251‑1 (MQ=255) gTCAGCACCTGCATCACGCTTACTGGCGGCGGGGCGTCGGTGTAGACGGCATCTACCATGCTGATGCTGCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGAGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGgagct > 1:54970/1‑249 (MQ=255) aTCACGCTTACTGGCGGCGGGGCGTCGGTGTAGACGGCATCTACCATGCTGATGCTGCCCATATTGACCATCGCGTTCCGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGATCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGGGATAAAATCGAgagg > 1:457397/1‑248 (MQ=255) cGCTTACTGGCGGCGGGGCGTCGGTGTCGACGGCATCTACCATGCTGATGCTGCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTTGGAGATAAAATCGAGCGTCGCt < 2:138193/251‑1 (MQ=255) ttACTGGCGGCGGGGCGGCGGTGTAGACGGCATCTACCATGCTGATGCTGCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGCACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGGCTGGGAGGTAAAAACGAGCGCCGCTTCg > 2:137649/1‑251 (MQ=255) tccTGGCGGCGGGGCGTCGGTGTAGACGGCATCTACCATGCTGATGCTGCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCg < 2:4499/248‑1 (MQ=255) tACTGGCGGCGGGGCGTCGGTGTAGACGGCATCTACCATGCTGATGCTGCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCg < 1:154851/250‑1 (MQ=255) ggcggcGGGGCGTCGGTGGAGACGGCATCTACCATGCTGATGCTGCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAAACGacgggcgctttgccact > 2:358727/1‑235 (MQ=255) gcggGGCGTCGGTGTAGACGGCATCTACCATGCTGATGCTGCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCCAGCGTCGCTTCGCCAATGATc > 1:312103/1‑251 (MQ=255) ggTCGGTGTAGACGGCATCTACCATGCTGATGCTGCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCa < 1:295789/250‑1 (MQ=255) gtcggtgtggccgtcagcttccATGCGGATGCTGCCAATATTAACCATCGGGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGGGGCGCGAGTTCTCAATATTGGCGGGTTTGGTGCGAACTGCGTGGTAATCGAACGCCAGCAGCGGGCCGTCGCTATCGATGCCGCTTAGCCCCAGAATGCGGAAATCAAGGCGGGACTGGGAGATAAAATCGGGCGGCGTTTCCCCATTGTTCCCGCCAt < 2:385275/231‑1 (MQ=255) cGGTGTAGACGGCAGCTACCATGCTGATGCTGCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGGCGCTATCGATGCCTCTTATCCCCAGAATGCCGAAATCAAGGCGGGACGGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATcg < 1:440970/251‑1 (MQ=255) ggTGTAGACGGCATCTACCATGCTGATGCTGCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCATTGAGCCCGCCATcgc < 2:457397/251‑1 (MQ=255) ggTGTAGACGGCATCTACCATGCTGATGCTGCCCAGATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCTAACGCCAGCAGCGAGCCGTCGCTATCGATGCCTCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATcgc < 2:461525/251‑1 (MQ=255) gACGGCATCTACCATGCTGATGCTGCCCATATTGCCCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGCCTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGc > 1:122341/1‑251 (MQ=255) cATGCTGATGCTGCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGCATGGGGGATAAAAACGGACGGCCGTTCGCCAATGATTCCGCCCTTGCGG‑CGGCGTAATTCGCCAc > 2:147844/1‑251 (MQ=255) atgctgatgctgCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGGCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCAcc < 1:31735/251‑1 (MQ=255) gatgctgCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGCTCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAAGGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCga < 1:93206/251‑1 (MQ=255) gatgctgCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGAGCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTAGCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTTGGAGATAAAATCGAGCGTCGCTTCGCCAATGAGCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGc < 1:430484/249‑1 (MQ=255) gatgctgCCCATATTGACCATCGCGTGACGGCCAAATTTCGAGTGAGCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCTATCGTCGTGTTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCTGAAATCAAGGCTGGACTGGGAGATAAAATCGAGCGTCGCGTCGTCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCg < 2:233627/250‑1 (MQ=255) tgcCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAAACAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCATCAGCGAGCCGTCTCTATCGATCCCGCTTATCACCAGAATGCCGAAATCAAGGCGGGTCTGGGAGATAAAATCTAGCGTCGCTTCCCCAATGATTCCGCCACCGCGG‑CGTCGTAATTCGCCAACCGCGTGAa‑tg > 2:351954/1‑251 (MQ=255) gcCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAa‑tg < 1:267588/250‑1 (MQ=255) ccATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAa‑tgatg < 1:391999/251‑1 (MQ=255) atTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGaa < 2:123134/251‑1 (MQ=255) tGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGGGTGGCTTCGCCAAGGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGGGAA‑TGATGCggaa > 1:289571/1‑247 (MQ=255) cagcgccttACGGCCAAAGTTCGAGTGATCGACATCCAGCATAACGTGGCTCTAGTTCGCAATAATGGCGCGTATGGTGCGAACTCCGTGGTAATCGACCTCAAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGTCTGGGAGATAAACTCGAGCGTCGCTTCGACAATGATCCCGCCATCGCGG‑CTGCGTAATGCGCCACCGGCGAGAA‑TGATGCGAAAAtcta < 2:252380/244‑2 (MQ=255) aTCGCGTTACGGCCCAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGGGGTAAAATCGAGCGTCGCTTCGCCAATGATCCCCCCATCGCGG‑CTGCGGAATTCGCCACCCGCGGGAA‑TGATCCGAAAAtcttc > 2:417205/1‑251 (MQ=255) cgcgTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATcttctt > 1:175515/1‑251 (MQ=255) cgTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCCTCGCGG‑CTGCGTAATTCGCCACCCGCGAGGA‑TGATGCGAAAATCCTCtttt > 2:325602/1‑251 (MQ=255) aCGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGCGAA‑TGATGCGAAAATCTTCTTTTAccc > 1:440255/1‑250 (MQ=255) ggCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATc < 1:143723/251‑1 (MQ=255) gCCAAATTTCGAGTGATCGCCAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGGCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATc > 1:133574/1‑250 (MQ=255) cAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAAc > 1:237184/1‑251 (MQ=255) aaTTTCGAGTGATCGACAACCAGCATAACGTGGCGAGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCGATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGAGCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCACCgt < 2:428389/251‑1 (MQ=255) aTTTCGAGTGATCGAAAACCAGCATAACGTGGCTCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCGAGCAGCGAGCCGTCGCTATCGATGCCGATTATCCCCAGAATGCCGAAATCAAGGCTGTACTGGGGGATAAAATAGAGCCTCGCCTCGCCAATAATCCCGCCATCGCGG‑CATCGTAATTCGCCACCTGCGTGCA‑TGATGCGAAAAtatttcttttccagtaacctt > 2:62183/1‑231 (MQ=255) aGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCa < 1:29601/251‑1 (MQ=255) ggATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAAGGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAAc < 1:136893/250‑1 (MQ=255) gATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTGGGGGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAACCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAAc < 2:157878/250‑1 (MQ=255) gACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGGGAAAAAATCGAGCGGCGCTTCGCCAATGCTCCCGCCATCGCGG‑CTGCGGAATTCGCCACCGGCGGGGA‑AGATTCGGAAATCTTCTTTTACCATCaaactggttacaacgttgg > 2:357472/1‑234 (MQ=255) cAACCAGCATAACGTGGCGCGAGTTCTCAATAAGGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGAGCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTgaga < 2:340752/251‑1 (MQ=255) cAGCATAACGGGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGAttgt < 2:248767/251‑1 (MQ=255) cATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTgg < 1:325602/251‑1 (MQ=255) aTAACGTGGCGCGAGTTCTCAATACTGGAGCGTTTTGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGCGCCGTCGCTATCGATGCTGCTTATCCCCAGAATGCCGAAATCAAGGCGGGGCACGGATATAAAATACAGCGTCTCTTCGCCCATGATCCCGCCATCGTGGACT‑CGTAATTCGCCACCGGCGCGAACTG‑TGCGTAAATCTTCTTTTCCCCTCAACGTGTTTGCAACGTTGATATTGTTGGt > 2:120458/1‑251 (MQ=255) cGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGGGTTAGCAACGTTTAGATTGTTGGTG‑Ac > 1:231849/1‑250 (MQ=255) gcgcGAGTTCTCAATAATGGCGCGTTTGGTGCGAACGTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATgc < 1:199510/251‑1 (MQ=255) ttCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCAGAAATCAAGGCGGGACTGGGAGATAAAATAGAGCGTCGCTTCGCCAATGATCCCGCCCTCGCGG‑CTGCGGAATTCGCCACCGGCGAGAA‑TGTAGAGACAATCTTCTTTTACCATCCACGTGTTAGCAACGTTGTGACTCGTGGAG‑ACAATgcgaaacat > 2:165671/1‑245 (MQ=255) tcAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGGGCGTCGCTTCGCCCATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGGGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGGGTTAGCAACGTTGAGATTGTTGGGG‑ACAATGCGCAAATTGCt > 1:435030/1‑251 (MQ=255) ggCGCGTTTGGTGCGAACTGCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTCTCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACATTGCGCAAATTGCTGTGATTGa < 2:11769/251‑1 (MQ=255) cgcgTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCCTCCACGGGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGc > 1:434311/1‑251 (MQ=255) ttGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAgtg < 1:452185/250‑1 (MQ=255) gAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTCTCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGGCTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTCATTCGCCACCGGCGAGAC‑TGGTGCGAAAATCTTCTTTTACCCTCAACGCTTTAACAAAGATGAGAATGTTGGGG‑ACAATTCGCAAATTGCTGTGATTTAGCAGGGCGTgcgcc > 2:280049/1‑250 (MQ=255) tCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTAcc < 1:244509/249‑1 (MQ=255) aaTCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGc < 1:34115/251‑1 (MQ=255) cGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCgtg < 2:100918/251‑1 (MQ=255) gAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCgtgg < 2:124111/251‑1 (MQ=255) gAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGACGCTTCGCCAATGATCCCGCCATCGCGG‑CGGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGGGGTTGTTGGTG‑GCAATGCGCCAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCGTCCGGCgtgg > 2:89730/1‑251 (MQ=255) aacgccAGCAGCGGGCCGTCGCTATCGATGCCGCTTAGCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCgtggt < 2:398617/247‑1 (MQ=255) cagcagCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCg > 2:35421/1‑250 (MQ=255) gcGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCg < 2:414424/251‑1 (MQ=255) gAGCCGTCGCGATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGCCTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGGTAGCAACGTTGATATTGTTGGTG‑ACAATTCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGAt > 2:100647/1‑251 (MQ=255) gTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGT‑CTGCGTAATTCGCCACCGGCGATAA‑TGATGCGAAAATCGTCTTTTACCATCAACGTGTTAGCAACGTTGAGATGGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCATTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACa < 1:47820/251‑1 (MQ=255) cGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGc > 1:119493/1‑251 (MQ=255) cTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATACCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGCA‑TGATGCGAAAATCTTCTTTTACCATCCACGTGTTAGCAAAGTTGAGATTGTTGGTG‑ACAAGGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGATTCCGGCGTGGTGCCGATATCGAGAAACAGCg > 1:243648/1‑250 (MQ=255) cGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATTAAATCGCGCGTCGCTTCGCCAATGATCCCGCAATCGCGG‑CTGCGTAATTAGCCACCGGCGAGAA‑TGATGCGACAATCTTCTTTTACCATCACCGTGTTAGAAACGTTGCGATTGTTGGTGTACA‑TGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCCTGGTGCCGATATCGCTAAAACGCGTCg > 1:304070/1‑249 (MQ=255) aTGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGcc < 1:35421/251‑1 (MQ=255) aTGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCCCGCGTCGCTTCGCCAATGATCCCGCCCTCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAACCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTctggcc > 2:339033/1‑246 (MQ=255) ggCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCa < 2:74347/250‑1 (MQ=255) gCTTATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGGTAATCAGCGTCTAGCCATTgg < 2:240062/251‑1 (MQ=255) ttATCCCCAGAATGCCGAAATCAAGGCGGGACTGGGAGATAAAATTGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAAATCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCCGCGAGGTGCCGATATCGATAAACAGCGTCGAGCCATTgggg > 2:165982/1‑251 (MQ=255) aaTGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGGGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGCTTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCCGTGCGTGCGCTACCGCTTCCGGCGTGGCGCCGCTATCGATaa > 1:222827/1‑221 (MQ=255) aaTGCCGAAATCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGAGCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCAGCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATaa < 2:222827/221‑1 (MQ=255) tCAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTATTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCCCTTTGCg > 1:338180/1‑251 (MQ=255) cAAGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGTGATTTGCTCCGCCACTTTGCgg < 1:345694/251‑1 (MQ=255) aaGGCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGGGCCATTGGGGATTTGCTCCGCATCTTTGCggg > 2:122985/1‑251 (MQ=255) ggCGGGACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCg < 1:139204/251‑1 (MQ=255) | GTGGTCCGTCAGCACCTGCATCACGCTTACTGGCGGCGGGGCGTCGGTGTAGACGGCATCTACCATGCTGATGCTGCCCATATTGACCATCGCGTTACGGCCAAATTTCGAGTGATCGACAACCAGCATAACGTGGCGCGAGTTCTCAATAATGGCGCGTTTGGTGCGAACTTCGTGGTAATCGAACTCCAGCAGCGAGCCGTCGCTATCGATGCCGCTTATCCCCAGAATGCCGAAATCAAGGCGGAACTGGGAGATAAAATCGAGCGTCGCTTCGCCAATGATCCCGCCATCGCGG‑CTGCGTAATTCGCCACCGGCGAGAA‑TGATGCGAAAATCTTCTTTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTG‑ACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGGTGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCG > NC_000913/3559872‑3560364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |