| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,938,441 | Δ1 bp | coding (215/993 nt) | rbsR → | DNA‑binding transcriptional dual regulator RbsR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,938,441 | 0 | C | . | 98.4% | 272.5 / ‑2.2 | 61 | coding (215/993 nt) | rbsR | DNA‑binding transcriptional dual regulator RbsR |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base . (31/29); total (31/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.54e-01 | |||||||||||
GACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGAT‑GTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATCCTTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGAC > NC_000913/3938197‑3938685 | gACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGAT‑GTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTAt < 1:344272/251‑1 (MQ=255) aCGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGATTGTT‑CCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGGTATCAATAAAGATCGCTTCGGCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAAGTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTAtt < 2:405626/251‑1 (MQ=255) tAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGAT‑GTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTgg > 1:348808/1‑251 (MQ=255) ggCAGAGGTGACGCTTGGCTACAATGAAAGAT‑GTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGCTCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTg > 2:116795/1‑251 (MQ=255) ggCAGAGGTGACGCTTGGCTACAATGAAAGAT‑GTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTg < 1:95510/251‑1 (MQ=255) agGTGACGCTTGGCTACAATGAAAGAT‑GTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGtt > 2:102493/1‑251 (MQ=255) gACGCTTGGCTACAATGAAAGAT‑GTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCACTAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCCATC‑TTTCTCTTCAGACATGGTGCGTGGCGTTGAAc > 1:392235/1‑251 (MQ=255) tGGCTACAATGAAAGAT‑GTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGGGAA‑GCGATTGCCGCCAAAGGTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCGATTCAGAACTGGTGCGTGGCGTTGAACGCAgc < 1:237983/250‑1 (MQ=255) cTACAATGATAGAT‑GTTGCCGGCCTGGCGGTCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGGGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATATGCTCTGCCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCCGTACCAATC‑TTTCTATTCAGAACTGGTTCGGGGCGTTTGACGCCgctgct > 2:141129/1‑251 (MQ=255) tACAATGAAAGAT‑GTGGCCCGACTGGAGGGCGTTTCTACCTCCACAGATTCTAACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGCAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGAGTAGCCAAAAACTTAATAAAACACACACCATTGGCATGTTGATCACTGCCAGTAACAATC‑TTTCTATTCAAAACTGGTGCGAGGCGTTGAACGCAGCTGCtt > 2:298036/1‑251 (MQ=255) aCAATGAAAGAT‑GTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTc < 2:70426/251‑1 (MQ=255) gAAAGAT‑GTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAAc < 1:311215/250‑1 (MQ=255) tGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTtata < 2:124185/250‑1 (MQ=255) gCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGCTTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCg > 1:233188/1‑251 (MQ=255) ggcgggcgTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTcc < 1:126036/250‑1 (MQ=255) gggcgTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTg < 1:10664/251‑1 (MQ=255) ttCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATAc > 1:359454/1‑251 (MQ=255) tCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATAc < 1:462753/250‑1 (MQ=255) aCCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATAcc < 1:129260/248‑1 (MQ=255) cAACATTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑TCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACCCAATTACGCTCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCAGTGGCATGTTGATCACTGCCAGTACCAATC‑TTGCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCGTTGCAATACCGAAgg < 2:346274/249‑1 (MQ=255) aCAGTGTCTCACGTTATCAATAAAGATCGCTTCGTCA‑TGAAAGCGAGTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATGGGCATGTTGATCACTGCCAGGACCAATC‑GTTCGATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGAt < 2:28920/251‑1 (MQ=255) tttCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCACAGTTGAAGCGGCGGCTAAAGAACTCAATTACGCGCAATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGGTCACTGCAAGTACCAATC‑TTTCTATTCAGAACTGGTGCGAGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGaa > 1:422850/1‑250 (MQ=255) tcACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGACCGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAAAAGCg > 2:56334/1‑251 (MQ=255) cACGTTACCAATAAAGATCGCTTCGTCAGTGAA‑TCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACGCAATTACGCGCCATCAGCGCTGGCGCGTAGCCTCAAACTCAAGCAAACACATGCCATTGTCATGTTGATCACTGCCAGTACCAA‑GCTTTCTATTCAGAACTGGTGCTTTGCGTTGAACGCAGCTGCTTCGAGGGCGGTTACAGTCTCGGCTCGTGCAATACCGAAGGCGATGAACAGc < 2:422850/249‑1 (MQ=255) ttATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATg > 1:136763/1‑250 (MQ=255) cAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTGGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATc < 1:202253/250‑1 (MQ=255) tAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCa > 1:224333/1‑250 (MQ=255) cGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGaa < 1:259428/251‑1 (MQ=255) gCTTCGTCAGTGAA‑GCGATTCCCGCCAACGTTGAAGCGGCGATTACAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTATATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGaa > 2:26302/1‑250 (MQ=255) cGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTTCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCt < 1:235966/251‑1 (MQ=255) gTCAGAGAA‑GCGATTACCGACAAAGTTGAAGCGGCGATTACAGCACTCCATTACGCGCCCTCAGCTCTGGCGCGTCGCCTCAAACTCACTCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTg > 2:32256/1‑251 (MQ=255) tCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTg > 2:201537/1‑250 (MQ=255) aa‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGCAACGCCGATGCaa > 2:263136/1‑250 (MQ=255) aa‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCaa > 1:406027/1‑250 (MQ=255) gCGATTACCGCCACAGTTGCAGCGGCGTTTCAAGGGCTCAATTACGCGCCATGAGATCTGGCACCTAGCCTCAAACCCACTCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGGGGCGTTGAACGCAGCTGCTTCGAACGCGGCTATAGTCTCGTCCGTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCaaaa > 2:41585/1‑250 (MQ=255) aTTACAGCCAACGTTGAAGCGGCGATTAACGGAATCAATTACGCTCCATCAGCCCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGCACAGCGGCTGAGTCGCAATCTGGAACGGCTGCTGCaaaacagc > 2:35263/1‑247 (MQ=255) cAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAAGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATgg > 2:244355/1‑251 (MQ=255) gcaGCGGCGATTAAAGCACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTAAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGCTGAAACGCAATCTGGAAACGCTGATGCAAAAACGCGTTGCTGGCTTGCTg > 2:591/3‑251 (MQ=255) gATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGCTGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACtgtg > 1:105687/1‑251 (MQ=255) cTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACg > 2:232881/1‑251 (MQ=255) aCGCGCCATAAGCTCTGGCGCGTAGCCGCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTTCCAATC‑TTTCTATTCAGAACTGGTGCGGGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTTTGCACCGAAACGCTTCAAc < 2:313674/251‑1 (MQ=255) gcCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATCCCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACGGTGCACCGAAACGCACCATCCTTc < 2:392235/251‑1 (MQ=255) aTCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGaa > 1:33932/1‑153 (MQ=255) aTCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGaa < 2:33932/153‑1 (MQ=255) gCTCTTGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGaa < 1:359348/251‑1 (MQ=255) ctctGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATg < 2:113752/190‑1 (MQ=255) ctctGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATg > 1:113752/1‑190 (MQ=255) cgcgTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGc > 1:438284/1‑251 (MQ=255) aGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACg < 1:127369/250‑1 (MQ=255) gCCTCAAACTCAATCAAACACATACCGTTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAGCGCGGTTATAGTCGCGTCCTTTGCAATACTGAAGGCGATGAGCAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTGCTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGtt < 1:438319/251‑1 (MQ=255) ccTCAAACTCAAGCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TGTCTATTCAGAACTGGTGCGGGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGGCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTa < 1:91659/251‑1 (MQ=255) cacAAACTCAATCAAACACATACCATTCACATTTTGATCACTGCCACTACCAATT‑TTTCTAATCATAACTGGTGCGTGTCTTTGAACGCAGCTTCTGCGAACTCGGTTATAGTCTCGTCCGTTTCAATACCGAAGGCGATTAACAGCGGATGAATCGCAATCTGGAAACGCTGATTCAAAAACGCTTTGATGTCTTGCTGTTACTTTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTAt < 1:223693/249‑1 (MQ=255) cAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATc < 1:32256/250‑1 (MQ=255) aaaCTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCg > 1:433411/1‑251 (MQ=255) tcaatcaaAAAAATACCATTGGCCTGTTGATCACTGCCAGTACCAATC‑TTTCTCTTCCGAACTGGTGCGCGGCGTTGAACGCAGCTGCTTCGACCGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGCTGAACTGCGGATGAATCGCAATCTGGAAACGCTGATGCAACAACCAGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCATCGGTATCCGAc > 2:464582/1‑249 (MQ=255) atcaaACACATACCATTGGCATGTTGAGCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAAGCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGc < 2:349207/251‑1 (MQ=255) ccATTGGCATGTTGATCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGtgatg > 1:84065/1‑250 (MQ=255) gATCACTGCCAGTACCAATC‑TTTCTATTCAGAGCTGGTGCGTGGCGTTGAACGCAGCTTCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGTAACGCTGATGCAATAACGCGTTGATGGCTTGCTTTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGCCAGTGCCTACTGTGATGATGGACTGGGCTc < 1:449484/250‑1 (MQ=255) aTCACTGCCAGTACCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCg < 2:373660/251‑1 (MQ=255) aCCAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCTGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGAc > 1:434519/1‑251 (MQ=255) ccAATC‑TTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATgacgac > 1:244513/1‑250 (MQ=255) | GACGCATTTTTAGACAGGCAGAGGTGACGCTTGGCTACAATGAAAGAT‑GTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAA‑GCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATCCTTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGAC > NC_000913/3938197‑3938685 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |