Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,558,699 Δ6,790 bp intZ[eutA] intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2558699 2565488 6790 52 [0] [2] 54 intZ–[eutA] intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 25586980 (0.000)52 (1.280) 49/466 0.1 100% intergenic (‑19/‑160) eutB/intZ ethanolamine ammonia‑lyase subunit alpha/putative phage integrase IntZ
?NC_000913 2565489 = 0 (0.000)coding (1396/1404 nt) eutA ethanolamine ammonia‑lyase reactivase EutA

ATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCTAAACACGCCCGTTATTCATCACGCCGAACGCGCCGGATACATGATCGGGGTTATCCAGTCGTTAAATCAAGGTATCCGGTTTTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGACAAGCCCTATAAACTCACCGATT  >  NC_000913/2558453‑2558933
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                           
aTCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGCTGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGCACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACACTGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaat                                                                                                                                                                                                                                        >  2:205264‑M1/1‑246 (MQ=255)
                         tgtaggcataccccggattattggggAGGCCCGCTACGTTCTTTTCCGACAACGCCTCCTTTGCCGCCACGCGCTCTTGTGACCTTGCCGCGGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggc                                                                                                                                                                                                                <  1:381046‑M1/238‑30 (MQ=255)
                          aTAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcac                                                                                                                                                                                                              >  1:370800‑M1/1‑220 (MQ=255)
                             ggaaatcaCCGGATTTTGGGGGATGTCCGCTGCGGTCCTTTCCGACAACCCCTGCTTTCCCCCCCCGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaac                                                                                                                                                                                                           <  2:338714‑M1/248‑35 (MQ=255)
                             ggCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaac                                                                                                                                                                                                           >  1:304907‑M1/1‑217 (MQ=255)
                               cAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccg                                                                                                                                                                                                         >  2:126974‑M1/1‑215 (MQ=255)
                                       ggATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcc                                                                                                                                                                                                  >  1:144481‑M1/1‑207 (MQ=255)
                                        gATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGCGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcca                                                                                                                                                                                                 >  1:206992‑M1/1‑206 (MQ=255)
                                        gATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcca                                                                                                                                                                                                 >  1:434685‑M1/1‑206 (MQ=255)
                                               gCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagagg                                                                                                                                                                                         >  1:293418‑M1/1‑199 (MQ=255)
                                                  gatgcccgccggggcctttcccgacaacccctgctttcccgcCCCCCGCCCCTGGGAGCTTGCCGCTCCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgt                                                                                                                                                                                      <  2:144481‑M1/231‑56 (MQ=255)
                                                   gtgtcgcctacgttcATTTCCGACAACCCCTGCTTGGCCCCCCCGCGCCCCGGTTAGCGTCCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgta                                                                                                                                                                                     <  2:367196‑M1/244‑57 (MQ=255)
                                                           tACGGTCATTTACGACAACCCCTACTTTGCCGCCACACGCTCCTGTGCGCTTGCCGCTCCGACGCCCGCCAGCACATCCCCCGAACGCCGTTCGTTGGCTTTAGCCAGCACCTCTTTTCCATCCTTAAACTGATATCCATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgctttcaccgtcaccggcacacccgatccgccaaaaagaggcgtaccaatgtc                                                                                                                                                                             >  2:41842‑M1/1‑187 (MQ=255)
                                                                  aTTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatat                                                                                                                                                                        >  2:23900‑M1/1‑180 (MQ=255)
                                                                        cacaccccctgctttgCCGCCACGCGCTCCGGGGCGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtccccc                                                                                                                                                                <  1:115899‑M1/244‑78 (MQ=255)
                                                                         acaacaCCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacagatccgccaaaaagaggcgtaccaatgtcgatatagtcccccg                                                                                                                                                               >  2:86988‑M1/1‑173 (MQ=255)
                                                                           accaccgGCTTGGCCGCCACGCTCTCCGGTGAGGTTGCCCCGGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacagagccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcg                                                                                                                                                             <  1:86988‑M1/249‑81 (MQ=255)
                                                                           aacaCCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcg                                                                                                                                                             >  1:307667‑M1/1‑171 (MQ=255)
                                                                              acCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGCCGACCGCCAGCACATCCCCCGACCGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcgg                                                                                                                                                          >  1:184254‑M1/1‑168 (MQ=255)
                                                                                  gCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggaca                                                                                                                                                       >  1:332963‑M1/1‑164 (MQ=255)
                                                                                     ttGCCGCCCCGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatc                                                                                                                                                    <  1:167453‑M1/250‑90 (MQ=255)
                                                                                        ccgccccgccccacggtcctcttgccgctgcgacgcccgccAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcactt                                                                                                                                                <  2:426809‑M1/231‑94 (MQ=255)
                                                                                         cgccCCGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttc                                                                                                                                               <  1:23900‑M1/251‑95 (MQ=255)
                                                                                                     cTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgc                                                                                                                                   >  1:291793‑M1/1‑145 (MQ=255)
                                                                                                         gtgcgtcgcgctgcgacCCACGCCAGCCCAACCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCGCAGGAAGgaaatgcgagtgatttcaccggcaccggcacaaccgatccgcaaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtaaatgactgccaac                                                                                                                               <  2:154476‑M1/243‑111 (MQ=255)
                                                                                                                             cgccAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgg                                                                                                           >  1:103464‑M1/1‑121 (MQ=255)
                                                                                                                             cgccAGCACATCCCCCGAACGCAGTTCGTTGGCTGTAGCCAGCACCGCTGTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccggcaccgggacaaccgatccgccaaaaagaggcgtgccaatgtcgatataggcccccgcgctgacaattacttcgtcaaggactgccaacgggagttgttgtagctgtgg                                                                                                           <  2:419392‑M1/251‑131 (MQ=255)
                                                                                                                                    acaTCCCCCGAACACAGGTCGTTGGCTTTAGCCAGAACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAAAGTGGTCTTTAGTTTCATAAGTCGTTACCTCAGGACGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtccaccgcgcggacaatcaattcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaac                                                                                                    >  2:436491‑M1/1‑114 (MQ=255)
                                                                                                                                                cGCAGTTCGTTGGCTTCAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggcgttgttgtagctgtgggcgcaacaacatgccc                                                                                           >  1:394104‑M1/1‑102 (MQ=255)
                                                                                                                                                           ggCTTTAGCCAGCACCTCTTTTACATCCTTAACCTGATATACATTGCCGAACAATGTGTTCGTTAGTTTCATAAGTCGGTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgttccaatgtcgatatagtcccccgcgctgacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaa                                                                              <  1:436491‑M1/250‑160 (MQ=255)
                                                                                                                                                                     aGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccg                                                                   >  1:38895‑M1/1‑81 (MQ=255)
                                                                                                                                                                       cACCTCTTTTACATCCTTACACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggc                                                                 >  1:146961‑M1/1‑79 (MQ=255)
                                                                                                                                                                           tctTTTACATACTTAAACTGGTATACATTGCCGAGCAAAGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccacc                                                             >  2:85714‑M1/1‑75 (MQ=255)
                                                                                                                                                                            ctTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccacc                                                             >  1:396832‑M1/1‑74 (MQ=255)
                                                                                                                                                                            ctTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccac                                                              <  2:434685‑M1/249‑176 (MQ=255)
                                                                                                                                                                             ttttACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccac                                                           >  1:132420‑M1/1‑73 (MQ=255)
                                                                                                                                                                                        tAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggat                                                >  1:165066‑M1/1‑62 (MQ=255)
                                                                                                                                                                                             tGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcgg                                            >  1:387512‑M1/1‑57 (MQ=255)
                                                                                                                                                                                               atatACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggatt                                         >  2:231849‑M1/1‑55 (MQ=255)
                                                                                                                                                                                                       tGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaaggcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttggtgtagctgtgggcgcaacaacatgcccagagcgttaccaaagtcctgcccggccaccgccagcaggggatgcggattcggaaaa                                  <  1:40092‑M1/250‑204 (MQ=255)
                                                                                                                                                                                                               aaTGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgacggccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagcgttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaatcgcgcgacg                         <  2:197347‑M1/251‑213 (MQ=255)
                                                                                                                                                                                                                 tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaacagaggcgtaccaatgtcgctatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacga                        >  1:46248‑M1/1‑37 (MQ=255)
                                                                                                                                                                                                                    ggTCTTTAGTTTCATAAGTCGTTCCCGCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatc                    <  2:332963‑M1/251‑218 (MQ=255)
                                                                                                                                                                                                                         ttAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgccc                >  1:188026‑M1/1‑29 (MQ=255)
                                                                                                                                                                                                                          tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccacctccagcaggggatgcggattcggaaaacgcgcgacgaaatcgacca               <  1:261066‑M1/250‑223 (MQ=255)
                                                                                                                                                                                                                          tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgacca               >  1:76224‑M1/1‑28 (MQ=255)
                                                                                                                                                                                                                            gTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacg            >  1:7812‑M1/1‑26 (MQ=255)
                                                                                                                                                                                                                            gTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtccccagcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacg            >  1:237294‑M1/1‑26 (MQ=255)
                                                                                                                                                                                                                              ttCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcactacgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacgcg          >  1:37382‑M1/1‑24 (MQ=255)
                                                                                                                                                                                                                              ttCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcacccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacgcg          >  1:286456‑M1/1‑24 (MQ=255)
                                                                                                                                                                                                                                 aTAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaacagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggacaacgcgcgacgaaatcgaccaccgcgttg       >  1:26508‑M1/1‑21 (MQ=255)
                                                                                                                                                                                                                                       cGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaagaggcgtaccaatgtcgatatagtcccccgcgcggacaatcacttcgtcaatgactgccaacgggagttgttgtagctgtgggcgcaacaacatgcccagagctttaccaaagtcctgcccggccaccaccagcaggggatgcggattcggaaaacgcgcgacgaaatcgaccaacgcgttgatgac  <  1:205264‑M1/250‑236 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                           
ATCAGCCGCGTCACGCAGTCATCTTCATAGGCAATCACCGGATTATTGCGGATGTCCGCTACGGTCATTTCCGACAACACCTGCTTTGCCGCCACGCGCTCCTGTGAGCTTGCCGCTGCGACGCCCGCCAGCACATCCCCCGAACGCAGTTCGTTGGCTTTAGCCAGCACCTCTTTTACATCCTTAAACTGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCGTCAGCCCTTGTCGTGTAAGGTGGTTGCCTAAACACGCCCGTTATTCATCACGCCGAACGCGCCGGATACATGATCGGGGTTATCCAGTCGTTAAATCAAGGTATCCGGTTTTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGACAAGCCCTATAAACTCACCGATT  >  NC_000913/2558453‑2558933

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: