| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,228,275 | 0 | T | C | 42.5% | 43.5 / 14.8 | 47 | intergenic (‑1005/‑707) | yohF/yohP | putative oxidoreductase YohF/putative membrane protein YohP |
| Reads supporting (aligned to +/- strand): ref base T (18/9); new base C (6/14); total (24/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.89e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCCGGGTTTTGCTGGCATTAATATCGGTTTCCACACCTTCAACTG‑AAGAAGTAATCCCGTT‑CTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTGCTCGCGTTCCGCCGCCCGTGCTTT‑AACCGTACCCAGGCGGGC‑AGT‑AACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTCAGCTAGCTGAATGCGCTGTTCAGCCACCTGCATATC > NC_000913/2228027‑2228522 | gcCGGGTTTTGCTGGCATTAATATCGGTTTCCACACCTTCAACTG‑AAGAAGTAATCCCGTT‑CTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTTATCGCGTTCCCCCGCCCCGGCTTT‑TACCGGACCCAGGCGGGC‑CGT‑AACCTcc > 1:521580/1‑251 (MQ=255) ggTTTTGCTGGCATTAATATCGGTTTCCACACCTTCAACTG‑AAGAAGTAATCCCGTT‑CTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCCGCCAGCAAT‑TGGCGGG‑GTTGCTCCCGTTCCGCCGCCCCTGCTTT‑AACCGGACCCAGGGGGGC‑AGG‑AACCCCCGccc > 2:322543/1‑251 (MQ=255) cTGGCATTCATATCGGATTCCACACCTTCAACTG‑ACGAAGCAATCCCGTT‑CTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTATTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTTGTCGCGGTCCGCCCCCCGTGGTTT‑TACCGGACCCCCGCGGGG‑CGT‑AACCCTCGCCCGcttctt > 2:54094/1‑251 (MQ=255) ttAATATCGGTTTCCACACCTTCAACTG‑AAGAAGTAATCCCGTT‑CTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTTCTCGCGTTCCGCCGCCCGTGCTTT‑TACCGGACCCAAGCGGGCCAGT‑A‑CCCCCGCCCGGTTCTTTcccc > 1:480099/1‑250 (MQ=255) ttAATATCGGTTTCCACACCTTCAACTG‑AAGAAGTAATCCCGTT‑CTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTGCTCGCGATCCGCCCCCCGCGGTTT‑AAACCCACCCAGGCGGGA‑CGG‑AACCCCCTCCCGATTTTTTccccc > 1:435370/1‑250 (MQ=255) gggTTTCCACACCTTCAACTGGAAGA‑GTAATCCCGTC‑CTGATATAGCTGGCGATCGGTCGTGATAATGGTGTTCTGCGCTTTTTCTATTTGCTGCAAGACCGTGTTTAGCGCCGCCTGGGTTTGCCACTCCCAGGACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTGCTCGCGTTCCGCCGCCCGTGCTTT‑AACCGTACCCAGGCGGGC‑AGT‑ATCCTCCGCCCGATTCTTTCCCCAGATATCg < 2:445041/250‑1 (MQ=255) gTTTCCACACCTTCAACTG‑AAGAAGTAATCCCGTT‑CTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑GTTGCTCGCGTTCCGCCGCCCGTGCTTT‑AACCGTACCCAGGCGGGC‑AGG‑AACCTCCGCCCGGTTTTTTACCCAGATATcc > 1:27027/1‑248 (MQ=255) gTTTCCACACCTTCAACTG‑AAGAAGTAAGCCCGTT‑CTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCGCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTGCTCGCGTTCCGCCGCCCGTGCTTT‑AACCGTACCCAGGCGGGC‑AGT‑AACCTCCGCCCGATTCTTTCCCCAGATATCgag < 2:147338/251‑1 (MQ=255) acacCTTCAACTG‑AAGAAGTAATCCCGTT‑CTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTAGTTGCTGCAATACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCTGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTGCTCGCGTTCCGCCGCCCGTGCTTT‑AACCGTACCCAGGCGGGC‑AGT‑AACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCa < 1:494806/251‑1 (MQ=255) tCAACTG‑AAGAAGTAATCCCGTT‑CTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCTCTGCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGTCGGG‑TTTGCGCGCGTTCCGCCTTCCGTGCTTT‑AACCGTACCCAGGCGGGC‑AGT‑AACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGccct < 1:232131/250‑2 (MQ=255) tCAACTG‑AAGAAGTAATCCCGTT‑CTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTGCTCGCGTTCCGCCGCCCGTGCTTT‑AACCGTACCCAGGCGGGC‑AGT‑AACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGccc < 1:131948/249‑1 (MQ=255) cTG‑AAGAAGGAATCCCGTT‑CTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCAACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTGGTCGCGGTCCGCCCCCCCGGCTTT‑AACCGGTCCCAGGCGGGG‑AGG‑CACCCCCGCCCGGATCTTTCCCCACGTATAGAGATGCCAGCccgccgat > 1:241472/1‑249 (MQ=255) gTAATCCCGTT‑CTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTGGTCGCGTTCCGCCGCCCGTGCTTT‑TAACGTACCCAGGCGGGG‑AGT‑AAACTCCGCCCCATTTTTTTCCCAAGTATCGAGGAGCCAGCccgccggttaaccaa > 1:503236/1‑241 (MQ=255) aTCCCGTTTCTAATATAGCGGGCAATGGGTCGGGATAATGGTGTTCTTCTTTTTTCCTATTGGCTGCAAGACCGTGTTTACCGCCGCCGGGGTTGGCCCCTCCCAGTACAGGCGGGTTACGCTGCCAGCCAGCAAT‑GGGCGGG‑TTTGCCCGCGTTCCGCCGCCCGTGCTTT‑AACCGTACCCGGGGGGGC‑AGT‑AACCTCCGCCCGATTCTTTCCCAAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAg < 1:58732/251‑1 (MQ=255) gTT‑CTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑GTTGCTCGCGGTCCGCCGCCCGTGCTTTTAACC‑TAACCAAGCGGGC‑AGG‑AACCTCCGCCCGGTTCTTTTCCCAGATATCGGGATGCCCGCCCGCCGTTAAGCCAAAAGGACCGt > 1:467372/1‑251 (MQ=255) agcgggCGATCGGGCGCGATATTGGTGTTCTGCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCGGGGTTTGCCACCCCCGGTACAGGGGGGCTACGCTGCCAGCCAGCAAG‑TGGCGGG‑TTTGCTCGCGTTCCGCCGCCCGTGCTTT‑AACCGTACCCAGGCGGGA‑AGT‑AACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCa < 1:116112/247‑1 (MQ=255) cGATCGGTCGCGATAATGTTGTCCTTCGCTTTTTCAATTTGCTGCAAGCCCGTGTTTACCCCCCCCTGGGTTTGCCCCCCCCAGTACAGGCGGGCTCCGCTGCCAGCCAGCATT‑GGGCGGG‑TTGGCTCGCGTTCCGCCCCCCGTGCTTT‑AACCGTCCCCAGGCGGGC‑AGT‑AACCCCCGCCCGATTCTTTCCCCAGATAGCGAGTGGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGcc < 2:410739/251‑1 (MQ=255) aTGGTGTTCTGCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCCGCAAT‑TGGCGGG‑TTTTCTCGCGTTTCGCCGCCCGTGCTTT‑AAACGTACCCCAGCGGGC‑AGT‑AAACCCCGCCCGCTTTTTTCCCCCCATATACAGATGCCCGCCCCCCCCTTAGCCCAAAGCACCCGTGGGGTACCCCGGGCCGGGCCGACCTGCGGc > 2:238805/1‑251 (MQ=255) aTGGTGTTCTGCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTGCTCGCGTTCCGCCGCCCGTGCTTT‑AACCGTACCCAGGCGGGC‑AGT‑AACCTCCGCCCGATTTTTTTCCCAGATATCGAGATTCCAGCCCGCCGTTTAGCCAAAAGGACCGTTGGGGTACCACCGGGCGGGCGTACCTGCGGc > 1:509678/1‑251 (MQ=255) cctcatttcatcttggctgcAAGCCCGTGTTTAACCCCGCCGGGGTATGCCACCCCCAGTACAGGCGGCCTCCGCTCCCGGCCAG‑AATGTGGCGGG‑TTTGCCCGCGTCCCCCCGCCCTTGTTTT‑AACCGTACCCAGGCGGGC‑ATT‑ACCCCCCGCCCAATTCTTTCCCCAGATTCCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTc < 2:257567/236‑1 (MQ=255) agactgttgtaaaccgcgccGGGGTTGGCCACTCCCTGTACGGGCGGGCTCCGTCGCCCGCCAGAAAT‑GGGGGGG‑TGTGCGCGCGTTCCGCCGCTCGTGCTTT‑AACCGTCCCCAGGCGGGA‑TGT‑AACCCCCGCCCGATTCTTTCCCCAGATACAGAAAGGCACGCCCGCCGTTAAGCCAAAAGTACCGTTGGTTTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAg < 2:111038/235‑1 (MQ=255) ccGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTGCTCGCGTTTCGCCGCCCGTGCTTT‑TAACGTACCCAGGCGGGC‑AGT‑AACCTCCGCCCGATTCTTTTCCCAGATATCGAGATGCCAGCCCGCCGGTAAGCCCAAAATACCGTTGGTGTACCACGGGCCGGTCGTACCTTCGGCCGGATCGTTCCGAGCAAACGGCCCCCTTTAGccc > 1:197975/1‑250 (MQ=255) tttAACGCCGCCTGGGTTTGCCACTCCCAGTCCAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGGGTTTG‑TCGCGTTTCGCCCCCCGTGCTTT‑TACCGTACCCAGGCGGGC‑CGT‑AACCTCCGCCCGATTCTTTCCCCCGATATCGGGATGCCAGCCCCCCGGTAAGCCAAAAATACCGTTTGTGGACCCCGGGCCGGTCCTACCTGCGGCCGGATCGGTCAGAGCAAACGGCCCCCTTAATCCTTCTGc > 1:454134/1‑251 (MQ=255) ccccgccTGGGTTTGCCACTCCCAGTACGGGCGTGCTGCTCTGCCAGCCA‑AAATGTGGGGGT‑TTTGCTGGCTTTCCGCCGCCCGTGCTTT‑ACCCGTACCCAGGCGGGT‑AGT‑AACCTCCGCCCGATTCTTACCCCAGATAGCGGGATGCCAGGCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTGAGCCTTCTGCCGACa < 1:80463/249‑1 (MQ=255) gggccccccccagaccgggCGGGCCACGCGGCAAGCCAGTATT‑TTGGGGG‑TGTGCTCGCGCCCCGCCCCCCTTGTTTG‑AACCGTCCCCGGGCGGGA‑AGA‑ACCCCCCCCCCGTTTCTTCCCCCAGATATCGAGAGGCCGGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATGTTTTGCCGc < 2:454134/233‑1 (MQ=255) cacccccatcagaggcgtgttcccgtGCCAGCCAGCAAT‑TGGCGGG‑TTGCCTCGCGTCCCCCCGCCCGTGCTTT‑ACCCGTACCCAGGCGGTC‑AGT‑ACCCCCCGCCCGTTTTTTGCCCGAGATACCGAGATGCCCGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTTCCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCat < 2:295346/226‑1 (MQ=255) aCTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTTCTCGCGTTCCGCCGCCCCTGCTTT‑AAACGTACCCAGGCGGGC‑AGT‑AAACTCCGCCCGATTCTTTCCCCCGATATCGCGATGCCCGCCCGCCCTTAAGCCCAAAGTACCCGTGGGGTACCACCGGCCGGGCCGACCTGCGGGCGGGTCGTTCCGAGGACACGGGCCCACTAAGACCTCTTCCGCCATTTTTTTACGCTccctt > 2:458260/1‑248 (MQ=255) gtacggggggccgccGCTGCCAGCAAGCAAT‑TGGGGGG‑GTTGCTCGCGTCCCGCCGCCCGTGCTTT‑AACCGTACCCGGGCGGGC‑AGT‑ACCCCCCGCCCGATTTTTCCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATccgccg < 2:480099/237‑1 (MQ=255) ggCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTGCTCTCGTTCCGCCGCCCGGGCTTT‑AACCGTACCCAGGCGGGC‑AGT‑AACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTCCCGTTGGTGTACCACGGGCCGGTCGTAACTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACCTTTTTTGCCGCTCCCTATCCGCCGaaa > 1:385176/1‑249 (MQ=255) ggCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTGCTCGCGTTCCGCCGCCCGTGCTTT‑AACCGTACCCAGGCGGGC‑AGT‑AACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCCAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACCTTTTTTGCCGCTCCCTATCCGCCGaaa > 1:32304/1‑249 (MQ=255) tACGCTGCCAGCCAGCAAT‑TGGCGGG‑GTTGCTCGCGTTCCGCCGCCCGGGCTTT‑AACCGTACCCAGGCGGGC‑AGT‑AACCTCCGCCCGATTCTTTCCCCAGATATCGGGATGCCAGCCCCCCGTTAAGCCAAAAGTACCGTTGGTGTACCCCGGGCCGGTCGTACCTGCGGCCGGGTCGTTCAGAGCCAACGGCCCCATTAAGCCTTCTTCCGCCATTTTTTGCCGCTCCCTATCCGCCGCAAAGTCGATCt > 2:431456/1‑251 (MQ=255) caCGCTGCCAGCCAGCAAT‑TGGCGGG‑TTGGCTCGCGTCCCGCCGCCCGTGCTTT‑AACCGTACCCAGGCGGGC‑AGT‑ACCCCCCGCCCGATTCTTCCCCCAGATATCGAGAGGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCt < 1:322543/250‑1 (MQ=255) gcggacacccgccatgtgggggttttGCTGGCGTCCCGCCCCCCGTGCTTA‑ACCCGTACCCAGGGGGGG‑AGA‑GCCCCCCCCCCAATTCTTTCCCAAAATATCGAGATCCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCg < 1:337742/228‑1 (MQ=255) attggggggg‑TTTGCGCGCTCTCCCCCCCCCGTGCTTT‑ACCCTCACCCGGGCGGGC‑AGT‑ACCCCCCGCCCGATTCTTCCCCCATAAACCGAGATGCCACCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGt < 2:324115/244‑1 (MQ=255) tgcgcgcgtccccccccccGTGTTTT‑AACCGTCCCCAGGCGGGC‑AGT‑ACCCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCt < 1:238805/234‑1 (MQ=255) cgTTCCGCCGCCCGTGCTTT‑AACCGTACCCAGGCGGGC‑AGT‑AACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTg > 1:188520/1‑251 (MQ=255) gatCCGCCGCCCGTGCTTT‑AACCGTACCCAGGCGGGC‑AGT‑AACCTCCGCCCGATTCTTTCCCCCGATATCGAGATGCCCGCCCGCCGTTAAGCCAAAAGTACCGTTGATGTACCACGGGCCGGTCGTAACTGCGGCCGGATCGTTCAGAGCACAAGGCCCCATTACGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGCCGATCTGCGGACCATCCTGAGCGGCAACTGCATTCGCCTgg > 1:246989/3‑251 (MQ=255) cccgcccCCCGTGCTTT‑ACCCGGACCCAGGCGGGC‑AGT‑ACCCCCCCCCCGATGCTTCCCCCAGATATCGAGGCGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTGTGTGCCGCTCCATATCCTCCGAAAATTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGc < 1:53863/250‑1 (MQ=255) gccgccCGTGCTTT‑AACCGTACCCAGGCGGGC‑AGT‑AACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTc > 1:443014/1‑251 (MQ=255) ttt‑ACCCGTCCCAAGGCGG‑C‑AGTTAACCCCCCCCCGATTTTTCCCCCATATATCGAGTTACCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTCCCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTTCCGCTCCATATCCGCCGAAAAGTCGATCTGCGTACCATCCTGAGTGGCAACTGCCTTCGCCTTGGCTTCAGCTAGCTGa < 1:476239/250‑1 (MQ=255) ttaaccttccccgtgCGGGC‑AGT‑CACCCCCGCCCGATTATTTCCCAAGATATGGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTCAGCTAGCTg < 2:348175/234‑1 (MQ=255) cccgatccccAGGCGGGC‑AGT‑ACCCCCCGCCCGATTCTTGCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTCAGCTAGCTGAATg < 1:198507/243‑1 (MQ=255) ccGTACCCAGGCGGGC‑AGT‑AACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTg > 1:182637/1‑196 (MQ=255) cccAGGCGGGC‑AGT‑AACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTCAGCTAGCTGAATGCGCTGTTc > 1:136731/1‑251 (MQ=255) ccAGGCGGGC‑AGT‑AACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTCAGCTAGCTGCATg > 2:198507/1‑242 (MQ=255) cAGGCGGTC‑AGT‑ACCCCCCCCCCGATTCTTCCCCCGGATAACGAGATGCACGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTCAGCTAGCTGAATGCGCTGTTCAg < 1:241540/251‑1 (MQ=255) aCCTCCGCCCGATTCTTTACCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCATTCGCCTGGGCTTCAGCTAGCTGAATGCGCTGTTCAGCCACCTGCATATc > 1:417236/1‑251 (MQ=255) | GCCGGGTTTTGCTGGCATTAATATCGGTTTCCACACCTTCAACTG‑AAGAAGTAATCCCGTT‑CTGATATAGCTGGCGATCGGTCGCGATAATGGTGTTCTGCTCTTTTTCTATTTGCTGCAAGACCGTGTTTAACGCCGCCTGGGTTTGCCACTCCCAGTACAGGCGGGCTACGCTGCCAGCCAGCAAT‑TGGCGGG‑TTTGCTCGCGTTCCGCCGCCCGTGCTTT‑AACCGTACCCAGGCGGGC‑AGT‑AACCTCCGCCCGATTCTTTCCCCAGATATCGAGATGCCAGCCCGCCGTTAAGCCAAAAGTACCGTTGGTGTACCACGGGCCGGTCGTACCTGCGGCCGGATCGTTCAGAGCAAACGGCCCCATTAAGCCTTCTGCCGACATTTTTTGCCGCTCCATATCCGCCGAAAAGTCGATCTGCGGACCATCCTGAGTGGCAACTGCCTTCGCCTGGGCTTCAGCTAGCTGAATGCGCTGTTCAGCCACCTGCATATC > NC_000913/2228027‑2228522 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |