| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,466,201 | 0 | T | C | 28.1% | 100.0 / 11.5 | 61 | pseudogene (810/2518 nt) | ydbA | putative outer membrane protein, N‑terminal fragment |
| Reads supporting (aligned to +/- strand): ref base T (21/20); new base C (11/5); total (34/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCAGATTGATGAAGCGAATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAG > NC_000913/1465952‑1466444 | gCAGATTGATGAAGCGAATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTg < 2:175204/251‑1 (MQ=255) gtaGCGAAGAACACTGTTGGCCTTGAAGGGGTGAGCGCAGATGGAGGAGCGAAGTGGCAATATAATCACAACGGTGAGATTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCGATGGTAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGCGACAgcgcaac < 2:428834/249‑4 (MQ=18) aaTAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTgg > 2:168868/1‑250 (MQ=255) acTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACa > 2:97374/1‑250 (MQ=255) gTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGGGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGCGACAGCGCAACGGTGGATAACAAggg > 2:178590/1‑251 (MQ=255) tGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATg > 1:179078/1‑250 (MQ=255) gAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGAGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCTGTCACAGTATT‑GATATCACCGGAGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGAc > 1:450462/1‑251 (MQ=255) aaGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGCAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGAGACAGCGCAGCGGTGGATAACAAGGGCCC‑CATGAcc > 2:496900/1‑251 (MQ=255) ggggTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGGCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGt < 2:352615/251‑1 (MQ=255) gTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCAc < 1:491487/251‑1 (MQ=255) cacataTGGAGCAACGAAGGGGAAATACAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATc < 2:27808/246‑1 (MQ=18) tGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGCGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCggggg > 2:466037/1‑248 (MQ=255) cAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGAc < 1:302572/197‑1 (MQ=255) aCGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGGCACGGGATT‑GATATCACCGGCGACAGCGCAACGGGGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCAtcgg > 2:337091/1‑248 (MQ=255) ccacacctaaaaacaACGGCGAGCTTGTGATTAAGGGTGATAAGGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATCGGTATCCAg < 2:48348/239‑1 (MQ=14) aaTATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGCGACAGCGCGACGGTGGATAACAAGGGCCC‑CATGACCGTCACCGATCCGGAGACCATGGGTCTCCAggtt > 1:372264/1‑248 (MQ=255) ataATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCGCCGATCCGGAGTCCATGGGTATCCAGATCGAc < 1:168868/251‑1 (MQ=255) taATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCAACGGTGGATAACACGGGCAC‑CATGACCGTCCCCGCTCCGGAGTCCATGGGTATCCAGATctcgg > 1:48348/1‑247 (MQ=255) attaCGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTGACGGTATT‑GCTATCACCGGCGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATa > 1:200751/1‑250 (MQ=255) taCGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAGGATTCCACCGGTACGGAAATCACCGGCAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAAc < 2:113181/250‑1 (MQ=11) taCGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGATTCCATGGGTAGCCAGATCGACGGTGACAAGGCCATCGTCAATAAc < 1:16267/250‑1 (MQ=255) gggTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGCGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATTGACGGCGACCAGGCCGTCGTCAATAACgc > 2:292641/1‑248 (MQ=255) gTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGAACGGACATCACCGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCCGCGGACCAGATATT‑GACATCACCGGTGACAGCGCAACGGTGGATCACAAGGGCAA‑CAAGACCGTCACCGATCCGGAGTCCAAAGGAATCAAGATCGACAGTGACAAGGCCATCGTctacaacaaaacc > 1:326546/1‑239 (MQ=17) gCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACCGAAATCCACGGAAATAACGGGCAAGAGATTCCGGACGTCAATATGGATGTCAGCGGCGGCGGTCACGGTATT‑GACATCACCGGTGACAGCGCGACGGGGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATTGACGGCAACAAGGACATCGATAACAACGAAGGCGagagagc > 2:276748/1‑248 (MQ=17) caGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATaa > 1:103941/1‑232 (MQ=11) caGTAAACAACAATGGCAAAACCACCGTTGACGGGAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATCGGTAGCCAGATTGACGGCGACCAGTCCATCGTCAATaa < 2:103941/232‑1 (MQ=11) caGTAAACAACAAGGGAAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGTACCATc < 2:418629/251‑1 (MQ=255) tAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCCCCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGCCGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATCTCACCGGTGACAGCGCGACGGTGGATAACAAGGGCCC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGCGCACCATCAcc > 2:160698/1‑251 (MQ=255) aaaCAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCa < 2:7050/251‑1 (MQ=255) caaTGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGTCGAGAGCACCATCACCAACGGTg < 2:179078/251‑1 (MQ=255) aTGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCATCACCGATCCGGAGTCCATGGGAATCCAGATCGACGGTGACAAGGCCATCGCCACTAACGAAGTCGAGAGCACCATCACCAACGGTggc > 1:461041/1‑251 (MQ=255) aaaaCCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATTACCGGCAATAACGGGAAAGTGATTCAGAACGGCGGTGTGGATGTCAGCGGCGGCGGACACGGAATT‑GATATCACCGGCGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGAACGTCACCGATCCGGAGTCCATGGGTATCCAGGTTGAAGGCGACCAGACAATCCAAAATAACGAAGGCGAACGCAACATAACCAACGGTggccacgg > 2:239266/1‑246 (MQ=255) ccaccGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAAGAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGTTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTggcaccggcacc < 1:480402/251‑1 (MQ=255) ccaccGTGGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACAGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTggcaccggcacc < 2:146659/251‑1 (MQ=255) cGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATg < 1:494935/251‑1 (MQ=255) cGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATg < 2:97924/251‑1 (MQ=255) tAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTCATCCAGGACGGCGATCTGGATGTCAGCGGCCGCGCTAACGGTATT‑GATATCACCGGTGACAGCGCCACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGCGACCACGCCATCGTCAATAACGCAGGCGAGAGCCCCATCACCAACGGTGGCCCCGGCACCCAgctcaacggt > 1:322257/1‑241 (MQ=17) tAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGAGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCGATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATgg > 1:13219/1‑249 (MQ=255) aTTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGCGACCAGGCCATCGGCAATAACGAAGGCGAGAACACCATCCCCAACGGCGCCACCGGCACCCCGATTTATGGtgataa > 1:307732/1‑248 (MQ=17) cGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGCATTTGA‑ATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACgg > 1:95677/1‑251 (MQ=255) gTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATTGACGGAGACCAGGCCGTTGTTAACAACGAAGGCGAGAGCACCATCACCAACGGGGGCACCGGCACCCAGATTAATGGGGGTGACGCCACGGc > 2:412777/1‑250 (MQ=11) ggAAATCAACGGTAATAACGGGAAAGGGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAaaca < 2:519410/251‑1 (MQ=255) gAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGCGGCCCCGGCACCCAGATTAATGGTGATGACGCCACGGCAaacc > 1:473939/1‑249 (MQ=255) cAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAaacaacaac < 1:409884/250‑1 (MQ=255) ggTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGAGGGTGGATAACAAGGGCCC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATACAGATCGACGGTGCCAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCACCGGAGGCACCGGCACCCAGATTAATGGTGATGAAGCCACGGCAAACAACAACGGCa > 1:76499/1‑250 (MQ=18) aGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACg < 1:160698/251‑1 (MQ=255) gTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACgg < 1:351/251‑1 (MQ=255) ggACGGCGATCTGGATGTCAGCGGCGGCGGTCCCGGTATT‑GATATCACCGGCGACAGCGCGACGGAGGATCACAAGGGCAA‑CATGACCGTCACCGATCCGGAGTCCATGGGCATCCAGCTCGTCGGCGACAACGCAATCGTCCATAACGAAGGCGAGAGCACCATCCCCAACGGTGGCACCGGCACCCAGGTTAACGGCGATGACGCCACGGCAAACAACAACGCCAACACCACCGTTGACGGCAAGGAtt > 1:208201/1‑251 (MQ=14) gccatcttgaagttaGCGGCGATGGTGACGGTACT‑GATATCACCAGAGACAGCGAGAAGGGGGATAACAAGGGCGC‑CATGACCGTCCCCGATCCGGAGTCCATGGGTAACCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCTCCAACGGTGGCACCGGCCCCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCAcc < 2:303457/237‑1 (MQ=17) gCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGGGGCACCGGCACCCAGATTAATGGGGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCAcc > 1:394116/1‑251 (MQ=255) aTCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGt > 1:473686/1‑251 (MQ=255) tCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGCGGCCGCGCGACGGTGGACAACAAAGG‑ACACATAACCGTCACCGCACCGGAGTCCATCGGCTTCCTGAACGACGGTGACACCGCCATCGTCAATAAAGAAGGCGAAAGCACCATCACCAACGGTGGCAACGGCCCCCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCCCCGATGAAGGCCAGGATTACACCGGtc > 1:78693/1‑250 (MQ=9) ggATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTa < 2:473686/248‑1 (MQ=255) ggTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGCGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGcaata > 1:324603/1‑250 (MQ=255) aCGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAACGGTGATGACGCCACCGCAAACAACAACGCCAAAACCACCGTTGACGGCAAGGATTCCACCGCTACGGAAATCAATGGTAATAACgg > 1:412143/1‑250 (MQ=255) tt‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCTTCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGCTTAATGGTGATGACGCCACGGCAAACAACAACGGCAACACCACCGTTGACGGCCAGGATTCCACCGGTACGGAAATCACCGGTAATAACGGAAAAGtt > 1:209773/1‑251 (MQ=255) t‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCGTCGTCAAAAACGAAGGCGAGAGCACCATCACAAACGGGAGGACCGGCACCCAGGGAAATGGTGATGACGCCCCGGCCCACAGAAACGGCAAAAACACCGTGGACGACAAGGCATCCACCGGGACGAAAATAAACGGTAATAACGGaac > 2:144599/1‑245 (MQ=18) gATATCAACGGTGACAGCGCGAAGGTGGAGAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTAACCAGATCGTCGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCAACAACGGTGGCAGCGGGACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTa < 1:485959/250‑1 (MQ=21) atCACCGTAGACAGCGCGACTGTGAATAACAAGGGCGC‑CATGACCGTCGCCGATCCGGAGGCCATGGGTATCCAGATCGATGTTGACAAGGCCATCGGCAATAACGAATGCGAGAGCACCAGCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGTAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCa < 1:521869/251‑1 (MQ=21) atCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTc > 1:247871/1‑250 (MQ=255) cACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAg < 1:182032/250‑1 (MQ=255) | GCAGATTGATGAAGCGAATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATT‑GATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCAC‑CATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAG > NC_000913/1465952‑1466444 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |