| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,523,109 | G→A | L293L (CTG→TTG) | xapB ← | xanthosine:H(+) symporter XapB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,523,109 | 0 | G | A | 97.4% | 122.5 / NA | 39 | L293L (CTG→TTG) | xapB | xanthosine:H(+) symporter XapB |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (20/18); minor base T (0/1); total (20/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCACCGAAAAGTAATCTACTGCCATGCCACTCAGAATCGAGCCAACCCATGCGCCGACACCATTTACCATGGTCATAAAGAGCCCCTGCGCGCTGGCACGAATGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAGCGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAACTGACAGTAAAATGGAGGGATATTTCACCACAAAACTGTCAGCAAACTCCGGGTTACGGGCGAAATCATGTAGGAACGGATTACCAAAAACGTTGGTAATTTGCAGTAC > NC_000913/2522863‑2523319 | cccccGAAAAGTAATCTACTGCCATGCCACTCAGAATCGAGCCAACCCATGCGCCGACACCATTTACCATGGTCATAAAGAGCCCCTGCGCGCTGGCACGAATGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGt < 2:148505/247‑1 (MQ=255) atgccaCTCAGAATCGAGCCAACCCATGCGCCGACACCATTTACCATGGTCATAAAGAGCCCCTGCGCGCTGGCACGAATGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCAt > 1:260925/1‑251 (MQ=255) cAGAATCGAGCCAACCCATGCGCCGACACCATTTACCATGGTCATAAAGAGCCCCTGCGCGCTGGCACGAATGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCAGCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGttt < 1:301763/251‑1 (MQ=255) cGAGCCAACCCATGCGCCGACACCATTTACCATGGTCATAAAGAGCCCCTGCGCGCTGGCACGAATGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATg < 1:233886/250‑1 (MQ=255) cGAGCCAACCCATGCGCCGACACCATTTACCATGGTCATAAAGAGCCCCTGCGCGCTGGCACGAATGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGc < 2:260925/251‑1 (MQ=255) ccAACCCATGCGCCGACACCATTTACCATGGTCATAAAGAGCCCCTGCGCGCTGGCACGAATGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATTACGGTTTTAATGCCaaa < 1:326433/251‑1 (MQ=255) cGACACCATTTACCATGGTCATAAAGAGCCCCTGCGCGCTGGCACGAATGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTaaaa > 1:372748/1‑249 (MQ=255) ttACCATGGTCATAAAGAGCCCCTGCGCGCTGGCACGAATGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACGCAGCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGAt < 2:293809/250‑1 (MQ=255) cccATGGTCATTAAGAGCCCCTACGCGCTGGCACGAATGCTGGAATCAACTTCCTGTGCGACAAATACCGAACCATAAATATTGAAGAAATCGAATGCATAGCCATAAACAATCATCGACAGCAGCAGCAATATAAATCCGGGTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGTAACGTCCAGGCCACCATACGCTTCAGCATGACGTTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGt < 1:213357/250‑1 (MQ=255) aTAAAGAGCCCCCGCGCGCTGGCACGAATGCTGGAATCAACTTCCTGTTCGCCAAATACCGAACCAGAAATATTGAAGAACTCGAATGAACAGCCATAAACAATAATCGACAGCAGCAGCAAACTAAATCCGGTAGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTAATCAGCATGACGGTTTTCATGCCAAATCGCTTTAAAATGAATGGGATAGTCAGTATaa > 2:23055/1‑250 (MQ=255) aaGAGCCCCTGCGCGCTGGCACGAATGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGcc < 1:104845/251‑1 (MQ=255) cccTGCGCGCTGGCACGAATGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAAGGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAAGCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACtgc < 2:136382/251‑3 (MQ=255) cTGCGCGCTGGCACGAATGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTg > 1:47719/1‑251 (MQ=255) ggCACGAATGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGGTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCtgtg < 2:304220/251‑1 (MQ=255) cACGAATGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGCAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCTGTGa > 1:228921/1‑250 (MQ=255) cGAATGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAAc > 1:357148/1‑251 (MQ=255) aTGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAACTg > 1:306808/1‑250 (MQ=255) aTGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAACTGa < 1:318894/251‑1 (MQ=255) ggAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCAGCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCCCTTCTGCCATCTGTGACACTGACAGTa < 2:82823/251‑1 (MQ=255) aCTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAACTGACAGTAAAATGGa < 2:411604/251‑1 (MQ=255) tGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATAATCGACACAAGCAGCAAAATAAATCCGAATGTTGCCGGATCGACATAGGCGACGAAGCCAAAGCGCAACGACCAGGCCACAATAATAAGCAGCATGACGGTTTTAATGCCAAATAGCTTACAAAAGAATGGGATAGTCAGTATAAAGCCCACCTCTGCCATCTGTGAAACTGACAGTAAACTGGAGGGat > 1:39624/1‑250 (MQ=255) aCCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAACTGACAGTAAAATGGAGGGATATTTCACCACaa > 2:153679/1‑250 (MQ=255) aaCCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCATCGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTaaa < 1:123743/167‑1 (MQ=255) aaCCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTaaa > 2:123743/1‑167 (MQ=255) atatTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAACTGACAGTAAAATGGAGGGATATTTCACCACAAAACTGTCAGCaa > 1:337473/1‑250 (MQ=255) atatTGAAGAAAACGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAACTGACAGTAAAATGGAGGGATATTTCACCACAAAACTGTCAGCaaa < 2:372748/251‑1 (MQ=255) atagAATGCACAGCCATAAACAATCATCGACAGAAGCAGCAAAATAAATCCGGTTGTTGAAGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGAATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATCGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAACTGACAGTAAAATGGAGGGATATTTCACCACAAAACTGTAAGCAAACTCCGGGTTAc > 1:98365/4‑251 (MQ=255) aTCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAACTGACAGTAAAATGGAGGGATATTTCACCACAAAACTGTCAGCAAACTCCGGGTTAc > 1:98364/1‑251 (MQ=255) gAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGCTAGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAACTGACAGTAAAATGGAGGGATATTTCACCACAAAACTGTCAGCAAACTCCGGGTTACggg > 1:180862/1‑251 (MQ=255) cgCCATAAACAATCATCGACAGCAGCAGAAAAATAAATCCGGCTGTTGACGGATCGCCCTAGGCGACGAAGCCAAAGCGCCAAGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTACAAAGAATGGGATAGTCAGAATAAAGCCCACTTCTGCCATCTGTGAAACTGACAGTAAAATGGAGGGATATTTCACCACAAAACTGTCAGCACACTCCGGGTTACGGGCgctatc > 2:258351/2‑245 (MQ=255) aTAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTa < 1:412620/131‑1 (MQ=255) aTAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTa > 2:412620/1‑131 (MQ=255) cAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCCTAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAACTGACAGTAAAATGGAg > 2:140332/1‑191 (MQ=255) cAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCAGCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACCTCTGCCATCTGTGAAACTGACAGTAAAATGGAg < 1:140332/191‑1 (MQ=255) atcGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCACATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAACTGACAGTACAATGGAGGGATATTTCACCCCAAAACTGTCAGCAAACTCCGGGTTACGGGCGAAATCATGTAGGAACGGAtt > 1:41835/1‑251 (MQ=255) agcaAAATAAATCCGGCTGTTGACGGATCGCCATAGGCGCAGACGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCAATCTGTGAAACTGACAGTAAAATGGAGGGATATTTCACCACAAAACTGTCAGCAAACTCCGGGTTACGGGCGAAATCATGTAGGAACGGATTACCAAAAACGtt > 2:51367/1‑251 (MQ=255) gttgttGACGGATCGCCATAGGCTAAGAAGCCAAAGCGCAACGTCCAGGCAACCATTCTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAACTGACAGTAAAATGGAGGGATATTTCACCACAAAACTGTCAACAAACTCCGGGTTACGGGCGAAATCATGTAGGAACGGATTACCAAAAACGTTGGTAATTTGCAGttc < 2:364785/251‑3 (MQ=255) gCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAACTGa > 2:11988/1‑125 (MQ=255) gCGAAGAAGCCAAAGCGCAACGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAACTGa < 1:11988/125‑1 (MQ=255) | CCACCGAAAAGTAATCTACTGCCATGCCACTCAGAATCGAGCCAACCCATGCGCCGACACCATTTACCATGGTCATAAAGAGCCCCTGCGCGCTGGCACGAATGCTGGAATCAACTTCCTGTTCGACAAATACCGAACCAGAAATATTGAAGAAATCGAATGCACAGCCATAAACAATCATCGACAGCAGCAGCAAAATAAATCCGGTTGTTGACGGATCGCCATAGGCGAAGAAGCCAAAGCGCAGCGTCCAGGCCACCATACTCATCAGCATGACGGTTTTAATGCCAAATCGCTTTAAAAAGAATGGGATAGTCAGTATAAAGCCCACTTCTGCCATCTGTGAAACTGACAGTAAAATGGAGGGATATTTCACCACAAAACTGTCAGCAAACTCCGGGTTACGGGCGAAATCATGTAGGAACGGATTACCAAAAACGTTGGTAATTTGCAGTAC > NC_000913/2522863‑2523319 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |