New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3652036 =	NA (NA)	44 (1.080)	41/484	0.2	100%	noncoding (1195/1195 nt)	IS5	repeat region
	?	NC_000913	3938725 =	0 (0.000)					coding (499/993 nt)	rbsR	DNA‑binding transcriptional dual regulator RbsR

CGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGA  >  NC_000913/3938488‑3938966                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                  gaaaaacgataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtggtagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAat                                                                                                                                                                                                                                       >  1:171995‑M2/238‑250 (MQ=255) gaaaaacgataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAat                                                                                                                                                                                                                                       <  1:294011‑M2/13‑1 (MQ=255)         ataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCg                                                                                                                                                                                                                              <  2:319685‑M2/22‑1 (MQ=255)           aaccatcgggcgatgttattcacgctggacatcctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgataagaatttccccgcttagaagacccttccTAAGCCACGCAATATCTGATCGAt                                                                                                                                                                                                                            <  2:256254‑M2/24‑1 (MQ=255)            accaactggcgatgttagtcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATa                                                                                                                                                                                                                           <  2:336575‑M2/25‑1 (MQ=255)                     cgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCAt                                                                                                                                                                                                                   >  1:295387‑M2/218‑250 (MQ=255)                                  gctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTg                                                                                                                                                                                                     <  1:108849‑M2/47‑1 (MQ=255)                                     ggccaacctgtttcgggcggaccaactgctacgtcagtgggagagatctcaataacaactggggataccgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagacatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTAt                                                                                                                                                                                                  >  2:208274‑M2/202‑251 (MQ=255)                                        caacctgtttcgggcggacgaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcacctgccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTAc                                                                                                                                                                                               <  2:1412‑M2/53‑1 (MQ=255)                                         aacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTGAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTAcc                                                                                                                                                                                              <  1:206090‑M2/54‑1 (MQ=255)                                           cctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaactgtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCgg                                                                                                                                                                                            <  1:142584‑M2/56‑1 (MQ=255)                                                gtagggcggaacaaatgatacgtcattgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTATCAACGCAATATCTGAGCGATAAAGGGCATACCCTTATCGCCTGTATTTCCGGCCCGc                                                                                                                                                                                       <  2:382636‑M2/61‑1 (MQ=255)                                                      cggaccaaatgatgcatcattgggagagagctcactaaaaactggggatcacgccttaaatggcgaagaaacggtctaaataggctgatacaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGTTCGATAAAGGTCAGACCCGTATCGCCTGTATTACCGGCCCGCTGGatc                                                                                                                                                                                 <  2:50398‑M2/67‑2 (MQ=255)                                                             aatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTcc                                                                                                                                                                          >  1:193457‑M2/178‑251 (MQ=255)                                                                gatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGgc                                                                                                                                                                       <  2:109377‑M2/77‑1 (MQ=255)                                                                           gggagcgatctcactaaacactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGt                                                                                                                                                            >  1:331745‑M2/164‑251 (MQ=255)                                                                                  atcgcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAgg                                                                                                                                                     <  2:295387‑M2/95‑1 (MQ=255)                                                                                      cactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAgg                                                                                                                                                     <  1:79720‑M2/95‑1 (MQ=255)                                                                                          aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCgg                                                                                                                                              <  1:153217‑M2/102‑1 (MQ=255)                                                                                          aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCg                                                                                                                                               <  1:132597‑M2/101‑1 (MQ=255)                                                                                           aaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGggc                                                                                                                                            >  1:179591‑M2/148‑251 (MQ=255)                                                                                               ctggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGgcggcg                                                                                                                                        >  2:187296‑M2/144‑251 (MQ=255)                                                                                                     ataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGaa                                                                                                                                   >  1:183070‑M2/138‑250 (MQ=255)                                                                                                                                  taaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCt                                                                                                      >  2:2027‑M2/109‑250 (MQ=255)                                                                                                                                   aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTAt                                                                                                    <  1:2027‑M2/144‑1 (MQ=255)                                                                                                                                       aggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGaa                                                                                                 <  1:336241‑M2/147‑1 (MQ=255)                                                                                                                                       aggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGGTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGaa                                                                                                 <  1:34437‑M2/147‑1 (MQ=255)                                                                                                                                                  aggcatgtacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATAGCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTAGCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGGCACTGGTGAt                                                                                     <  2:364764‑M2/159‑1 (MQ=255)                                                                                                                                                      atttacgggagaaaaaatcggctcaaacatgaagtaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGTCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGCTGGCTATGAAGTCACTGGTGATTTTg                                                                                 >  2:132260‑M2/89‑251 (MQ=255)                                                                                                                                                       tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTg                                                                                 >  2:7235‑M2/88‑250 (MQ=255)                                                                                                                                                        ttacgggataaaaaaccggctcaaacatgaagaattgaaatgattgaggcagccgagaagaatttccccgcctattcgcaacgtccTTAGCAACGCAATATCTGAGCGATAAAGGTCATACCCGTATCGCCTGTATTGCCTGCCCGCTGGATAAAACTCCGTCTCGCCTGCGGTTGGAAGTTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATGCCTGATGGCTCTGAAGTCACTGGTGATTTTGa                                                                                <  1:202629‑M2/164‑1 (MQ=255)                                                                                                                                                                gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCTCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAAcgg                                                                       <  1:384125‑M2/173‑1 (MQ=255)                                                                                                                                                                  aaaaagcggctcaaacaggaagaaatgaaatgacggagtcagccgagaagaatttccccgcttattcgcaccttccTGAGCAACGCAATATCTGAGCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAAGTCCGGCGCGCGTGCGGTTGGAAGGTTATCGGGCGGGGATGAAACGTGCGGGTCTCATCAGGCCTGATGGCGATGAATTCGCTGGGGATTTTGAATTTAAcggcg                                                                     <  2:24153‑M2/175‑1 (MQ=255)                                                                                                                                                                         ggctcaaacatgaagaaattaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGa                                                              <  1:284282‑M2/182‑1 (MQ=255)                                                                                                                                                                           ctcaaccatgaagaactgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATATGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCATGATGGCTCTGAAGTCACTGGGGAGTTTGAATTTAACgacgggtgatacg                                                            >  2:324827‑M2/68‑245 (MQ=255)                                                                                                                                                                             caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGGGATTTTGAATTTAACGGCGgggttgtgtgt                                                          >  2:404170‑M2/66‑246 (MQ=255)                                                                                                                                                                                               atgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATca                                        <  2:295465‑M2/204‑1 (MQ=255)                                                                                                                                                                                                       gtcagccgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAACCTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCt                                <  2:30029‑M2/212‑1 (MQ=255)                                                                                                                                                                                                             cgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTc                                                                                                               >  2:186396‑M2/34‑166 (MQ=255)                                                                                                                                                                                                             cgagaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTc                                                                                                               <  1:186396‑M2/133‑1 (MQ=255)                                                                                                                                                                                                                gaagaatttccccgcttattcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCa                       <  1:126693‑M2/221‑1 (MQ=255)                                                                                                                                                                                                                 aagaatttccccgcttattcgcaccttccTTAGAAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTCCCGGCCCGCGGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGTTTTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTCACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGCCCTCAg                      <  2:290939‑M2/222‑1 (MQ=255)                                                                                                                                                                                                                                   tcgcaccttccTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCGATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGaaa     <  1:57526‑M2/239‑1 (MQ=255)                                                                                                                                                                                                                                     gcaccttccGTAGCAACGCAAGATCTGATCGATAAAGGGCAGACCCGTATCGCCTGTATTAACGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATTGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGCCTGTACCGGAAATGa  <  2:242749‑M2/242‑1 (MQ=255)                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                  CGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGA  >  NC_000913/3938488‑3938966

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.