| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,492,211 | IS150 (–) +3 bp | intergenic (+36/‑257) | sokB → / → trg | putative small regulatory RNA antitoxin SokB/methyl‑accepting chemotaxis protein Trg |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1492211 = | 0 (0.000) | 14 (0.350) | 14/482 | 1.1 | 100% | intergenic (+36/‑259) | sokB/trg | putative small regulatory RNA antitoxin SokB/methyl‑accepting chemotaxis protein Trg |
| ? | NC_000913 | 3720633 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
| * | ? | NC_000913 | = 1492213 | 0 (0.000) | 19 (0.470) | 16/486 | 1.0 | 100% | intergenic (+38/‑257) | sokB/trg | putative small regulatory RNA antitoxin SokB/methyl‑accepting chemotaxis protein Trg |
| ? | NC_000913 | = 3722075 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
CACCGTCCCGGAACCGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGGGTTGTGCTTCATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTCGTTACTCTCTTCATTCCAATAGCATTAATTTTCTATGCAATAATTGTTGTAAAAATGTGACGCAAAGAGGTTTTTGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGA > NC_000913/1491963‑1492461 | caactctggatcagcactaacgcctttaggtttgggaattaaacctttttctccatgtttttcatagagtgcaacccagttccagacctgggttcggtgtactccaaaacgtgccgagatgatcctgtaaccatcatcatttgtgaagtagtgattcacgacttcaaggcgctttgcaaaagtgtattttgtctttgccatattatgggctattccagttcagcggctaacaaaatgggtgaagtacaGGc > 2:31186‑M1/249‑251 (MQ=255) acgCAGTTCGGAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTACTGCAGATAATGAGCAGACACACCACCAGAGGGTTGTGCTTCATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgacccc > 2:239810‑M1/2‑238 (MQ=255) taacgcctttaggtttgggaattaaacctttttctccatgtttttcatagagggcaacccatgtcctgacctgggttcgggggacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccattttatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTAt < 1:96240‑M1/20‑1 (MQ=255) gagCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTACTGCAGATAATGAGCAGACACACCACCAGAGGGTTGTGCTTCATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaacaagttggac > 2:128838‑M1/1‑226 (MQ=255) ggaattaaacctttttctccatgtttttcatagagggcaacccatgtcctgacctgggttcgggggacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGAc > 1:263345‑M1/215‑251 (MQ=255) gaattaaacctttttctccatgtttttcatagagggcaacccatgtcctgacctgggttcgggggacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACg < 1:88857‑M1/38‑1 (MQ=255) cAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGGGTTGTGCTTCATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTGCATTCGTTGTCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaaggtggacagttaaacacgaggcagataggtctgattcc < 2:151377‑M1/251‑56 (MQ=255) aaTGCAGATAATGAGCAGACACACCACCAGAGGGTTGTGCTTCATAGACTTTCTCCTTGCCGGATGGCGGGTCAGAGCCTAAGATCTCACTTGCTAGGCTCCTTCGTTGGCCTCGGTTGATAGAAATATCGCTCGGGGCCTTCGTCTTTATGATTCCCGGCTAGCCTGAAAACAGAACGTCTCAGGCtgtactgaccccaaaaagttggacagttaatcacgcggcatacaggtctgattccgatattca > 1:421287‑M1/1‑187 (MQ=255) ccaccaGAGGGTTGTGCTTCATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagcccttttaatttc < 1:271475‑M1/251‑88 (MQ=255) gggggacaccaaaacgtgccgagatgatcatgtaaccatcatcagttgtgaagtagtgaatcacgacttcacggcgcttttcaaacgggtattttggctttgaaatattcggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGACATTGCGTGCTGTTTTCCAGCATTTTTCGTCATTCGGGtt < 1:28426‑M1/96‑1 (MQ=255) gacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGcc < 2:218498‑M1/100‑1 (MQ=255) aTAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgtt > 1:300891‑M1/1‑144 (MQ=255) ccTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaa < 2:127150‑M1/251‑119 (MQ=255) cctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCGCTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTCGTTACTCTCTTc > 1:374603‑M1/126‑250 (MQ=255) aaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTCGTTACTCTCTTCATTcc > 1:80475‑M1/121‑250 (MQ=255) taatatctgAATTGCTAGGTTCATTCGTTGGCCTCTATTTATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaagagttagacagttaaacacgaggcatatagggctgattccggtattcaattggagtcagaccttttactttcagtctcattcttctgctgttgtagtattcaatatcttccgtaacagcatccttc > 1:96138‑M1/5‑108 (MQ=255) aaGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagt > 2:316272‑M1/1‑107 (MQ=255) agtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTCGTTACTCTCTTCATTCCAATAGCATTAATTTTCTATGc < 1:293922‑M1/151‑1 (MQ=255) tAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCATTCGTCTTTCTGATTCCCGGTTAGCCTGAAACCAGAAAGTCTCAGGCtgtactgacaacacaaagttggacagttaaacaagaggcatataggtctgattccgatattcaattggagacagcccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagaatccttcagttcgcttatattact > 1:387249‑M1/1‑93 (MQ=255) ttttcaagagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTCGTTACTCTCTTCATTCCATTAGCATTAATTTTCTATGCAATATTTGTTGTAAAAATGTGACg < 2:82001‑M1/175‑1 (MQ=255) ggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTCGTTACTCTCTTCATTCCAATAGCATTAATTTTCTATGCAATAATTGTTGTAAAAATGTGACGCAAAGAGGTTTTTGGTCa > 2:88857‑M1/59‑251 (MQ=255) tttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTCGTTACTCTCTTCATTCCAATAGCATTAATTTTCTATGCAATAATTGTTGTAAAAATGTGACGCAAAGAGGTTTTTGGTCATa < 1:24752‑M1/195‑1 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTCGTTACTCTCTTCATTCCAATAGCATTAATTTTCTATGCAATAATTGTTGTAAAAATGTGACGCAAAGAGGTTTTTGGTCATAAGTAATTACCGTCAAGt < 1:370796‑M1/212‑1 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTCGTTACTCTCTTCATTCCAATAGCATTAATTTTCTATGCAATAATTGTTGTAAAAATGTGACGCAAAGAGGTTTTTGGTCATAAGTAATTACCGTCAAGTGCCg > 1:218498‑M1/35‑250 (MQ=255) ttAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaa > 1:238127‑M1/1‑27 (MQ=255) ttAGCCTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactgtaaggttccaaa < 2:238127‑M1/227‑201 (MQ=255) ccTGAAAACAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccaccacagccttatcc > 2:348829‑M1/1‑23 (MQ=255) aaaCAGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccaccacagcattatccagacaatt > 1:139827‑M1/1‑18 (MQ=255) aGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgta < 1:250120‑M1/143‑130 (MQ=255) aGAAAGTCTCAGGCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgta > 2:250120‑M1/1‑14 (MQ=255) ggCtgtactgaccccaaaacgttggaaagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccaccacagcattatccagacaattgccttttctggacat > 2:360830‑M1/1‑3 (MQ=255) ggCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccaccacagcattatccagacaattgccttttctggacat < 2:198669‑M1/251‑249 (MQ=255) ggCtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaaggttccaaagaaacactccaccacagcattatccagacaattgccttttctggacat > 1:2018‑M1/1‑3 (MQ=255) | CACCGTCCCGGAACCGCAGTTCGTAGAGCGTTTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGGGTTGTGCTTCATAGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTAAGATCTGAATTGCTAGGTTCATTCGTTGGCCTCGGTTGATAGAAATATCGGTCGGGGCCTTCGTCTTTCTGATTCCCGGTTAGCCTGAAAACAGAAAGTCTCAGGCACCCGCAGGCATCCTATGAGGTTTCCTTAGGGACGAAAATAATCACTTCACGAAATTGCGTGCTGTTTTCCAGAATTTTTCGTCATTCGGGTTAGCCAGTTTAGCCATTCGTTACTCTCTTCATTCCAATAGCATTAATTTTCTATGCAATAATTGTTGTAAAAATGTGACGCAAAGAGGTTTTTGGTCATAAGTAATTACCGTCAAGTGCCGATGACTTTCTATCAGGAGTAAACCTGGACGAGAGA > NC_000913/1491963‑1492461 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |