| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,638,058 | C→T | L455L (CTG→TTG) | creC → | sensory histidine kinase CreC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,638,058 | 0 | C | T | 98.5% | 219.6 / NA | 68 | L455L (CTG→TTG) | creC | sensory histidine kinase CreC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (27/40); minor base G (0/1); total (27/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
AATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATG > NC_000913/4637815‑4638298 | aaTTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCa > 1:278548/1‑250 (MQ=255) ggATAACGCCATCGATTTTACCCCCGAGAGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAg < 2:128489/250‑1 (MQ=255) ggATAACGCCATCGATTTTACCCCCGAGAGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTCCAgg > 2:164003/1‑251 (MQ=255) aTAACGCCATCGATTTTACCCCCGAGAGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGaa < 2:451471/251‑1 (MQ=255) gCCATCGATTTTACCCCCGAGAGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCTGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTTCTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTTCAGGAAGGTgg < 2:397841/251‑1 (MQ=255) ccATCGATTTTACCCCCGAGAGCGGTTTCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCG‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCCACGTGCAGGAAGGTGGc < 2:586895/251‑1 (MQ=255) cagcGATTTTACCCCCGAGAGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCg < 1:137671/248‑1 (MQ=255) gATTTTACCCCCGAGAGCGGTTGCATCACGCTAAGCGGCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGTATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCt < 1:328659/251‑1 (MQ=255) gATTTTACCCCCGAGAGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCt < 1:467546/251‑1 (MQ=255) aCCCCCGAGAGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGGGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTc < 1:349319/251‑1 (MQ=255) ccGAGAGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACTCGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCGGGGGTTGGCGTTCGTCAGTGAGGTCGCCCTTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGTTGGCGTGCTGGCCGCGCtt < 2:84723/251‑1 (MQ=255) cGAGAGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGCTACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTc > 1:272302/1‑251 (MQ=255) gcgagCGGTTGCATAACGCTAAGCGCCGAAGTGGATCAGGAACACGTCAAGCTTAAGGTGCTGGATACCGATAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCACGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGGGGCGTGCTGGCCTCGCTTCg > 2:86832/3‑251 (MQ=255) gagaGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCg > 1:453562/1‑251 (MQ=255) agagCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGGATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGACGTCACGTTGCGCAACGTGCAGGAAAGTGGCGTGCTGGCCTCGCTTCgc > 2:330159/1‑250 (MQ=255) gagCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGAc < 1:70100/251‑1 (MQ=255) gTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCAGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCAc > 1:95292/1‑251 (MQ=255) aCGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCATCGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACtt < 1:510401/251‑1 (MQ=255) tAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTcac > 1:524893/1‑250 (MQ=255) aaacgcCGAAGTGGATCAGGAACACTGCACGCGTAAGGTGCTGGATACCGGTAGTGGTATGCCTGACTACGCGCTTGCACGTATTTTTGAACGCTTTTACTCG‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAGCGGCGAAGGCACGTTTCGCAACGTGCATGAATGTGGCGTGCGGGCCTCTCTTCGACTTCACCGTCTCTGCACAt < 2:556241/248‑1 (MQ=255) gcgcCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTGCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGTGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCTCATAg < 2:307369/251‑1 (MQ=255) ccggaGTGGATCAGTAAAACGTCACGCTTAAGGTGCTGGATACCGTGAGGTGTATTCCTGACTACGTGCTTTCTATTATTTTTGAACGCTTTTATTCT‑TTTCCGCGTGCAAAGGGGCAAAATAGCAGCGGTCTGTGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTTACGGCGAAGTCACGTTGCGCATCGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCtt < 2:564868/247‑1 (MQ=255) ccGAAGTGGATCAAGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCtt < 1:297407/251‑1 (MQ=255) gATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAAttct < 1:391408/251‑1 (MQ=255) cAGGAACACGTCACGCTTACTGTGCTGGATACCGGTAGTGGTATTCATGACTACGCGCTTTCACGTATTTTTGCACGCTTTTACTCT‑TTGCCTCGTGCACATGGGCAAACAAGAAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTcc > 2:87775/1‑251 (MQ=255) gAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGACGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCcac > 2:161915/1‑251 (MQ=255) acGTCACGCGTAAGGTGCTGGATGCCGGTAGTTGTATTCCTGACTACGCGCTTTCACGTATTGTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATGCTTCCcacagag < 2:225415/251‑4 (MQ=255) ccGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTGTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGTGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCGTCCCACATAGTCTTc < 2:495059/250‑1 (MQ=255) cGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCg > 1:191104/1‑251 (MQ=255) gCTTAAGGTGCTGGATACCGTGAGTGGTATTCCTGACTACGCGTTTTCACGTAATTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTGGGCGTTCGTCAGTGAGGTCCCGCGGTTGTTTTACGGCGAAGGCACGTGGCGCAACTGGCAGGAAGGTGGCGTGTTGGCCTCGCCTCGACGTCACCTGCACTTCGCATATTTTTAAAGTCTGCCCACATATTCTTCGt < 2:581568/251‑1 (MQ=255) aGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCct < 1:364995/251‑1 (MQ=255) gCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGGCTTCGTATCctgct < 2:218685/250‑1 (MQ=255) ccGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGGTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACGTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCa < 2:304402/251‑1 (MQ=255) tgTGGTATTCCTGACTACGCGCTTAAACGTATTTTTGCACGCTTCTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAACCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGCTAGCCCGTTTGTTTAACGGCGACGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGCCTTCCCCGTCACTTCACATCGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCAATTGCAAAgg > 2:579300/2‑250 (MQ=255) aGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGga < 1:96857/251‑1 (MQ=255) gTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGACCGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCACCGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAgt > 2:158842/1‑248 (MQ=255) gTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGgag < 1:329053/251‑1 (MQ=255) ggTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGga > 1:408292/1‑248 (MQ=255) ggTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGGTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTCTCCTGCTGCCATTGCAAAGga < 2:408292/248‑1 (MQ=255) ggTATTCCTGACTACGCGCTTGCACGTAGTTTTGAGCGCTTTTGC‑CTGTTGCCGCGTGCAAATGGGCAAAAAAGCAGCGGTCGGGGGTTTGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCATCGTGCAGGAAGGTGGCGTGCTGGCCTCGCTGCGACGTCACCGTCACTGCAGATAGCGTCAAAGTCTTCCCACATAGTCTTCGTTTCCTGCTGCCATTGCAAAGGagaa < 2:313574/251‑1 (MQ=255) ccTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGTCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCAGCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTa < 1:351079/250‑1 (MQ=255) tGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGCGAAGACTATGt > 1:63095/1‑251 (MQ=255) ggACTACGCGCGTTCACGAATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGGTTAACGGCGAAGTCACTTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCAATGCAAAGGAGAAGACTATGt < 2:63095/250‑1 (MQ=255) gACTACGAGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGtt > 2:513357/1‑251 (MQ=255) actcgcTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGGTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGaaa < 1:573222/248‑1 (MQ=255) cgcgCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAt < 2:161416/251‑1 (MQ=255) gtgtaaCGTATTTTTGAACGATTTTACTTG‑TAGACGAGTGCAAATGGGCAAAAAAGCAGCGGGCGTGTGTTGGAGTTCGTCAGGGAGGTCGCACGGTTGTTTAACGGCGAAGTAACGTTGCGCAACGTTCAGGAAGGTGGCGAGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGACTTCGTATCCTGATGCCATTGCAAAGTAGAAGACTATGTTGAAATccca < 2:402672/246‑2 (MQ=255) tttCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGAGGTCTGGGGTTGGCGTTCGGCAGAGAGGTCGCCCGTTTGTTTAACGGCGCAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCAATGGCAAAGGAGAAGACTATGTATAAATccccc > 2:73148/1‑251 (MQ=255) cACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTg < 1:275130/251‑1 (MQ=255) aCGTATTTTTGAACTCTGTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGTCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGt < 1:490289/251‑1 (MQ=255) tGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAACGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTACACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGaaa < 2:401149/250‑1 (MQ=255) cgcattgtctcgttGCCGCGTGCAAAGGGGCAAAAAAGCAGCGGTTTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTCTAACGGCGAAGTCACGTTGCGCAACGTGCAGTAAGGTGGCGTGCTGGACTCGTTTCGACTTTACTGGCACCGCACATAGCTACAAATTCTGCCCACATAGTCTTCGTATCCTGCTTCTAGTGCAAAGGAGAAGAATATGTTGAAATCCCACTTGTTCCGGAAAATGAc < 2:407929/239‑1 (MQ=255) ttACTCT‑TTGCCTCGTGCAAATGGGCAAAATAGCAGCGGTATGGGGTTGGCGTTCGTTAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGACACGTTGCGCAACGTGCAGGAAGGAGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTAGTATCCTGCTGCCATTGAACAGGTGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAATTGACTAGc > 2:554437/1‑250 (MQ=255) ttACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGcc > 2:222604/1‑251 (MQ=255) aCTCT‑TTGCCTCGTGCAGATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTg > 1:404009/1‑251 (MQ=255) ttGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGttt < 1:23305/249‑1 (MQ=255) tGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTgg < 1:86832/250‑1 (MQ=255) tGCACATGGGCAAAAAAGCAGCGGACTGGGGTGGGCGTTCGTCAGTGAGATCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCATCGTGCGGGAAGGTGGCGTGCCGGCCTCGCTTCGACTTCACCGTCACTTCCCATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCACTTGCAAAGGAGCAGACTATGTTGAAATCACACCTGTTCTGGAAAAGGACTAGCCTGATTggggacgtat > 2:214760/1‑243 (MQ=255) gCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTAtt < 1:5906/251‑1 (MQ=255) cagcGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAACTGACTAGCCTGATTGGTGCAGTATTGCTGTTGTTAATTCCg > 1:381386/1‑250 (MQ=255) tGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTAATTCCGATAATGCTGATTCg < 1:419055/250‑1 (MQ=255) cGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTAATTCCGATAATGCTGATTCGGCAg < 2:170721/251‑1 (MQ=255) cGTTCGTCAGTGACATAGCCAGATTGTTTAACGGCTAAGACACGTTGCTCAACGCGAAGGAAGGTGGCGTGCTAGCCTCGCTTCGACTTCACCGTCACTTCACCTAGCTTCAGATTCTTACCACCTAGCCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCACCCTATTCTGGAAACTGACTAGCCTGTTTGTTGCTGTATTGCTgttgttatttcagctaaagatgtttcggc > 2:289956/1‑226 (MQ=255) cAGTGAAGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTAATTCCGATAATGCTGATTCGGCAGGTGagtg > 2:462097/1‑248 (MQ=255) aGGTCGCCCGTTTGTTTAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTAATTCCGATAATGCTGATTCGGCAGGTGATTGTCGa > 1:196316/1‑250 (MQ=255) gtttgtttAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTAATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGAt > 1:547545/1‑251 (MQ=255) gtttgtttAACGGCGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTAATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGAt > 2:177907/1‑251 (MQ=255) cGAAGTCACGTTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTAATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGAtg < 1:161915/251‑1 (MQ=255) | AATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCT‑TTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATG > NC_000913/4637815‑4638298 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |