New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3653230NA (NA)75 (1.300) 68/492 0.1 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 3927267 0 (0.000)coding (113/993 nt) asnA asparagine synthetase A

TCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGTGCAGGTAAAAGTGAAAGCTCTGCCTGATGCCCAGTTCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCAGTGGGACTGGGAA  >  NC_000913/3927030‑3927514
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                       
tcattcTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaac                                                                                                                                                                                                                                            <  1:79159‑M2/251‑14 (MQ=255)
   ttcTATTTTAGCCTTCTTTTTTAATGAATCCAGAGGGCGTTAGGCTTTTTTTTGATTGATTATTGCCTGTATGTCGGTTTTTGTTGATTAATCATAAGAAAAAGGACGCAGGAGTATAAAAAATGAAAACCGATTACCTTGACAAACAACGTCAAATTAGATTCGTAAAATCTCACTTTTCTCGTCCACTGGAAGAACGTCTGGGGCTGATAGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaaca                                                                                                                                                                                                                                           <  2:274725‑M2/249‑15 (MQ=255)
            aGCCTTCTTTTTTAATGAATCAAAAGTTAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgata                                                                                                                                                                                                                                >  2:152788‑M2/1‑226 (MQ=255)
                     ttttAATGAATCAAAAGAGAGTTAGGCTTTTTATTGAATGATTCTTGCATGTGAGTCGGTTTTTGTTGCTTAATCATAAGAAACAGGACGCCGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGCCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggcaggtgcgaacaagtccctgatatgagatcat                                                                                                                                                                                                                       <  2:585443‑M2/251‑35 (MQ=255)
                             aaTCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtc                                                                                                                                                                                                                <  1:470816‑M2/250‑42 (MQ=255)
                                       gAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATAATAAGCAACAGGCCGCAGGAGTATAAAAAATGTAAACCGCTTACATTGCCCAACAACGTCAAATTAGATTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggcaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc                                                                                                                                                                                                      <  2:304154‑M2/250‑52 (MQ=255)
                                          ttAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat                                                                                                                                                                                                    <  2:189757‑M2/249‑54 (MQ=255)
                                                    tATTGAATGATTATTGCGTGCGTGACGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGCAAACCGCTTACATTGCCAACCAACGTCCAATTCGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGTAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTCGtgaaggtgcgaccaattccctgatctgagatcatgtttgtcatctggagccatagaacagggttc                                                                                                                                                                                        <  2:101181‑M2/251‑66 (MQ=255)
                                                        gAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGAAGCAGGAGTATAAAAAATGAAAACAGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc                                                                                                                                                                                     <  1:133597‑M2/250‑69 (MQ=255)
                                                             attattGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt                                                                                                                                                                               <  1:230587‑M2/251‑75 (MQ=255)
                                                              ttattGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc                                                                                                                                                                              <  1:19088‑M2/251‑76 (MQ=255)
                                                                attGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                                                                                                                                                                            <  2:81924‑M2/251‑78 (MQ=255)
                                                                attGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca                                                                                                                                                                             >  1:514942‑M2/1‑174 (MQ=255)
                                                                   gCATGTGTGTCGGATTTTGTTGCTTAATCATAAGCAACAGGACGCCGGAGCATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCACATTAGCTTCGTGAACTCTCCCTTTTCTCGTCACCTGGAGGAACGACTGGGGCTGATCGCAGTCCCGGCGCCGATTCTTAGggaaggtgcgaacacgtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatca                                                                                                                                                                          <  1:387470‑M2/250‑80 (MQ=255)
                                                                    cATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac                                                                                                                                                                        <  1:253266‑M2/251‑82 (MQ=255)
                                                                    aatGTGTGTCAGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTGACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCGGGGGCTGCTCGAAGTCCAGTCGCCGATTCTTAGggaaggtgctaacatgtccctgatatgagatcatgtttgtcatctgtagccatagatcaggggtcatcatgtgtcatcaac                                                                                                                                                                        >  2:247590‑M2/2‑170 (MQ=255)
                                                                      tgtgtgTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTCCATTGCAAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt                                                                                                                                                                      <  1:353415‑M2/251‑84 (MQ=255)
                                                                           gtCGGTTTTTGGTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt                                                                                                                                                                 >  1:142447‑M2/1‑163 (MQ=255)
                                                                             cGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAACTGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTAAACTGGAAGAACGTCTGGGGCTGATCGACGTCCAGGCGCCGATTCTTAGggaaggcgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaccagggttcatcatgagtcatcaacttaccttcg                                                                                                                                                               <  1:296759‑M2/251‑91 (MQ=255)
                                                                                 ttttGTTGCTTACTCATAAGCAACAGGACGCAGGAGTATAAAATATGAAAACCGATTACATTGACAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaagatgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcaggagtcatcaaattacctacgccg                                                                                                                                                            <  2:130323‑M2/250‑94 (MQ=255)
                                                                                     gttgCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt                                                                                                                                                       <  1:458715‑M2/251‑99 (MQ=255)
                                                                                        gCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                                                                                                                                    >  2:316076‑M2/1‑150 (MQ=255)
                                                                                        gCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtga                                                                                                                                                     >  1:482291‑M2/1‑150 (MQ=255)
                                                                                            tatCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggagcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc                                                                                                                                                 <  2:499211‑M2/249‑105 (MQ=255)
                                                                                                aTAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcag                                                                                                                                            >  1:39742‑M2/1‑142 (MQ=255)
                                                                                                aTAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc                                                                                                                                              <  2:2621‑M2/249‑108 (MQ=255)
                                                                                                    gCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaag                                                                                                                                        >  2:497077‑M2/1‑138 (MQ=255)
                                                                                                         aGGACGCCGGGGTATAAAAAATGACAACCGCTTCCATTGCCAAACAACGTCAAATTAACTTCGTGAAATCTCACTTTTCTCGTCAAATGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagcacagggttcatcatgagacatcaacttaccttcgccgacagtgaattcagcagtaagcgccg                                                                                                                                   <  2:570755‑M2/251‑119 (MQ=255)
                                                                                                          ggACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAAAAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaaagtgaattcagcagtaagcgccgt                                                                                                                                  <  1:457115‑M2/251‑120 (MQ=255)
                                                                                                                           aaaTGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgcattcagcagtaagcgccgtcagaccagaaaag                                                                                                                     <  2:128049‑M2/247‑133 (MQ=255)
                                                                                                                            aaTGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagcaaagagatt                                                                                                                <  2:546527‑M2/251‑138 (MQ=255)
                                                                                                                               gAAAACCGCTTACATTGCCCAACAACGTCAACTTAGCTTCGTGCAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc                                                                                                             <  1:158095‑M2/251‑141 (MQ=255)
                                                                                                                                      gCTTAAATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCGGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtccc                                                                                                      >  2:9833‑M2/1‑104 (MQ=255)
                                                                                                                                       cTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg                                                                                                     <  1:325721‑M2/251‑149 (MQ=255)
                                                                                                                                         tACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc                                                                                                    <  1:75082‑M2/250‑150 (MQ=255)
                                                                                                                                          aCATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcat                                                                                                  <  1:220232‑M2/251‑152 (MQ=255)
                                                                                                                                            tttgCCAACCAACGTCAAATTGGCTTCGTGAAATCTCCCTTTTCTAGTCAACTGGAAGAACGTCTCGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggcgcgcacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggatcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatgg                                                                                                <  2:299893‑M2/250‑154 (MQ=255)
                                                                                                                                            aTTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatgg                                                                                                <  1:243890‑M2/251‑154 (MQ=255)
                                                                                                                                               gCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagc                                                                                             <  1:399262‑M2/251‑157 (MQ=255)
                                                                                                                                                  aaaCAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGACGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagc                                                                                             <  1:147106‑M2/248‑157 (MQ=255)
                                                                                                                                                    acaacGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTACAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagatt                                                                                        <  2:333911‑M2/251‑162 (MQ=255)
                                                                                                                                                        cGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagacaagagattttcttgtcccgcctggcgcagcttctgc                                                                                    <  1:13971‑M2/251‑166 (MQ=255)
                                                                                                                                                           cAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTACAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccat                                                                                 <  2:394810‑M2/251‑169 (MQ=255)
                                                                                                                                                           cAAATTAGCTTCGGTAAATCTCACTTTTCTCGTCAACTGTAAGAACGTCTGGGGCTTATCGAAGTCCAGGCGCCGATGCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctagggccatagaacagggttcatcatgagtcatcaacttaccttcgccgacattgaattcatcaggaagcgccgtcagaccagaaaagagattttcttgttccgcatggagcagattttgccat                                                                                 >  2:66170‑M2/1‑83 (MQ=255)
                                                                                                                                                            aaaTTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccttcagaccataaaagagattttcttgtcccgcatggagcagattctgccatg                                                                                >  1:366539‑M2/1‑82 (MQ=255)
                                                                                                                                                            aaaTTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatg                                                                                >  2:91115‑M2/1‑82 (MQ=255)
                                                                                                                                                              aTTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggc                                                                              <  2:313341‑M2/251‑172 (MQ=255)
                                                                                                                                                               ttAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGCTCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga                                                                                                                                                           <  2:481590‑M2/173‑95 (MQ=255)
                                                                                                                                                               ttAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGGCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga                                                                                                                                                           >  1:481590‑M2/1‑79 (MQ=255)
                                                                                                                                                                 aGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaa                                                                            >  2:79159‑M2/1‑77 (MQ=255)
                                                                                                                                                                      cGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGTCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacat                                                                       >  2:76441‑M2/1‑72 (MQ=255)
                                                                                                                                                                         gAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggt                                                                    >  1:450927‑M2/1‑69 (MQ=255)
                                                                                                                                                                                 aCTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgctatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcat                                                           <  1:585159‑M2/251‑191 (MQ=255)
                                                                                                                                                                                    tttCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttttcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaatcgccgtcagaccagaaaagagatttgcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcg                                                         >  1:28541‑M2/1‑58 (MQ=255)
                                                                                                                                                                                         cGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGAGCCGATTCTTAGggaaggtgcgaacaagtcccggatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggcgcagagtctgccatggcataacatggtggaagtcatcgagcc                                                     >  2:158135‑M2/1‑53 (MQ=255)
                                                                                                                                                                                         cGTCAACTGGAAGAACGGCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagcc                                                     >  2:470816‑M2/1‑53 (MQ=255)
                                                                                                                                                                                            cAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttt                                                 >  1:81924‑M2/1‑50 (MQ=255)
                                                                                                                                                                                              aCTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttac                                              <  1:593574‑M2/251‑204 (MQ=255)
                                                                                                                                                                                               cTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg                                                                                                                                                      <  1:266284‑M2/146‑100 (MQ=255)
                                                                                                                                                                                               cTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcagctgtagccatagaacagggttcatcaggagtcatcaacgtaccttcgccgacagtg                                                                                                                                                      >  2:266284‑M2/1‑47 (MQ=255)
                                                                                                                                                                                                        cGTCTGATGCTGTTCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgcacaagtccctgatatgagctcatgtttgtcatctggagccatagaacagagttcatcatgagtaatcaacttaccttcgccgacagagaattcagcagtaagcgccgtcagacaagaaaagagattttcttgtcccgcatggagcagcttcagccatggcaaaacatggtggaagtcatcgagcagttttaccccaaggatg                                    <  2:226532‑M2/251‑214 (MQ=255)
                                                                                                                                                                                                         gTCTGGGGCTGATCGAAGTCCAGGAGCCGATTCTTAGggcaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctgg                                   <  2:224573‑M2/251‑215 (MQ=255)
                                                                                                                                                                                                            tGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggta                                 <  2:287240‑M2/250‑217 (MQ=255)
                                                                                                                                                                                                             tgggaagatcgaaGTACAGACGCCGATTCTTCGggacggcgcgaacaagtccctgatatgagatcgtgtttgacatctggagccatagaacagggttcatcatgcgtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcctcgagcggttttaccccaaggctggtaat                               <  2:431451‑M2/245‑219 (MQ=255)
                                                                                                                                                                                                             ggggCTGATCGAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggt                                  >  1:189757‑M2/1‑33 (MQ=255)
                                                                                                                                                                                                                       gAAGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttgccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgac                     >  1:313341‑M2/1‑23 (MQ=255)
                                                                                                                                                                                                                         aGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcctgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtaatcgagccgtttaccccaaggctggtaatggccggcgacctt                   <  1:346644‑M2/251‑231 (MQ=255)
                                                                                                                                                                                                                         aGTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgacct                   <  1:302758‑M2/251‑231 (MQ=255)
                                                                                                                                                                                                                          gTCCAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagaacatgtttgtcatctggagccatagaacagggttcatcatgagtcagcaacataccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgacctt                  >  1:101181‑M2/1‑20 (MQ=255)
                                                                                                                                                                                                                            ccAGTCGCCGATTTTTAGggaaggtgcgaacaagcccctgatatgagatcatgtttgtcatcttgagccatagaacagggttcatcatgagtcatcaacttacctgcgccgacagtgaattcagctgtaagcgccgtcagaccagaaaatagattttcttgtcccgcatggtgcagagtctgccagggcaaaacatggtggaagtcatcgagccgtgttaccccaaggctggtaatgtccgtcgatcttat                >  2:397759‑M2/1‑18 (MQ=255)
                                                                                                                                                                                                                             cAGGCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggatggtaatggccggcgaccttatc               <  2:184190‑M2/251‑235 (MQ=255)
                                                                                                                                                                                                                               ggCGCCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaccatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccg             <  1:129587‑M2/251‑237 (MQ=255)
                                                                                                                                                                                                                                  gcCGATTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagcacagggttcatcatgagtcatcaactaaccttcgccgacagtgaattcagcagtaagcgccgtaagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgcccttctccgctg          <  1:372270‑M2/251‑240 (MQ=255)
                                                                                                                                                                                                                                      aTTCTTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgctggaa       <  1:14483‑M2/250‑243 (MQ=255)
                                                                                                                                                                                                                                          ctaGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgctggaaaccat  <  1:427105‑M2/250‑248 (MQ=255)
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                       
TCATTCTATTTTAGCCTTCTTTTTTAATGAATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGTGCAGGTAAAAGTGAAAGCTCTGCCTGATGCCCAGTTCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCAGTGGGACTGGGAA  >  NC_000913/3927030‑3927514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.