| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,926,543 | 2 bp→TT | coding (236‑237/1365 nt) | ppnN → | nucleotide 5'‑monophosphate nucleosidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,926,543 | 0 | C | T | 96.7% | 84.9 / NA | 30 | P79L (CCC→CTT) | ppnN | nucleotide 5'‑monophosphate nucleosidase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (16/13); minor base G (0/1); total (16/14) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 | |||||||||||
| * | NC_000913 | 2,926,544 | 0 | C | T | 100.0% | 90.0 / NA | 30 | P79L (CCC→CTT) | ppnN | nucleotide 5'‑monophosphate nucleosidase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (16/14); total (16/14) | |||||||||||
TTCTTGATTACACATATTAGCCCGCTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATCCATAACACCGTTCGTTTTCCCAACCTGAATCTCGACAACTCCGTCCACATCACTAACCTGGTCTTTTCCATCTTGCGTAACGCTCGCGCGCTGCATGTGGGTGAAGCGCCAAATATGGTGGTCTGCTGGGGCGGTC > NC_000913/2926305‑2926776 || ttCTTGATTACACATATTAGCCCGCTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGAAACTGTTCACTTGCCGTACTGAACTCCGGAAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATATTCCGGAAGAGGc > 1:209144/1‑251 (MQ=255) acacATATTAGCCCGCTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCg > 2:213844/1‑250 (MQ=255) ataatggctcGCTTGGCTCCAGGGATATTTTGTCGCTGCGGGAAGGGGACATGCAAAAACGCTCCGCCAGCATCGACCTCTATCAACTGTGTCGCAACTGTTCACTTGCCGGACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGTAACTGATTAATCGTCCGGAAGAGGCTTTTGTCGATggg < 1:171051/242‑1 (MQ=255) gCCCGTTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGGGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGAatt < 1:28879/251‑1 (MQ=255) gCCCGCTTGGCTCCATGGATAGGTTTTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTTATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGAatt < 1:38849/251‑1 (MQ=255) tCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTACAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGGATTTTTCGCGCttt > 2:36377/1‑251 (MQ=255) aGCTGGAAGTGGATATGCTTAAACGCACCGCCCGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCATGCCAACTTGTTcgcg > 2:188594/1‑251 (MQ=255) aGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTGTGCAGGCCAACTTGTTcgcg < 1:213844/251‑1 (MQ=255) gtaaGTGGATATGCTAAAACTCACCGCCAGCATCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGGTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACTCGGCGTAAATCTGGAACTGATTAATCTTCCGGAAGAGTCTTTTGTCGATTGGCGAATTATTCGCTCTTTGCGGGCCAACGTGTTCGCGGTcc < 2:38996/249‑1 (MQ=255) aaGTGGATATGCTTAAACGCACAGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTg > 2:194946/1‑251 (MQ=255) gtatatgttaaaccgccccGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCGCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAAGCTTCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGt < 2:28831/233‑1 (MQ=255) atatGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTATCGTTTTGAAAATTACGATATTAAAGTCTTGAGCCGTGAAAGAGGACTAAAACTGGAACTGATTAATCTTCCGGATGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGAc > 1:151090/1‑251 (MQ=255) atGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGACCTGATTAATCTTCCGGAAGAGGCTTTTGTCGCTGGGCGAATTATTCGCGCTTTGCAGGCCCACTTGTTCGCGGTCCTGCGTGACAt > 2:240387/1‑251 (MQ=255) aaccGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCtt < 2:243839/248‑1 (MQ=255) gACCTCTATCCACTGTTACGCAACTGTTCACTTGCCGCACTGAACTCCGCTAGTTTGACCGATAACAGCAACGCTTTACTGTCTCGTTTTGAAACTTTCGATCTTCACGTCTTGCGCCGTGCACGCGCCGTAAAGCTGGAACTGATTAATCTTCCGGAAGCGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCTACTTTTTTGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATcc > 2:42815/1‑250 (MQ=255) gACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATcc > 1:248147/1‑250 (MQ=255) atATCAACTGTTTCGGAACTGTTCACTTGCCGTATTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGACTCGGTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAACGCTGGAACTGATTAATCTTCGGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGACAACATGTTCGCGGTCCTGCGTGACATTGTCTTCGTTTACGGGCAAATCAATaaa > 2:219360/2‑249 (MQ=255) aaCTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCGTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATCCATAACACcgtt < 2:92496/251‑1 (MQ=255) aaCTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTAGTTTTGAACATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGCTTACTCTTCCGGAAGAGGCTTTTGTCGCTGGGCGAATTATTCGCGCTTTGCCGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATCCATAACACcgtt > 1:194416/1‑251 (MQ=255) aCTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTGTTGTCGATGGGCGAATTATTCGCGCTGTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATCCATAACACcgttc < 2:158558/251‑1 (MQ=255) aaCTGTTCACTTGCCGTACTGCACTCCGGTAGATTGACCGATAACAGCAACGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATCCATAACACCGTTCGTTTTCCCa > 1:249195/1‑250 (MQ=255) tCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATCCATAACACCGTTCGTTTTCCCAACCTGa > 1:90167/1‑250 (MQ=255) cGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATCCATAACACCGTTCGTTTTCCCAACCTGAATCTCGAc > 1:142755/1‑250 (MQ=255) tGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATCCATAACACCGTTCGTTTTCCCAACCTGAATCTCGACAACTcc > 2:163035/1‑251 (MQ=255) gAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATCCATAACACCGTTCGTTTTCCCAACCTGAATCTCGACAACTcc < 1:145267/250‑1 (MQ=255) cAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATCCATAACACCGTTCGTTTTCCCAACCTGAATCTCGACAACTCCGTCCACATCACTAACCTGGTCtttt > 1:241622/1‑251 (MQ=255) cGATATTAACGTCTGGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATCCATAACACCGTTCGTTTTCCCAACCTGAATCTCGACAACTCCGTCCACATCACTAACCTGGTCTTTTCCATCTTGCGGAACGCTCGCGCGCTGCAtgtg < 1:240387/250‑1 (MQ=255) cgcCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCGTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATCCATAACACCGTTCGTTTTCCCAACCTGAATCTCGACAACTCCGTCCACATCACTAACCTGGTCTTTTCCATCTTGCGTAACGCTCGCGCGCTGCATGTGGGTGAAGCGCCAAatat < 1:216106/251‑1 (MQ=255) gAACGCGGCGTAAAGCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGGCGAGGGGCGAATTATTCGCGCTTTGCAGGCCTACTTGTTCGCGGTCCTGCGTGACATTCGCTTCGTTTACGGGCAAATCCATAACACCGTTCGTGTTCCCAATCTGAATCTCGACAACTCCGTCCACATCAATAACCTGTTCTTTTCCATATTGCGTAACGCTCGCGCGCGGCATGTGGGTGAAGCGTCAAATATggtggt < 2:174174/251‑1 (MQ=255) gCTGGAACTGATTAATCTTCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATCCATAACACCGTTCGTTTTCCCAACCTGAATCTCGACAACTCCGTCCACATCACTAACCTGGTCTTTTCCATCTTGCGTAACGCTCGCGCGCTGCATGTGGGTGAAGCGCCAAATATGGTGGTCTTCTGGGGAGGTc < 1:256599/251‑1 (MQ=255) || TTCTTGATTACACATATTAGCCCGCTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATCCATAACACCGTTCGTTTTCCCAACCTGAATCTCGACAACTCCGTCCACATCACTAACCTGGTCTTTTCCATCTTGCGTAACGCTCGCGCGCTGCATGTGGGTGAAGCGCCAAATATGGTGGTCTGCTGGGGCGGTC > NC_000913/2926305‑2926776 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |